RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TNXBP22105 4242 aa7.69□□□□□ -1.18
SNF8-203ENST00000504000 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
SNF8-203ENST00000504000 ROMO1P60602 79 aa7.64□□□□□ -1.19
SNF8-203ENST00000504000 XP32Q5T750 250 aa7.64□□□□□ -1.19
SNF8-203ENST00000504000 S4R3F8 94 aa7.63□□□□□ -1.19
SNF8-203ENST00000504000 HSPG2P98160 4391 aa7.61□□□□□ -1.19
SNF8-203ENST00000504000 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
SNF8-203ENST00000504000 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
SNF8-203ENST00000504000 RYR2Q92736 4967 aa7.58□□□□□ -1.2
SNF8-203ENST00000504000 Q5VSD8 79 aa7.55□□□□□ -1.2
SNF8-203ENST00000504000 DMBT1Q9UGM3 2413 aaPredicted RBP7.52□□□□□ -1.21
SNF8-203ENST00000504000 A0A0D9SG42 100 aa7.47□□□□□ -1.21
SNF8-203ENST00000504000 P0C880 135 aa7.47□□□□□ -1.21
SNF8-203ENST00000504000 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
SNF8-203ENST00000504000 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
SNF8-203ENST00000504000 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
SNF8-203ENST00000504000 MYCBP2O75592 4640 aa7.4□□□□□ -1.23
SNF8-203ENST00000504000 M0QZ58 72 aa7.38□□□□□ -1.23
SNF8-203ENST00000504000 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
SNF8-203ENST00000504000 H3BS24 57 aa7.36□□□□□ -1.23
SNF8-203ENST00000504000 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
SNF8-203ENST00000504000 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
SNF8-203ENST00000504000 RYR1P21817 5038 aa7.32□□□□□ -1.24
SNF8-203ENST00000504000 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
SNF8-203ENST00000504000 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
SNF8-203ENST00000504000 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
SNF8-203ENST00000504000 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
SNF8-203ENST00000504000 LPAP08519 4548 aa7.2□□□□□ -1.26
SNF8-203ENST00000504000 LRP2P98164 4655 aa7.17□□□□□ -1.26
SNF8-203ENST00000504000 RYR3Q15413 4870 aa7.16□□□□□ -1.26
SNF8-203ENST00000504000 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
SNF8-203ENST00000504000 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
SNF8-203ENST00000504000 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
SNF8-203ENST00000504000 R4GN34 69 aa7.08□□□□□ -1.28
SNF8-203ENST00000504000 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
SNF8-203ENST00000504000 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
SNF8-203ENST00000504000 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.31
SNF8-203ENST00000504000 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
SNF8-203ENST00000504000 KRTAP19-2Q3LHN2 52 aa6.87□□□□□ -1.31
SNF8-203ENST00000504000 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
SNF8-203ENST00000504000 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
SNF8-203ENST00000504000 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
SNF8-203ENST00000504000 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
SNF8-203ENST00000504000 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
SNF8-203ENST00000504000 J3QL48 77 aa6.75□□□□□ -1.33
SNF8-203ENST00000504000 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
SNF8-203ENST00000504000 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SNF8-203ENST00000504000 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
SNF8-203ENST00000504000 HERC2O95714 4834 aa6.55□□□□□ -1.36
SNF8-203ENST00000504000 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
SNF8-203ENST00000504000 TNP1P09430 55 aa6.53□□□□□ -1.36
SNF8-203ENST00000504000 HERC1Q15751 4861 aa6.51□□□□□ -1.37
SNF8-203ENST00000504000 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
SNF8-203ENST00000504000 MUC2Q02817 5179 aa6.43□□□□□ -1.38
SNF8-203ENST00000504000 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
SNF8-203ENST00000504000 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
SNF8-203ENST00000504000 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
SNF8-203ENST00000504000 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
SNF8-203ENST00000504000 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
SNF8-203ENST00000504000 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
SNF8-203ENST00000504000 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
SNF8-203ENST00000504000 MT1HP80294 61 aa6.17□□□□□ -1.42
SNF8-203ENST00000504000 M0R2T5 61 aa6.15□□□□□ -1.43
SNF8-203ENST00000504000 KRTAP19-8Q3LI54 63 aa6.12□□□□□ -1.43
SNF8-203ENST00000504000 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
SNF8-203ENST00000504000 MT2AP02795 61 aa6.11□□□□□ -1.43
SNF8-203ENST00000504000 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
SNF8-203ENST00000504000 MT1FP04733 61 aa6.1□□□□□ -1.43
SNF8-203ENST00000504000 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.44
SNF8-203ENST00000504000 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
SNF8-203ENST00000504000 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
SNF8-203ENST00000504000 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.44
SNF8-203ENST00000504000 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.44
SNF8-203ENST00000504000 MT1BP07438 61 aa5.96□□□□□ -1.45
SNF8-203ENST00000504000 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
SNF8-203ENST00000504000 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
SNF8-203ENST00000504000 MT1XP80297 61 aa5.94□□□□□ -1.46
SNF8-203ENST00000504000 LCE2BO14633 110 aa5.93□□□□□ -1.46
SNF8-203ENST00000504000 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
SNF8-203ENST00000504000 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
SNF8-203ENST00000504000 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
SNF8-203ENST00000504000 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
SNF8-203ENST00000504000 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
SNF8-203ENST00000504000 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
SNF8-203ENST00000504000 INE1O15225 51 aa5.73□□□□□ -1.49
SNF8-203ENST00000504000 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
SNF8-203ENST00000504000 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
SNF8-203ENST00000504000 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
SNF8-203ENST00000504000 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
SNF8-203ENST00000504000 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
SNF8-203ENST00000504000 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
SNF8-203ENST00000504000 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
SNF8-203ENST00000504000 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
SNF8-203ENST00000504000 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
SNF8-203ENST00000504000 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
SNF8-203ENST00000504000 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
SNF8-203ENST00000504000 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
SNF8-203ENST00000504000 USH2AO75445 5202 aa5.23□□□□□ -1.57
SNF8-203ENST00000504000 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
SNF8-203ENST00000504000 KMT2DO14686 5537 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms