RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
PAXBP1-209ENST00000497873 HECTD4Q9Y4D8 3996 aa3.21□□□□□ -1.89
PAXBP1-209ENST00000497873 CASC2Q6XLA1 102 aa3.21□□□□□ -1.9
PAXBP1-209ENST00000497873 SPINK7P58062 85 aa3.21□□□□□ -1.9
PAXBP1-209ENST00000497873 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
PAXBP1-209ENST00000497873 A0A096LNI7 61 aa3.2□□□□□ -1.9
PAXBP1-209ENST00000497873 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
PAXBP1-209ENST00000497873 LINC00304Q8N9R0 145 aa3.2□□□□□ -1.9
PAXBP1-209ENST00000497873 RPL37AP61513 92 aaKnown RBP3.19□□□□□ -1.9
PAXBP1-209ENST00000497873 SPAG11AQ6PDA7 123 aa3.19□□□□□ -1.9
PAXBP1-209ENST00000497873 FAT2Q9NYQ8 4349 aa3.19□□□□□ -1.9
PAXBP1-209ENST00000497873 SPACA4Q8TDM5 124 aa3.19□□□□□ -1.9
PAXBP1-209ENST00000497873 DNAH8Q96JB1 4490 aa3.19□□□□□ -1.9
PAXBP1-209ENST00000497873 A0A087WSZ3 146 aa3.18□□□□□ -1.9
PAXBP1-209ENST00000497873 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
PAXBP1-209ENST00000497873 ASB16-AS1Q495Z4 193 aa3.18□□□□□ -1.9
PAXBP1-209ENST00000497873 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
PAXBP1-209ENST00000497873 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
PAXBP1-209ENST00000497873 DNAH11Q96DT5 4516 aa3.17□□□□□ -1.9
PAXBP1-209ENST00000497873 PKD1P98161 4303 aa3.17□□□□□ -1.9
PAXBP1-209ENST00000497873 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 Q6ZSA8 131 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 SPRR1BP22528 89 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 PCOTHQ58A44 107 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
PAXBP1-209ENST00000497873 TP53AIP1Q9HCN2 124 aa3.14□□□□□ -1.91
PAXBP1-209ENST00000497873 KIAA1109Q2LD37 5005 aa3.14□□□□□ -1.91
PAXBP1-209ENST00000497873 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
PAXBP1-209ENST00000497873 DNAH5Q8TE73 4624 aa3.12□□□□□ -1.91
PAXBP1-209ENST00000497873 P0C880 135 aa3.12□□□□□ -1.91
PAXBP1-209ENST00000497873 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
PAXBP1-209ENST00000497873 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
PAXBP1-209ENST00000497873 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
PAXBP1-209ENST00000497873 LRP1BQ9NZR2 4599 aa3.1□□□□□ -1.91
PAXBP1-209ENST00000497873 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
PAXBP1-209ENST00000497873 PRLHP81277 87 aa3.09□□□□□ -1.92
PAXBP1-209ENST00000497873 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
PAXBP1-209ENST00000497873 PSORS1C2Q9UIG4 136 aa3.08□□□□□ -1.92
PAXBP1-209ENST00000497873 Q96NJ1 140 aa3.08□□□□□ -1.92
PAXBP1-209ENST00000497873 RYR1P21817 5038 aa3.08□□□□□ -1.92
PAXBP1-209ENST00000497873 RETNLBQ9BQ08 111 aa3.07□□□□□ -1.92
PAXBP1-209ENST00000497873 APOBP04114 4563 aaKnown RBP3.07□□□□□ -1.92
PAXBP1-209ENST00000497873 ACYP2P14621 99 aa3.07□□□□□ -1.92
PAXBP1-209ENST00000497873 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
PAXBP1-209ENST00000497873 HSPG2P98160 4391 aa3.06□□□□□ -1.92
PAXBP1-209ENST00000497873 CSAG1Q6PB30 78 aa3.06□□□□□ -1.92
PAXBP1-209ENST00000497873 HERC2O95714 4834 aa3.06□□□□□ -1.92
PAXBP1-209ENST00000497873 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 MRPL34Q9BQ48 92 aaKnown RBP3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 A0A1B0GU69 56 aa3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 MIR22HGQ0VDD5 57 aa3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
PAXBP1-209ENST00000497873 UQCR11O14957 56 aa3.04□□□□□ -1.92
PAXBP1-209ENST00000497873 SRRM2Q9UQ35 2752 aaKnown RBP3.03□□□□□ -1.92
PAXBP1-209ENST00000497873 Q5VSD8 79 aa3.03□□□□□ -1.92
PAXBP1-209ENST00000497873 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
PAXBP1-209ENST00000497873 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
PAXBP1-209ENST00000497873 SSBP3-AS1Q7Z2R9 100 aa3.03□□□□□ -1.92
PAXBP1-209ENST00000497873 FAT1Q14517 4588 aa3.02□□□□□ -1.93
PAXBP1-209ENST00000497873 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
PAXBP1-209ENST00000497873 SPINK6Q6UWN8 80 aa3.02□□□□□ -1.93
PAXBP1-209ENST00000497873 FLG2Q5D862 2391 aaPredicted RBP3.01□□□□□ -1.93
PAXBP1-209ENST00000497873 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
PAXBP1-209ENST00000497873 KRTAP10-10P60014 251 aa3□□□□□ -1.93
PAXBP1-209ENST00000497873 DMBT1Q9UGM3 2413 aaPredicted RBP2.99□□□□□ -1.93
PAXBP1-209ENST00000497873 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
PAXBP1-209ENST00000497873 VPS13BQ7Z7G8 4022 aa2.98□□□□□ -1.93
PAXBP1-209ENST00000497873 RPS29P62273 56 aaKnown RBP2.98□□□□□ -1.93
PAXBP1-209ENST00000497873 ROMO1P60602 79 aa2.97□□□□□ -1.93
PAXBP1-209ENST00000497873 SPINK1P00995 79 aa2.93□□□□□ -1.94
PAXBP1-209ENST00000497873 LRP1Q07954 4544 aaKnown RBP2.91□□□□□ -1.94
PAXBP1-209ENST00000497873 HERC1Q15751 4861 aa2.91□□□□□ -1.94
PAXBP1-209ENST00000497873 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
PAXBP1-209ENST00000497873 H0YAA0 97 aa2.88□□□□□ -1.95
PAXBP1-209ENST00000497873 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
PAXBP1-209ENST00000497873 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
PAXBP1-209ENST00000497873 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
PAXBP1-209ENST00000497873 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
PAXBP1-209ENST00000497873 TNXBP22105 4242 aa2.84□□□□□ -1.95
PAXBP1-209ENST00000497873 MT1HL1P0DM35 61 aa2.82□□□□□ -1.96
PAXBP1-209ENST00000497873 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
PAXBP1-209ENST00000497873 H1FX-AS1Q4G0G2 97 aa2.82□□□□□ -1.96
PAXBP1-209ENST00000497873 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
PAXBP1-209ENST00000497873 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
PAXBP1-209ENST00000497873 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
PAXBP1-209ENST00000497873 LRP2P98164 4655 aa2.75□□□□□ -1.97
PAXBP1-209ENST00000497873 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
PAXBP1-209ENST00000497873 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
PAXBP1-209ENST00000497873 LPAP08519 4548 aa2.73□□□□□ -1.97
PAXBP1-209ENST00000497873 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
PAXBP1-209ENST00000497873 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
PAXBP1-209ENST00000497873 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
PAXBP1-209ENST00000497873 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
PAXBP1-209ENST00000497873 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
PAXBP1-209ENST00000497873 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
PAXBP1-209ENST00000497873 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
PAXBP1-209ENST00000497873 MUC2Q02817 5179 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms