RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
SPCS3-201ENST00000503362 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
SPCS3-201ENST00000503362 LRP1BQ9NZR2 4599 aa6.47□□□□□ -1.37
SPCS3-201ENST00000503362 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
SPCS3-201ENST00000503362 DNAH2Q9P225 4427 aa6.46□□□□□ -1.38
SPCS3-201ENST00000503362 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
SPCS3-201ENST00000503362 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
SPCS3-201ENST00000503362 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
SPCS3-201ENST00000503362 TNP1P09430 55 aa6.41□□□□□ -1.38
SPCS3-201ENST00000503362 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
SPCS3-201ENST00000503362 FAT1Q14517 4588 aa6.4□□□□□ -1.39
SPCS3-201ENST00000503362 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
SPCS3-201ENST00000503362 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
SPCS3-201ENST00000503362 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
SPCS3-201ENST00000503362 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
SPCS3-201ENST00000503362 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
SPCS3-201ENST00000503362 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
SPCS3-201ENST00000503362 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
SPCS3-201ENST00000503362 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
SPCS3-201ENST00000503362 DNAH6Q9C0G6 4158 aa6.26□□□□□ -1.41
SPCS3-201ENST00000503362 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
SPCS3-201ENST00000503362 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
SPCS3-201ENST00000503362 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
SPCS3-201ENST00000503362 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
SPCS3-201ENST00000503362 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
SPCS3-201ENST00000503362 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
SPCS3-201ENST00000503362 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
SPCS3-201ENST00000503362 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
SPCS3-201ENST00000503362 RYR1P21817 5038 aa6.02□□□□□ -1.45
SPCS3-201ENST00000503362 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
SPCS3-201ENST00000503362 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
SPCS3-201ENST00000503362 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
SPCS3-201ENST00000503362 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
SPCS3-201ENST00000503362 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
SPCS3-201ENST00000503362 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
SPCS3-201ENST00000503362 RYR3Q15413 4870 aa5.86□□□□□ -1.47
SPCS3-201ENST00000503362 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
SPCS3-201ENST00000503362 PKD1P98161 4303 aa5.82□□□□□ -1.48
SPCS3-201ENST00000503362 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
SPCS3-201ENST00000503362 RYR2Q92736 4967 aa5.78□□□□□ -1.48
SPCS3-201ENST00000503362 LRP2P98164 4655 aa5.75□□□□□ -1.49
SPCS3-201ENST00000503362 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
SPCS3-201ENST00000503362 HSPG2P98160 4391 aa5.63□□□□□ -1.51
SPCS3-201ENST00000503362 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
SPCS3-201ENST00000503362 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
SPCS3-201ENST00000503362 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
SPCS3-201ENST00000503362 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
SPCS3-201ENST00000503362 LPAP08519 4548 aa5.51□□□□□ -1.53
SPCS3-201ENST00000503362 HERC2O95714 4834 aa5.48□□□□□ -1.53
SPCS3-201ENST00000503362 TNXBP22105 4242 aa5.48□□□□□ -1.53
SPCS3-201ENST00000503362 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
SPCS3-201ENST00000503362 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
SPCS3-201ENST00000503362 MT1HP80294 61 aa5.43□□□□□ -1.54
SPCS3-201ENST00000503362 MT2AP02795 61 aa5.39□□□□□ -1.55
SPCS3-201ENST00000503362 MT1FP04733 61 aa5.35□□□□□ -1.55
SPCS3-201ENST00000503362 EPPK1P58107 5090 aaKnown RBP5.31□□□□□ -1.56
SPCS3-201ENST00000503362 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
SPCS3-201ENST00000503362 INE1O15225 51 aa5.25□□□□□ -1.57
SPCS3-201ENST00000503362 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
SPCS3-201ENST00000503362 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
SPCS3-201ENST00000503362 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
SPCS3-201ENST00000503362 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
SPCS3-201ENST00000503362 MUC17Q685J3 4493 aa5.16□□□□□ -1.58
SPCS3-201ENST00000503362 HERC1Q15751 4861 aa5.14□□□□□ -1.59
SPCS3-201ENST00000503362 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
SPCS3-201ENST00000503362 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
SPCS3-201ENST00000503362 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
SPCS3-201ENST00000503362 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
SPCS3-201ENST00000503362 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
SPCS3-201ENST00000503362 MUC2Q02817 5179 aa5.07□□□□□ -1.6
SPCS3-201ENST00000503362 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
SPCS3-201ENST00000503362 MT1XP80297 61 aa5.04□□□□□ -1.6
SPCS3-201ENST00000503362 MT1BP07438 61 aa5.04□□□□□ -1.6
SPCS3-201ENST00000503362 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
SPCS3-201ENST00000503362 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
SPCS3-201ENST00000503362 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SPCS3-201ENST00000503362 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
SPCS3-201ENST00000503362 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SPCS3-201ENST00000503362 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
SPCS3-201ENST00000503362 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
SPCS3-201ENST00000503362 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
SPCS3-201ENST00000503362 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
SPCS3-201ENST00000503362 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
SPCS3-201ENST00000503362 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
SPCS3-201ENST00000503362 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SPCS3-201ENST00000503362 LCE2BO14633 110 aa4.71□□□□□ -1.66
SPCS3-201ENST00000503362 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
SPCS3-201ENST00000503362 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
SPCS3-201ENST00000503362 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
SPCS3-201ENST00000503362 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
SPCS3-201ENST00000503362 MT1GP13640 62 aa4.49□□□□□ -1.69
SPCS3-201ENST00000503362 MT1LQ93083 61 aa4.46□□□□□ -1.7
SPCS3-201ENST00000503362 MT1EP04732 61 aa4.43□□□□□ -1.7
SPCS3-201ENST00000503362 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
SPCS3-201ENST00000503362 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
SPCS3-201ENST00000503362 USH2AO75445 5202 aa4.35□□□□□ -1.71
SPCS3-201ENST00000503362 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
SPCS3-201ENST00000503362 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
SPCS3-201ENST00000503362 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
SPCS3-201ENST00000503362 KMT2DO14686 5537 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms