RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 LINC00208Q96KT6 92 aa11.74□□□□□ -0.53
CCDC149-203ENST00000502801 OCR1Q9BZK8 76 aa11.73□□□□□ -0.53
CCDC149-203ENST00000502801 J3QR89 54 aa11.7□□□□□ -0.54
CCDC149-203ENST00000502801 MT1BP07438 61 aa11.69□□□□□ -0.54
CCDC149-203ENST00000502801 MP68P56378 58 aa11.67□□□□□ -0.54
CCDC149-203ENST00000502801 KRTAP19-8Q3LI54 63 aa11.67□□□□□ -0.54
CCDC149-203ENST00000502801 Q5VV11 94 aa11.67□□□□□ -0.54
CCDC149-203ENST00000502801 NDUFC1O43677 76 aa11.66□□□□□ -0.54
CCDC149-203ENST00000502801 A8MUN3 132 aa11.64□□□□□ -0.55
CCDC149-203ENST00000502801 SYNE2Q8WXH0 6885 aaKnown RBP11.62□□□□□ -0.55
CCDC149-203ENST00000502801 IMUPQ9GZP8 106 aa11.62□□□□□ -0.55
CCDC149-203ENST00000502801 CRIPTQ9P021 101 aa11.56□□□□□ -0.56
CCDC149-203ENST00000502801 H0YAA0 97 aa11.53□□□□□ -0.56
CCDC149-203ENST00000502801 A6NN06 94 aa11.52□□□□□ -0.57
CCDC149-203ENST00000502801 H3BPC8 53 aa11.5□□□□□ -0.57
CCDC149-203ENST00000502801 SCGB1A1P11684 91 aa11.5□□□□□ -0.57
CCDC149-203ENST00000502801 ADM2Q7Z4H4 148 aa11.43□□□□□ -0.58
CCDC149-203ENST00000502801 KRTAP10-5P60370 271 aa11.4□□□□□ -0.58
CCDC149-203ENST00000502801 KRTAP6-3Q3LI67 103 aa11.4□□□□□ -0.58
CCDC149-203ENST00000502801 DMAC1Q96GE9 116 aa11.35□□□□□ -0.59
CCDC149-203ENST00000502801 MT-ATP8P03928 68 aa11.31□□□□□ -0.6
CCDC149-203ENST00000502801 K7ERU9 68 aa11.27□□□□□ -0.61
CCDC149-203ENST00000502801 TRAV7A0A075B6U4 112 aa11.2□□□□□ -0.62
CCDC149-203ENST00000502801 P0C880 135 aa11.19□□□□□ -0.62
CCDC149-203ENST00000502801 SMIM20Q8N5G0 67 aa11.18□□□□□ -0.62
CCDC149-203ENST00000502801 C20orf197Q8N268 126 aa11.14□□□□□ -0.63
CCDC149-203ENST00000502801 R4GN34 69 aa11.13□□□□□ -0.63
CCDC149-203ENST00000502801 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
CCDC149-203ENST00000502801 ACYP2P14621 99 aa11.09□□□□□ -0.63
CCDC149-203ENST00000502801 M0QZ58 72 aa11.04□□□□□ -0.64
CCDC149-203ENST00000502801 PLAC4Q8WY50 150 aa11.04□□□□□ -0.64
CCDC149-203ENST00000502801 PRO2289Q9P1D8 64 aa10.98□□□□□ -0.65
CCDC149-203ENST00000502801 SNURFQ9Y675 71 aa10.98□□□□□ -0.65
CCDC149-203ENST00000502801 MT1XP80297 61 aa10.97□□□□□ -0.65
CCDC149-203ENST00000502801 SPTSSBQ8NFR3 76 aa10.93□□□□□ -0.66
CCDC149-203ENST00000502801 KRTAP5-9P26371 169 aa10.9□□□□□ -0.66
CCDC149-203ENST00000502801 NEBP20929 6669 aa10.89□□□□□ -0.67
CCDC149-203ENST00000502801 LINC01554Q52M75 96 aa10.89□□□□□ -0.67
CCDC149-203ENST00000502801 MUC12Q9UKN1 5478 aa10.88□□□□□ -0.67
CCDC149-203ENST00000502801 CHKB-CPT1BH3BT56 60 aa10.88□□□□□ -0.67
CCDC149-203ENST00000502801 SERP2Q8N6R1 65 aa10.82□□□□□ -0.68
CCDC149-203ENST00000502801 SPANXA2-OT1Q8N9U9 137 aa10.8□□□□□ -0.68
CCDC149-203ENST00000502801 KMT2DO14686 5537 aa10.74□□□□□ -0.69
CCDC149-203ENST00000502801 KRTAP12-2P59991 146 aa10.68□□□□□ -0.7
CCDC149-203ENST00000502801 SPRR2FQ96RM1 72 aa10.61□□□□□ -0.71
CCDC149-203ENST00000502801 MDN1Q9NU22 5596 aa10.61□□□□□ -0.71
CCDC149-203ENST00000502801 KRTAP8-1Q8IUC2 63 aa10.59□□□□□ -0.71
CCDC149-203ENST00000502801 KRTAP20-1Q3LI63 56 aa10.53□□□□□ -0.72
CCDC149-203ENST00000502801 COA5Q86WW8 74 aa10.51□□□□□ -0.73
CCDC149-203ENST00000502801 KRTAP4-8A0A0G2JLE6 195 aa10.5□□□□□ -0.73
CCDC149-203ENST00000502801 COX7CP15954 63 aa10.5□□□□□ -0.73
CCDC149-203ENST00000502801 KRTAP4-8Q9BYQ9 185 aa10.5□□□□□ -0.73
CCDC149-203ENST00000502801 KRTAP10-7P60409 375 aaPredicted RBP10.48□□□□□ -0.73
CCDC149-203ENST00000502801 KRTAP13-4Q3LI77 160 aa10.47□□□□□ -0.73
CCDC149-203ENST00000502801 SPRR2EP22531 72 aa10.44□□□□□ -0.74
CCDC149-203ENST00000502801 SPRR2BP35325 72 aa10.44□□□□□ -0.74
CCDC149-203ENST00000502801 SPRR2AP35326 72 aa10.44□□□□□ -0.74
CCDC149-203ENST00000502801 KRTAP10-12P60413 245 aa10.41□□□□□ -0.74
CCDC149-203ENST00000502801 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
CCDC149-203ENST00000502801 H7BZZ5 65 aa10.34□□□□□ -0.75
CCDC149-203ENST00000502801 LCE1AQ5T7P2 110 aa10.32□□□□□ -0.76
CCDC149-203ENST00000502801 SEC61GP60059 68 aa10.3□□□□□ -0.76
CCDC149-203ENST00000502801 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
CCDC149-203ENST00000502801 KRTAP2-3P0C7H8 128 aa10.27□□□□□ -0.77
CCDC149-203ENST00000502801 KRTAP2-4Q9BYR9 128 aa10.27□□□□□ -0.77
CCDC149-203ENST00000502801 CAMK2N1Q7Z7J9 78 aa10.24□□□□□ -0.77
CCDC149-203ENST00000502801 A0A0D9SG42 100 aa10.16□□□□□ -0.78
CCDC149-203ENST00000502801 SPATA8Q6RVD6 105 aa10.15□□□□□ -0.78
CCDC149-203ENST00000502801 A0A1B0GU33 70 aa10.14□□□□□ -0.79
CCDC149-203ENST00000502801 ANAPC13Q9BS18 74 aa10.14□□□□□ -0.79
CCDC149-203ENST00000502801 SPRR2DP22532 72 aa10.08□□□□□ -0.8
CCDC149-203ENST00000502801 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
CCDC149-203ENST00000502801 A0A1B0GU69 56 aa9.97□□□□□ -0.81
CCDC149-203ENST00000502801 CCDC179H3BU77 68 aa9.96□□□□□ -0.82
CCDC149-203ENST00000502801 KRTAP2-2Q9BYT5 123 aa9.96□□□□□ -0.82
CCDC149-203ENST00000502801 KRTAP2-1Q9BYU5 128 aa9.96□□□□□ -0.82
CCDC149-203ENST00000502801 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
CCDC149-203ENST00000502801 SMIM26A0A096LP01 95 aa9.84□□□□□ -0.83
CCDC149-203ENST00000502801 KRTAP19-7Q3SYF9 63 aa9.81□□□□□ -0.84
CCDC149-203ENST00000502801 LCE3BQ5TA77 95 aa9.81□□□□□ -0.84
CCDC149-203ENST00000502801 A8MU10 97 aa9.79□□□□□ -0.84
CCDC149-203ENST00000502801 ATP5EP56381 51 aaPredicted RBP9.79□□□□□ -0.84
CCDC149-203ENST00000502801 MT1EP04732 61 aa9.72□□□□□ -0.85
CCDC149-203ENST00000502801 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
CCDC149-203ENST00000502801 LCE5AQ5TCM9 118 aa9.64□□□□□ -0.87
CCDC149-203ENST00000502801 KRTAP19-3Q7Z4W3 81 aa9.62□□□□□ -0.87
CCDC149-203ENST00000502801 LINC01558Q9Y6Z2 57 aa9.61□□□□□ -0.87
CCDC149-203ENST00000502801 KRTAP19-5Q3LI72 72 aa9.58□□□□□ -0.88
CCDC149-203ENST00000502801 TMEM258P61165 79 aa9.56□□□□□ -0.88
CCDC149-203ENST00000502801 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.89
CCDC149-203ENST00000502801 TNP1P09430 55 aa9.46□□□□□ -0.9
CCDC149-203ENST00000502801 DSTQ03001 7570 aaKnown RBP9.45□□□□□ -0.9
CCDC149-203ENST00000502801 MT1GP13640 62 aa9.4□□□□□ -0.9
CCDC149-203ENST00000502801 LCE3AQ5TA76 89 aa9.4□□□□□ -0.9
CCDC149-203ENST00000502801 UQCR11O14957 56 aa9.36□□□□□ -0.91
CCDC149-203ENST00000502801 PP632Q6XCG6 107 aa9.31□□□□□ -0.92
CCDC149-203ENST00000502801 MT1LQ93083 61 aa9.3□□□□□ -0.92
CCDC149-203ENST00000502801 MT1MQ8N339 61 aa9.25□□□□□ -0.93
CCDC149-203ENST00000502801 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
CCDC149-203ENST00000502801 KRTAP4-9Q9BYQ8 210 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms