RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
PDLIM7-210ENST00000503827 H0YAA0 97 aa6.39□□□□□ -1.39
PDLIM7-210ENST00000503827 Q8N9L7 120 aa6.39□□□□□ -1.39
PDLIM7-210ENST00000503827 A0A087WVE0 104 aa6.36□□□□□ -1.39
PDLIM7-210ENST00000503827 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
PDLIM7-210ENST00000503827 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
PDLIM7-210ENST00000503827 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
PDLIM7-210ENST00000503827 NDUFC1O43677 76 aa6.28□□□□□ -1.4
PDLIM7-210ENST00000503827 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
PDLIM7-210ENST00000503827 NAA38Q9BRA0 125 aaKnown RBP6.24□□□□□ -1.41
PDLIM7-210ENST00000503827 TMA7Q9Y2S6 64 aaKnown RBP6.24□□□□□ -1.41
PDLIM7-210ENST00000503827 UQCR10Q9UDW1 63 aa6.23□□□□□ -1.41
PDLIM7-210ENST00000503827 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
PDLIM7-210ENST00000503827 R4GN34 69 aa6.22□□□□□ -1.41
PDLIM7-210ENST00000503827 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
PDLIM7-210ENST00000503827 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
PDLIM7-210ENST00000503827 M0QZ58 72 aa6.13□□□□□ -1.43
PDLIM7-210ENST00000503827 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
PDLIM7-210ENST00000503827 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
PDLIM7-210ENST00000503827 K7EP34 96 aa6.11□□□□□ -1.43
PDLIM7-210ENST00000503827 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
PDLIM7-210ENST00000503827 H3BT86 120 aa6.09□□□□□ -1.43
PDLIM7-210ENST00000503827 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
PDLIM7-210ENST00000503827 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
PDLIM7-210ENST00000503827 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
PDLIM7-210ENST00000503827 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
PDLIM7-210ENST00000503827 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
PDLIM7-210ENST00000503827 MT4P47944 62 aa6.06□□□□□ -1.44
PDLIM7-210ENST00000503827 ACYP1P07311 99 aa6.05□□□□□ -1.44
PDLIM7-210ENST00000503827 P0C880 135 aa6.05□□□□□ -1.44
PDLIM7-210ENST00000503827 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
PDLIM7-210ENST00000503827 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
PDLIM7-210ENST00000503827 M0R143 59 aa6.04□□□□□ -1.44
PDLIM7-210ENST00000503827 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
PDLIM7-210ENST00000503827 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
PDLIM7-210ENST00000503827 SMIM6P0DI80 62 aa6.02□□□□□ -1.45
PDLIM7-210ENST00000503827 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
PDLIM7-210ENST00000503827 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
PDLIM7-210ENST00000503827 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
PDLIM7-210ENST00000503827 PCP4L1A6NKN8 68 aa5.93□□□□□ -1.46
PDLIM7-210ENST00000503827 KRTAP19-7Q3SYF9 63 aa5.92□□□□□ -1.46
PDLIM7-210ENST00000503827 BATFQ16520 125 aa5.91□□□□□ -1.46
PDLIM7-210ENST00000503827 MT1EP04732 61 aa5.9□□□□□ -1.46
PDLIM7-210ENST00000503827 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
PDLIM7-210ENST00000503827 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
PDLIM7-210ENST00000503827 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
PDLIM7-210ENST00000503827 ATOX1O00244 68 aa5.83□□□□□ -1.48
PDLIM7-210ENST00000503827 H0Y9P7 68 aa5.82□□□□□ -1.48
PDLIM7-210ENST00000503827 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
PDLIM7-210ENST00000503827 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
PDLIM7-210ENST00000503827 MT1GP13640 62 aa5.8□□□□□ -1.48
PDLIM7-210ENST00000503827 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PDLIM7-210ENST00000503827 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
PDLIM7-210ENST00000503827 UQCRQO14949 82 aa5.78□□□□□ -1.48
PDLIM7-210ENST00000503827 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
PDLIM7-210ENST00000503827 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
PDLIM7-210ENST00000503827 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
PDLIM7-210ENST00000503827 TAX1BP3O14907 124 aa5.73□□□□□ -1.49
PDLIM7-210ENST00000503827 MT1MQ8N339 61 aa5.67□□□□□ -1.5
PDLIM7-210ENST00000503827 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
PDLIM7-210ENST00000503827 A0A1B0GV90 55 aa5.66□□□□□ -1.5
PDLIM7-210ENST00000503827 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
PDLIM7-210ENST00000503827 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PDLIM7-210ENST00000503827 PRO0461Q9UI25 63 aa5.6□□□□□ -1.51
PDLIM7-210ENST00000503827 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
PDLIM7-210ENST00000503827 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
PDLIM7-210ENST00000503827 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
PDLIM7-210ENST00000503827 HIST1H4AP62805 103 aaKnown RBP5.55□□□□□ -1.52
PDLIM7-210ENST00000503827 MP68P56378 58 aa5.54□□□□□ -1.52
PDLIM7-210ENST00000503827 A0A0D9SG42 100 aa5.53□□□□□ -1.52
PDLIM7-210ENST00000503827 MT1LQ93083 61 aa5.53□□□□□ -1.52
PDLIM7-210ENST00000503827 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
PDLIM7-210ENST00000503827 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
PDLIM7-210ENST00000503827 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
PDLIM7-210ENST00000503827 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
PDLIM7-210ENST00000503827 PCP4P48539 62 aa5.42□□□□□ -1.54
PDLIM7-210ENST00000503827 ETDBQ3ZM63 59 aa5.4□□□□□ -1.54
PDLIM7-210ENST00000503827 K7ERU9 68 aa5.39□□□□□ -1.55
PDLIM7-210ENST00000503827 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
PDLIM7-210ENST00000503827 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
PDLIM7-210ENST00000503827 GTF2H5Q6ZYL4 71 aa5.38□□□□□ -1.55
PDLIM7-210ENST00000503827 H3BPC8 53 aa5.36□□□□□ -1.55
PDLIM7-210ENST00000503827 ACYP2P14621 99 aa5.35□□□□□ -1.55
PDLIM7-210ENST00000503827 F8W1H4 67 aa5.34□□□□□ -1.55
PDLIM7-210ENST00000503827 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
PDLIM7-210ENST00000503827 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
PDLIM7-210ENST00000503827 J3QR89 54 aa5.28□□□□□ -1.56
PDLIM7-210ENST00000503827 FAM240AA0A1B0GVK7 77 aa5.25□□□□□ -1.57
PDLIM7-210ENST00000503827 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
PDLIM7-210ENST00000503827 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
PDLIM7-210ENST00000503827 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
PDLIM7-210ENST00000503827 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
PDLIM7-210ENST00000503827 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
PDLIM7-210ENST00000503827 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
PDLIM7-210ENST00000503827 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
PDLIM7-210ENST00000503827 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
PDLIM7-210ENST00000503827 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
PDLIM7-210ENST00000503827 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
PDLIM7-210ENST00000503827 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
PDLIM7-210ENST00000503827 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms