RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 ATMQ13315 3056 aa3.31□□□□□ -1.88
ITGA1-203ENST00000504669 ZANQ9Y493 2812 aa3.3□□□□□ -1.88
ITGA1-203ENST00000504669 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
ITGA1-203ENST00000504669 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
ITGA1-203ENST00000504669 BOD1L1Q8NFC6 3051 aa3.29□□□□□ -1.88
ITGA1-203ENST00000504669 MT1FP04733 61 aa3.29□□□□□ -1.88
ITGA1-203ENST00000504669 FLNCQ14315 2725 aa3.29□□□□□ -1.88
ITGA1-203ENST00000504669 TACC2O95359 2948 aa3.29□□□□□ -1.88
ITGA1-203ENST00000504669 VPS13CQ709C8 3753 aa3.29□□□□□ -1.88
ITGA1-203ENST00000504669 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
ITGA1-203ENST00000504669 TRRAPQ9Y4A5 3859 aa3.28□□□□□ -1.88
ITGA1-203ENST00000504669 SPEGQ15772 3267 aa3.28□□□□□ -1.88
ITGA1-203ENST00000504669 DMDP11532 3685 aa3.27□□□□□ -1.89
ITGA1-203ENST00000504669 NF1P21359 2839 aa3.26□□□□□ -1.89
ITGA1-203ENST00000504669 ANK2Q01484 3957 aa3.26□□□□□ -1.89
ITGA1-203ENST00000504669 CRYBG3Q68DQ2 2970 aa3.26□□□□□ -1.89
ITGA1-203ENST00000504669 MT1XP80297 61 aa3.26□□□□□ -1.89
ITGA1-203ENST00000504669 LAMA3Q16787 3333 aa3.25□□□□□ -1.89
ITGA1-203ENST00000504669 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
ITGA1-203ENST00000504669 FRAS1Q86XX4 4008 aa3.23□□□□□ -1.89
ITGA1-203ENST00000504669 ADGRG4Q8IZF6 3080 aa3.22□□□□□ -1.89
ITGA1-203ENST00000504669 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
ITGA1-203ENST00000504669 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
ITGA1-203ENST00000504669 BRCA2P51587 3418 aa3.2□□□□□ -1.9
ITGA1-203ENST00000504669 VWFP04275 2813 aa3.19□□□□□ -1.9
ITGA1-203ENST00000504669 ASPMQ8IZT6 3477 aa3.19□□□□□ -1.9
ITGA1-203ENST00000504669 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
ITGA1-203ENST00000504669 NIPBLQ6KC79 2804 aaeCLIP3.18□□□□□ -1.9
ITGA1-203ENST00000504669 PDZD2O15018 2839 aa3.18□□□□□ -1.9
ITGA1-203ENST00000504669 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
ITGA1-203ENST00000504669 SVEP1Q4LDE5 3571 aa3.17□□□□□ -1.9
ITGA1-203ENST00000504669 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
ITGA1-203ENST00000504669 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
ITGA1-203ENST00000504669 SMG1Q96Q15 3661 aaKnown RBP3.15□□□□□ -1.9
ITGA1-203ENST00000504669 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.91
ITGA1-203ENST00000504669 BSNQ9UPA5 3926 aa3.14□□□□□ -1.91
ITGA1-203ENST00000504669 HSPG2P98160 4391 aa3.13□□□□□ -1.91
ITGA1-203ENST00000504669 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
ITGA1-203ENST00000504669 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
ITGA1-203ENST00000504669 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
ITGA1-203ENST00000504669 APOBP04114 4563 aaKnown RBP3.13□□□□□ -1.91
ITGA1-203ENST00000504669 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
ITGA1-203ENST00000504669 DCHS2Q6V1P9 2916 aa3.12□□□□□ -1.91
ITGA1-203ENST00000504669 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
ITGA1-203ENST00000504669 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
ITGA1-203ENST00000504669 LYSTQ99698 3801 aa3.1□□□□□ -1.91
ITGA1-203ENST00000504669 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
ITGA1-203ENST00000504669 MT1LQ93083 61 aa3.09□□□□□ -1.91
ITGA1-203ENST00000504669 CSMD2Q7Z408 3487 aa3.09□□□□□ -1.91
ITGA1-203ENST00000504669 LAMA5O15230 3695 aa3.09□□□□□ -1.91
ITGA1-203ENST00000504669 HECTD4Q9Y4D8 3996 aa3.09□□□□□ -1.92
ITGA1-203ENST00000504669 DYNC1H1Q14204 4646 aaKnown RBP3.07□□□□□ -1.92
ITGA1-203ENST00000504669 CUBNO60494 3623 aa3.07□□□□□ -1.92
ITGA1-203ENST00000504669 CDH23Q9H251 3354 aa3.07□□□□□ -1.92
ITGA1-203ENST00000504669 SPRR2EP22531 72 aa3.07□□□□□ -1.92
ITGA1-203ENST00000504669 SPRR2BP35325 72 aa3.07□□□□□ -1.92
ITGA1-203ENST00000504669 SPRR2AP35326 72 aa3.07□□□□□ -1.92
ITGA1-203ENST00000504669 OTOGQ6ZRI0 2925 aa3.06□□□□□ -1.92
ITGA1-203ENST00000504669 MT1EP04732 61 aa3.05□□□□□ -1.92
ITGA1-203ENST00000504669 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
ITGA1-203ENST00000504669 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
ITGA1-203ENST00000504669 MT1BP07438 61 aa3.03□□□□□ -1.93
ITGA1-203ENST00000504669 FBN3Q75N90 2809 aa3.02□□□□□ -1.93
ITGA1-203ENST00000504669 MYO15AQ9UKN7 3530 aa3.02□□□□□ -1.93
ITGA1-203ENST00000504669 PKD1L1Q8TDX9 2849 aa3.02□□□□□ -1.93
ITGA1-203ENST00000504669 CSMD3Q7Z407 3707 aa3.01□□□□□ -1.93
ITGA1-203ENST00000504669 FBN2P35556 2912 aa3.01□□□□□ -1.93
ITGA1-203ENST00000504669 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
ITGA1-203ENST00000504669 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
ITGA1-203ENST00000504669 ZNF469Q96JG9 3925 aaPredicted RBP2.98□□□□□ -1.93
ITGA1-203ENST00000504669 PKD1P98161 4303 aa2.98□□□□□ -1.93
ITGA1-203ENST00000504669 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
ITGA1-203ENST00000504669 SPRR2DP22532 72 aa2.96□□□□□ -1.94
ITGA1-203ENST00000504669 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
ITGA1-203ENST00000504669 MT1AP04731 61 aa2.94□□□□□ -1.94
ITGA1-203ENST00000504669 VPS13BQ7Z7G8 4022 aa2.94□□□□□ -1.94
ITGA1-203ENST00000504669 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
ITGA1-203ENST00000504669 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
ITGA1-203ENST00000504669 EYSQ5T1H1 3165 aa2.91□□□□□ -1.94
ITGA1-203ENST00000504669 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.94
ITGA1-203ENST00000504669 FAT1Q14517 4588 aa2.89□□□□□ -1.95
ITGA1-203ENST00000504669 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
ITGA1-203ENST00000504669 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
ITGA1-203ENST00000504669 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
ITGA1-203ENST00000504669 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
ITGA1-203ENST00000504669 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
ITGA1-203ENST00000504669 MT1MQ8N339 61 aa2.83□□□□□ -1.96
ITGA1-203ENST00000504669 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
ITGA1-203ENST00000504669 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
ITGA1-203ENST00000504669 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
ITGA1-203ENST00000504669 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
ITGA1-203ENST00000504669 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
ITGA1-203ENST00000504669 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
ITGA1-203ENST00000504669 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
ITGA1-203ENST00000504669 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
ITGA1-203ENST00000504669 TNXBP22105 4242 aa2.76□□□□□ -1.97
ITGA1-203ENST00000504669 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
ITGA1-203ENST00000504669 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
ITGA1-203ENST00000504669 LRP1BQ9NZR2 4599 aa2.73□□□□□ -1.97
ITGA1-203ENST00000504669 MUC17Q685J3 4493 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms