RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 K7ERS5 55 aa8.6□□□□□ -1.03
ZCCHC3-201ENST00000500893 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
ZCCHC3-201ENST00000500893 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
ZCCHC3-201ENST00000500893 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
ZCCHC3-201ENST00000500893 XP32Q5T750 250 aa8.55□□□□□ -1.04
ZCCHC3-201ENST00000500893 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
ZCCHC3-201ENST00000500893 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
ZCCHC3-201ENST00000500893 HSPG2P98160 4391 aa8.51□□□□□ -1.05
ZCCHC3-201ENST00000500893 S4R3F8 94 aa8.5□□□□□ -1.05
ZCCHC3-201ENST00000500893 RYR3Q15413 4870 aa8.5□□□□□ -1.05
ZCCHC3-201ENST00000500893 KRTAP17-1Q9BYP8 105 aa8.47□□□□□ -1.05
ZCCHC3-201ENST00000500893 P0C880 135 aa8.41□□□□□ -1.06
ZCCHC3-201ENST00000500893 RYR1P21817 5038 aa8.41□□□□□ -1.06
ZCCHC3-201ENST00000500893 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
ZCCHC3-201ENST00000500893 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
ZCCHC3-201ENST00000500893 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
ZCCHC3-201ENST00000500893 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
ZCCHC3-201ENST00000500893 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
ZCCHC3-201ENST00000500893 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
ZCCHC3-201ENST00000500893 TNXBP22105 4242 aa8.34□□□□□ -1.07
ZCCHC3-201ENST00000500893 LRP2P98164 4655 aa8.31□□□□□ -1.08
ZCCHC3-201ENST00000500893 ROMO1P60602 79 aa8.3□□□□□ -1.08
ZCCHC3-201ENST00000500893 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
ZCCHC3-201ENST00000500893 LPAP08519 4548 aa8.29□□□□□ -1.08
ZCCHC3-201ENST00000500893 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
ZCCHC3-201ENST00000500893 EPPK1P58107 5090 aaKnown RBP8.24□□□□□ -1.09
ZCCHC3-201ENST00000500893 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
ZCCHC3-201ENST00000500893 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
ZCCHC3-201ENST00000500893 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
ZCCHC3-201ENST00000500893 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
ZCCHC3-201ENST00000500893 J3QL48 77 aa8.16□□□□□ -1.1
ZCCHC3-201ENST00000500893 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
ZCCHC3-201ENST00000500893 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
ZCCHC3-201ENST00000500893 M0QZ58 72 aa8.07□□□□□ -1.12
ZCCHC3-201ENST00000500893 R4GN34 69 aa8.03□□□□□ -1.12
ZCCHC3-201ENST00000500893 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
ZCCHC3-201ENST00000500893 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
ZCCHC3-201ENST00000500893 MUC2Q02817 5179 aa7.89□□□□□ -1.15
ZCCHC3-201ENST00000500893 HERC2O95714 4834 aa7.86□□□□□ -1.15
ZCCHC3-201ENST00000500893 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
ZCCHC3-201ENST00000500893 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
ZCCHC3-201ENST00000500893 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
ZCCHC3-201ENST00000500893 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
ZCCHC3-201ENST00000500893 HERC1Q15751 4861 aa7.62□□□□□ -1.19
ZCCHC3-201ENST00000500893 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
ZCCHC3-201ENST00000500893 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
ZCCHC3-201ENST00000500893 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
ZCCHC3-201ENST00000500893 M0R2T5 61 aa7.49□□□□□ -1.21
ZCCHC3-201ENST00000500893 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
ZCCHC3-201ENST00000500893 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
ZCCHC3-201ENST00000500893 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.22
ZCCHC3-201ENST00000500893 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
ZCCHC3-201ENST00000500893 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
ZCCHC3-201ENST00000500893 FLGP20930 4061 aaPredicted RBP7.24□□□□□ -1.25
ZCCHC3-201ENST00000500893 UBR4Q5T4S7 5183 aa7.24□□□□□ -1.25
ZCCHC3-201ENST00000500893 TNP1P09430 55 aa7.23□□□□□ -1.25
ZCCHC3-201ENST00000500893 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
ZCCHC3-201ENST00000500893 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
ZCCHC3-201ENST00000500893 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
ZCCHC3-201ENST00000500893 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
ZCCHC3-201ENST00000500893 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
ZCCHC3-201ENST00000500893 MT1HP80294 61 aa6.97□□□□□ -1.29
ZCCHC3-201ENST00000500893 MT1FP04733 61 aa6.92□□□□□ -1.3
ZCCHC3-201ENST00000500893 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.31
ZCCHC3-201ENST00000500893 MT2AP02795 61 aa6.88□□□□□ -1.31
ZCCHC3-201ENST00000500893 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
ZCCHC3-201ENST00000500893 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
ZCCHC3-201ENST00000500893 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
ZCCHC3-201ENST00000500893 USH2AO75445 5202 aa6.66□□□□□ -1.34
ZCCHC3-201ENST00000500893 MT1BP07438 61 aa6.6□□□□□ -1.35
ZCCHC3-201ENST00000500893 KRTAP10-5P60370 271 aa6.57□□□□□ -1.36
ZCCHC3-201ENST00000500893 MT1XP80297 61 aa6.57□□□□□ -1.36
ZCCHC3-201ENST00000500893 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
ZCCHC3-201ENST00000500893 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
ZCCHC3-201ENST00000500893 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
ZCCHC3-201ENST00000500893 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
ZCCHC3-201ENST00000500893 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
ZCCHC3-201ENST00000500893 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
ZCCHC3-201ENST00000500893 KMT2DO14686 5537 aa6.46□□□□□ -1.37
ZCCHC3-201ENST00000500893 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
ZCCHC3-201ENST00000500893 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
ZCCHC3-201ENST00000500893 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
ZCCHC3-201ENST00000500893 LCE2BO14633 110 aa6.29□□□□□ -1.4
ZCCHC3-201ENST00000500893 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
ZCCHC3-201ENST00000500893 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
ZCCHC3-201ENST00000500893 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
ZCCHC3-201ENST00000500893 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
ZCCHC3-201ENST00000500893 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
ZCCHC3-201ENST00000500893 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
ZCCHC3-201ENST00000500893 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
ZCCHC3-201ENST00000500893 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
ZCCHC3-201ENST00000500893 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
ZCCHC3-201ENST00000500893 INE1O15225 51 aa5.83□□□□□ -1.48
ZCCHC3-201ENST00000500893 KRTAP19-7Q3SYF9 63 aa5.83□□□□□ -1.48
ZCCHC3-201ENST00000500893 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
ZCCHC3-201ENST00000500893 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
ZCCHC3-201ENST00000500893 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
ZCCHC3-201ENST00000500893 MT1LQ93083 61 aa5.68□□□□□ -1.5
ZCCHC3-201ENST00000500893 MT1EP04732 61 aa5.67□□□□□ -1.5
ZCCHC3-201ENST00000500893 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms