RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
NEAT1-202ENST00000501122 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
NEAT1-202ENST00000501122 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
NEAT1-202ENST00000501122 AKAP9Q99996 3911 aa2.05□□□□□ -2.08
NEAT1-202ENST00000501122 PLECQ15149 4684 aaKnown RBP2.03□□□□□ -2.08
NEAT1-202ENST00000501122 KRTAP10-5P60370 271 aa2.03□□□□□ -2.09
NEAT1-202ENST00000501122 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
NEAT1-202ENST00000501122 DNHD1Q96M86 4753 aa1.99□□□□□ -2.09
NEAT1-202ENST00000501122 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
NEAT1-202ENST00000501122 KRTAP17-1Q9BYP8 105 aa1.98□□□□□ -2.09
NEAT1-202ENST00000501122 KRTAP10-12P60413 245 aa1.98□□□□□ -2.09
NEAT1-202ENST00000501122 DNAH8Q96JB1 4490 aa1.98□□□□□ -2.09
NEAT1-202ENST00000501122 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
NEAT1-202ENST00000501122 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
NEAT1-202ENST00000501122 SYNE2Q8WXH0 6885 aaKnown RBP1.96□□□□□ -2.1
NEAT1-202ENST00000501122 LORP23490 312 aaPredicted RBP1.96□□□□□ -2.1
NEAT1-202ENST00000501122 DNAH17Q9UFH2 4485 aa1.94□□□□□ -2.1
NEAT1-202ENST00000501122 VPS13BQ7Z7G8 4022 aa1.94□□□□□ -2.1
NEAT1-202ENST00000501122 FRAS1Q86XX4 4008 aa1.91□□□□□ -2.1
NEAT1-202ENST00000501122 DNAH6Q9C0G6 4158 aa1.89□□□□□ -2.11
NEAT1-202ENST00000501122 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
NEAT1-202ENST00000501122 DNAH3Q8TD57 4116 aa1.88□□□□□ -2.11
NEAT1-202ENST00000501122 KRTAP4-5Q9BYR2 181 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 FAT1Q14517 4588 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 PKD1P98161 4303 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
NEAT1-202ENST00000501122 CMYA5Q8N3K9 4069 aa1.86□□□□□ -2.11
NEAT1-202ENST00000501122 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
NEAT1-202ENST00000501122 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
NEAT1-202ENST00000501122 ANK2Q01484 3957 aa1.85□□□□□ -2.11
NEAT1-202ENST00000501122 DYNC2H1Q8NCM8 4307 aaKnown RBP1.84□□□□□ -2.11
NEAT1-202ENST00000501122 KMT2AQ03164 3969 aa1.84□□□□□ -2.11
NEAT1-202ENST00000501122 FAT2Q9NYQ8 4349 aa1.84□□□□□ -2.12
NEAT1-202ENST00000501122 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
NEAT1-202ENST00000501122 PRKDCP78527 4128 aaKnown RBP1.83□□□□□ -2.12
NEAT1-202ENST00000501122 HECTD4Q9Y4D8 3996 aa1.83□□□□□ -2.12
NEAT1-202ENST00000501122 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
NEAT1-202ENST00000501122 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
NEAT1-202ENST00000501122 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
NEAT1-202ENST00000501122 HSPG2P98160 4391 aa1.81□□□□□ -2.12
NEAT1-202ENST00000501122 SACSQ9NZJ4 4579 aa1.79□□□□□ -2.12
NEAT1-202ENST00000501122 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
NEAT1-202ENST00000501122 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
NEAT1-202ENST00000501122 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
NEAT1-202ENST00000501122 DYNC1H1Q14204 4646 aaKnown RBP1.78□□□□□ -2.12
NEAT1-202ENST00000501122 TNXBP22105 4242 aa1.77□□□□□ -2.13
NEAT1-202ENST00000501122 KRTAP8-1Q8IUC2 63 aa1.76□□□□□ -2.13
NEAT1-202ENST00000501122 LYSTQ99698 3801 aa1.76□□□□□ -2.13
NEAT1-202ENST00000501122 LRP2P98164 4655 aa1.75□□□□□ -2.13
NEAT1-202ENST00000501122 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
NEAT1-202ENST00000501122 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
NEAT1-202ENST00000501122 HERC1Q15751 4861 aa1.73□□□□□ -2.13
NEAT1-202ENST00000501122 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
NEAT1-202ENST00000501122 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
NEAT1-202ENST00000501122 RYR3Q15413 4870 aa1.71□□□□□ -2.14
NEAT1-202ENST00000501122 HERC2O95714 4834 aa1.71□□□□□ -2.14
NEAT1-202ENST00000501122 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
NEAT1-202ENST00000501122 KRTAP10-7P60409 375 aaPredicted RBP1.69□□□□□ -2.14
NEAT1-202ENST00000501122 BIRC6Q9NR09 4857 aa1.69□□□□□ -2.14
NEAT1-202ENST00000501122 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
NEAT1-202ENST00000501122 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
NEAT1-202ENST00000501122 RYR1P21817 5038 aa1.66□□□□□ -2.14
NEAT1-202ENST00000501122 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.14
NEAT1-202ENST00000501122 KRTAP4-7Q9BYR0 210 aa1.65□□□□□ -2.15
NEAT1-202ENST00000501122 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
NEAT1-202ENST00000501122 LCE3BQ5TA77 95 aa1.64□□□□□ -2.15
NEAT1-202ENST00000501122 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
NEAT1-202ENST00000501122 NEBP20929 6669 aa1.63□□□□□ -2.15
NEAT1-202ENST00000501122 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
NEAT1-202ENST00000501122 PRM1P04553 51 aa1.61□□□□□ -2.15
NEAT1-202ENST00000501122 RYR2Q92736 4967 aa1.6□□□□□ -2.15
NEAT1-202ENST00000501122 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
NEAT1-202ENST00000501122 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
NEAT1-202ENST00000501122 MDN1Q9NU22 5596 aa1.59□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP19-1Q8IUB9 90 aa1.57□□□□□ -2.16
NEAT1-202ENST00000501122 KMT2CQ8NEZ4 4911 aaKnown RBP1.57□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP4-8A0A0G2JLE6 195 aa1.56□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP4-8Q9BYQ9 185 aa1.56□□□□□ -2.16
NEAT1-202ENST00000501122 LCE2CQ5TA81 110 aa1.56□□□□□ -2.16
NEAT1-202ENST00000501122 MT1GP13640 62 aa1.55□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
NEAT1-202ENST00000501122 MT1XP80297 61 aa1.55□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
NEAT1-202ENST00000501122 LOC100996750A0A140TA64 210 aa1.54□□□□□ -2.16
NEAT1-202ENST00000501122 HYDINQ4G0P3 5121 aa1.53□□□□□ -2.16
NEAT1-202ENST00000501122 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
NEAT1-202ENST00000501122 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.17
NEAT1-202ENST00000501122 MT1HP80294 61 aa1.52□□□□□ -2.17
NEAT1-202ENST00000501122 MUC17Q685J3 4493 aa1.51□□□□□ -2.17
NEAT1-202ENST00000501122 MT2AP02795 61 aa1.51□□□□□ -2.17
NEAT1-202ENST00000501122 KIAA1109Q2LD37 5005 aa1.5□□□□□ -2.17
NEAT1-202ENST00000501122 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
NEAT1-202ENST00000501122 MT1FP04733 61 aa1.48□□□□□ -2.17
NEAT1-202ENST00000501122 SPRR2FQ96RM1 72 aa1.48□□□□□ -2.17
NEAT1-202ENST00000501122 ABCA13Q86UQ4 5058 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms