RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 Q8N9L7 120 aa6.43□□□□□ -1.38
HDAC6-236ENST00000498808 TSTD3H0UI37 97 aa6.41□□□□□ -1.38
HDAC6-236ENST00000498808 BPY2O14599 106 aa6.41□□□□□ -1.38
HDAC6-236ENST00000498808 A0A087WVE0 104 aa6.39□□□□□ -1.39
HDAC6-236ENST00000498808 UQCR10Q9UDW1 63 aa6.36□□□□□ -1.39
HDAC6-236ENST00000498808 A8MUN3 132 aa6.35□□□□□ -1.39
HDAC6-236ENST00000498808 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
HDAC6-236ENST00000498808 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
HDAC6-236ENST00000498808 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
HDAC6-236ENST00000498808 H0YAA0 97 aa6.31□□□□□ -1.4
HDAC6-236ENST00000498808 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
HDAC6-236ENST00000498808 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
HDAC6-236ENST00000498808 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-236ENST00000498808 M0R143 59 aa6.25□□□□□ -1.41
HDAC6-236ENST00000498808 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
HDAC6-236ENST00000498808 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
HDAC6-236ENST00000498808 NDUFC1O43677 76 aa6.18□□□□□ -1.42
HDAC6-236ENST00000498808 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
HDAC6-236ENST00000498808 COL5A1-AS1Q5SY13 56 aa6.16□□□□□ -1.42
HDAC6-236ENST00000498808 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
HDAC6-236ENST00000498808 BATFQ16520 125 aa6.15□□□□□ -1.42
HDAC6-236ENST00000498808 H3BT86 120 aa6.13□□□□□ -1.43
HDAC6-236ENST00000498808 K7EP34 96 aa6.12□□□□□ -1.43
HDAC6-236ENST00000498808 R4GN34 69 aa6.11□□□□□ -1.43
HDAC6-236ENST00000498808 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
HDAC6-236ENST00000498808 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
HDAC6-236ENST00000498808 M0QZ58 72 aa6.05□□□□□ -1.44
HDAC6-236ENST00000498808 P0C880 135 aa6.05□□□□□ -1.44
HDAC6-236ENST00000498808 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
HDAC6-236ENST00000498808 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
HDAC6-236ENST00000498808 TAX1BP3O14907 124 aa6.02□□□□□ -1.45
HDAC6-236ENST00000498808 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
HDAC6-236ENST00000498808 UBL5Q9BZL1 73 aa6.02□□□□□ -1.45
HDAC6-236ENST00000498808 LINC01554Q52M75 96 aa6□□□□□ -1.45
HDAC6-236ENST00000498808 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
HDAC6-236ENST00000498808 A0A1W2PPM0 123 aa5.99□□□□□ -1.45
HDAC6-236ENST00000498808 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
HDAC6-236ENST00000498808 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
HDAC6-236ENST00000498808 ACYP1P07311 99 aa5.95□□□□□ -1.46
HDAC6-236ENST00000498808 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
HDAC6-236ENST00000498808 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
HDAC6-236ENST00000498808 C20orf197Q8N268 126 aa5.94□□□□□ -1.46
HDAC6-236ENST00000498808 A0A1B0GV90 55 aa5.92□□□□□ -1.46
HDAC6-236ENST00000498808 MT4P47944 62 aa5.92□□□□□ -1.46
HDAC6-236ENST00000498808 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
HDAC6-236ENST00000498808 F8W1H4 67 aa5.89□□□□□ -1.47
HDAC6-236ENST00000498808 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
HDAC6-236ENST00000498808 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
HDAC6-236ENST00000498808 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
HDAC6-236ENST00000498808 MT1EP04732 61 aa5.86□□□□□ -1.47
HDAC6-236ENST00000498808 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
HDAC6-236ENST00000498808 H0Y9P7 68 aa5.81□□□□□ -1.48
HDAC6-236ENST00000498808 ATOX1O00244 68 aa5.78□□□□□ -1.48
HDAC6-236ENST00000498808 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
HDAC6-236ENST00000498808 PRO0461Q9UI25 63 aa5.78□□□□□ -1.48
HDAC6-236ENST00000498808 J3QR89 54 aa5.76□□□□□ -1.49
HDAC6-236ENST00000498808 UQCRQO14949 82 aa5.76□□□□□ -1.49
HDAC6-236ENST00000498808 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
HDAC6-236ENST00000498808 MT-ATP8P03928 68 aa5.72□□□□□ -1.49
HDAC6-236ENST00000498808 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
HDAC6-236ENST00000498808 K7ERU9 68 aa5.7□□□□□ -1.5
HDAC6-236ENST00000498808 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
HDAC6-236ENST00000498808 MT1GP13640 62 aa5.69□□□□□ -1.5
HDAC6-236ENST00000498808 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
HDAC6-236ENST00000498808 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
HDAC6-236ENST00000498808 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
HDAC6-236ENST00000498808 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
HDAC6-236ENST00000498808 MT1MQ8N339 61 aa5.61□□□□□ -1.51
HDAC6-236ENST00000498808 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
HDAC6-236ENST00000498808 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
HDAC6-236ENST00000498808 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
HDAC6-236ENST00000498808 HIST1H4AP62805 103 aaKnown RBP5.54□□□□□ -1.52
HDAC6-236ENST00000498808 LINC00643Q86TS7 51 aa5.53□□□□□ -1.52
HDAC6-236ENST00000498808 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
HDAC6-236ENST00000498808 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
HDAC6-236ENST00000498808 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
HDAC6-236ENST00000498808 MP68P56378 58 aa5.5□□□□□ -1.53
HDAC6-236ENST00000498808 MT1LQ93083 61 aa5.49□□□□□ -1.53
HDAC6-236ENST00000498808 A0A0D9SG42 100 aa5.46□□□□□ -1.54
HDAC6-236ENST00000498808 OCR1Q9BZK8 76 aa5.45□□□□□ -1.54
HDAC6-236ENST00000498808 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
HDAC6-236ENST00000498808 TRAV7A0A075B6U4 112 aa5.42□□□□□ -1.54
HDAC6-236ENST00000498808 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
HDAC6-236ENST00000498808 H3BPC8 53 aa5.34□□□□□ -1.55
HDAC6-236ENST00000498808 SCGB1A1P11684 91 aa5.33□□□□□ -1.56
HDAC6-236ENST00000498808 SPTSSBQ8NFR3 76 aa5.32□□□□□ -1.56
HDAC6-236ENST00000498808 ACYP2P14621 99 aa5.3□□□□□ -1.56
HDAC6-236ENST00000498808 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
HDAC6-236ENST00000498808 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
HDAC6-236ENST00000498808 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
HDAC6-236ENST00000498808 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
HDAC6-236ENST00000498808 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
HDAC6-236ENST00000498808 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
HDAC6-236ENST00000498808 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
HDAC6-236ENST00000498808 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
HDAC6-236ENST00000498808 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
HDAC6-236ENST00000498808 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
HDAC6-236ENST00000498808 COX7CP15954 63 aa5.13□□□□□ -1.59
HDAC6-236ENST00000498808 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
HDAC6-236ENST00000498808 PCP4P48539 62 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms