RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 H0Y9P7 68 aa8.68□□□□□ -1.02
COL20A1-208ENST00000496810 UQCRQO14949 82 aa8.66□□□□□ -1.02
COL20A1-208ENST00000496810 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
COL20A1-208ENST00000496810 A6NN06 94 aa8.64□□□□□ -1.03
COL20A1-208ENST00000496810 ATOX1O00244 68 aa8.6□□□□□ -1.03
COL20A1-208ENST00000496810 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
COL20A1-208ENST00000496810 A0A1B0GV90 55 aa8.58□□□□□ -1.04
COL20A1-208ENST00000496810 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
COL20A1-208ENST00000496810 LINC00208Q96KT6 92 aa8.53□□□□□ -1.04
COL20A1-208ENST00000496810 NEBP20929 6669 aa8.53□□□□□ -1.04
COL20A1-208ENST00000496810 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
COL20A1-208ENST00000496810 NDUFC1O43677 76 aa8.51□□□□□ -1.05
COL20A1-208ENST00000496810 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
COL20A1-208ENST00000496810 CRIPTQ9P021 101 aa8.5□□□□□ -1.05
COL20A1-208ENST00000496810 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
COL20A1-208ENST00000496810 H0YAA0 97 aa8.46□□□□□ -1.06
COL20A1-208ENST00000496810 A8MUN3 132 aa8.45□□□□□ -1.06
COL20A1-208ENST00000496810 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
COL20A1-208ENST00000496810 MP68P56378 58 aa8.41□□□□□ -1.06
COL20A1-208ENST00000496810 KMT2DO14686 5537 aa8.3□□□□□ -1.08
COL20A1-208ENST00000496810 P0C880 135 aa8.29□□□□□ -1.08
COL20A1-208ENST00000496810 KRTAP5-9P26371 169 aa8.28□□□□□ -1.08
COL20A1-208ENST00000496810 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
COL20A1-208ENST00000496810 H3BPC8 53 aa8.26□□□□□ -1.09
COL20A1-208ENST00000496810 J3QR89 54 aa8.26□□□□□ -1.09
COL20A1-208ENST00000496810 MT1XP80297 61 aa8.25□□□□□ -1.09
COL20A1-208ENST00000496810 SCGB1A1P11684 91 aa8.22□□□□□ -1.09
COL20A1-208ENST00000496810 MDN1Q9NU22 5596 aa8.21□□□□□ -1.09
COL20A1-208ENST00000496810 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
COL20A1-208ENST00000496810 R4GN34 69 aa8.17□□□□□ -1.1
COL20A1-208ENST00000496810 M0QZ58 72 aa8.15□□□□□ -1.1
COL20A1-208ENST00000496810 MT-ATP8P03928 68 aa8.13□□□□□ -1.11
COL20A1-208ENST00000496810 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
COL20A1-208ENST00000496810 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
COL20A1-208ENST00000496810 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
COL20A1-208ENST00000496810 K7ERU9 68 aa8.08□□□□□ -1.12
COL20A1-208ENST00000496810 KRTAP20-1Q3LI63 56 aa8.06□□□□□ -1.12
COL20A1-208ENST00000496810 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
COL20A1-208ENST00000496810 TRAV7A0A075B6U4 112 aa8.04□□□□□ -1.12
COL20A1-208ENST00000496810 SPRR2FQ96RM1 72 aa8.03□□□□□ -1.12
COL20A1-208ENST00000496810 ACYP2P14621 99 aa7.98□□□□□ -1.13
COL20A1-208ENST00000496810 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
COL20A1-208ENST00000496810 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
COL20A1-208ENST00000496810 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
COL20A1-208ENST00000496810 SNURFQ9Y675 71 aa7.94□□□□□ -1.14
COL20A1-208ENST00000496810 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
COL20A1-208ENST00000496810 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
COL20A1-208ENST00000496810 SPRR2EP22531 72 aa7.92□□□□□ -1.14
COL20A1-208ENST00000496810 SPRR2BP35325 72 aa7.92□□□□□ -1.14
COL20A1-208ENST00000496810 SPRR2AP35326 72 aa7.92□□□□□ -1.14
COL20A1-208ENST00000496810 KRTAP10-7P60409 375 aaPredicted RBP7.88□□□□□ -1.15
COL20A1-208ENST00000496810 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
COL20A1-208ENST00000496810 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
COL20A1-208ENST00000496810 LCE1AQ5T7P2 110 aa7.83□□□□□ -1.16
COL20A1-208ENST00000496810 KRTAP2-3P0C7H8 128 aa7.79□□□□□ -1.16
COL20A1-208ENST00000496810 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
COL20A1-208ENST00000496810 KRTAP2-4Q9BYR9 128 aa7.79□□□□□ -1.16
COL20A1-208ENST00000496810 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
COL20A1-208ENST00000496810 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
COL20A1-208ENST00000496810 SERP2Q8N6R1 65 aa7.73□□□□□ -1.17
COL20A1-208ENST00000496810 SPRR2DP22532 72 aa7.65□□□□□ -1.18
COL20A1-208ENST00000496810 COA5Q86WW8 74 aa7.61□□□□□ -1.19
COL20A1-208ENST00000496810 KRTAP2-2Q9BYT5 123 aa7.54□□□□□ -1.2
COL20A1-208ENST00000496810 KRTAP2-1Q9BYU5 128 aa7.54□□□□□ -1.2
COL20A1-208ENST00000496810 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
COL20A1-208ENST00000496810 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
COL20A1-208ENST00000496810 COX7CP15954 63 aa7.46□□□□□ -1.22
COL20A1-208ENST00000496810 A0A0D9SG42 100 aa7.45□□□□□ -1.22
COL20A1-208ENST00000496810 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
COL20A1-208ENST00000496810 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
COL20A1-208ENST00000496810 H7BZZ5 65 aa7.42□□□□□ -1.22
COL20A1-208ENST00000496810 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
COL20A1-208ENST00000496810 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
COL20A1-208ENST00000496810 SEC61GP60059 68 aa7.36□□□□□ -1.23
COL20A1-208ENST00000496810 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
COL20A1-208ENST00000496810 A0A1B0GU33 70 aa7.32□□□□□ -1.24
COL20A1-208ENST00000496810 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
COL20A1-208ENST00000496810 MT1EP04732 61 aa7.3□□□□□ -1.24
COL20A1-208ENST00000496810 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
COL20A1-208ENST00000496810 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
COL20A1-208ENST00000496810 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
COL20A1-208ENST00000496810 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
COL20A1-208ENST00000496810 A8MU10 97 aa7.17□□□□□ -1.26
COL20A1-208ENST00000496810 A0A1B0GU69 56 aa7.16□□□□□ -1.26
COL20A1-208ENST00000496810 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
COL20A1-208ENST00000496810 PCP4P48539 62 aa7.14□□□□□ -1.27
COL20A1-208ENST00000496810 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
COL20A1-208ENST00000496810 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
COL20A1-208ENST00000496810 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
COL20A1-208ENST00000496810 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
COL20A1-208ENST00000496810 TMEM258P61165 79 aa7□□□□□ -1.29
COL20A1-208ENST00000496810 MT1GP13640 62 aa6.99□□□□□ -1.29
COL20A1-208ENST00000496810 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
COL20A1-208ENST00000496810 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
COL20A1-208ENST00000496810 MT1LQ93083 61 aa6.96□□□□□ -1.3
COL20A1-208ENST00000496810 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
COL20A1-208ENST00000496810 MT1MQ8N339 61 aa6.95□□□□□ -1.3
COL20A1-208ENST00000496810 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
COL20A1-208ENST00000496810 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
COL20A1-208ENST00000496810 TNP1P09430 55 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms