RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 HRNRQ86YZ3 2850 aaPredicted RBP4.05□□□□□ -1.76
PEX1-210ENST00000496420 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
PEX1-210ENST00000496420 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
PEX1-210ENST00000496420 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
PEX1-210ENST00000496420 TNXBP22105 4242 aa3.98□□□□□ -1.77
PEX1-210ENST00000496420 PKD1P98161 4303 aa3.98□□□□□ -1.77
PEX1-210ENST00000496420 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
PEX1-210ENST00000496420 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
PEX1-210ENST00000496420 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
PEX1-210ENST00000496420 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
PEX1-210ENST00000496420 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
PEX1-210ENST00000496420 LORP23490 312 aaPredicted RBP3.92□□□□□ -1.78
PEX1-210ENST00000496420 FAT2Q9NYQ8 4349 aa3.91□□□□□ -1.78
PEX1-210ENST00000496420 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
PEX1-210ENST00000496420 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
PEX1-210ENST00000496420 COL7A1Q02388 2944 aa3.89□□□□□ -1.79
PEX1-210ENST00000496420 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
PEX1-210ENST00000496420 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
PEX1-210ENST00000496420 KRTAP3-3Q9BYR6 98 aa3.86□□□□□ -1.79
PEX1-210ENST00000496420 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
PEX1-210ENST00000496420 DNAH2Q9P225 4427 aa3.85□□□□□ -1.79
PEX1-210ENST00000496420 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.8
PEX1-210ENST00000496420 KRTAP12-1P59990 96 aa3.84□□□□□ -1.8
PEX1-210ENST00000496420 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
PEX1-210ENST00000496420 DNAH11Q96DT5 4516 aa3.76□□□□□ -1.81
PEX1-210ENST00000496420 MEGF8Q7Z7M0 2845 aa3.76□□□□□ -1.81
PEX1-210ENST00000496420 HSPG2P98160 4391 aa3.75□□□□□ -1.81
PEX1-210ENST00000496420 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
PEX1-210ENST00000496420 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
PEX1-210ENST00000496420 MT1HP80294 61 aa3.7□□□□□ -1.82
PEX1-210ENST00000496420 SACSQ9NZJ4 4579 aa3.69□□□□□ -1.82
PEX1-210ENST00000496420 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
PEX1-210ENST00000496420 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
PEX1-210ENST00000496420 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
PEX1-210ENST00000496420 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
PEX1-210ENST00000496420 MT2AP02795 61 aa3.59□□□□□ -1.84
PEX1-210ENST00000496420 FLGP20930 4061 aaPredicted RBP3.58□□□□□ -1.84
PEX1-210ENST00000496420 PLECQ15149 4684 aaKnown RBP3.55□□□□□ -1.84
PEX1-210ENST00000496420 DNHD1Q96M86 4753 aa3.53□□□□□ -1.84
PEX1-210ENST00000496420 SPRR2EP22531 72 aa3.53□□□□□ -1.84
PEX1-210ENST00000496420 SPRR2BP35325 72 aa3.53□□□□□ -1.84
PEX1-210ENST00000496420 SPRR2AP35326 72 aa3.53□□□□□ -1.84
PEX1-210ENST00000496420 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
PEX1-210ENST00000496420 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
PEX1-210ENST00000496420 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
PEX1-210ENST00000496420 RYR2Q92736 4967 aa3.48□□□□□ -1.85
PEX1-210ENST00000496420 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
PEX1-210ENST00000496420 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
PEX1-210ENST00000496420 MT1FP04733 61 aa3.46□□□□□ -1.86
PEX1-210ENST00000496420 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
PEX1-210ENST00000496420 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
PEX1-210ENST00000496420 SPRR2DP22532 72 aa3.44□□□□□ -1.86
PEX1-210ENST00000496420 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
PEX1-210ENST00000496420 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
PEX1-210ENST00000496420 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
PEX1-210ENST00000496420 RYR1P21817 5038 aa3.39□□□□□ -1.87
PEX1-210ENST00000496420 RYR3Q15413 4870 aa3.37□□□□□ -1.87
PEX1-210ENST00000496420 LCE2BO14633 110 aa3.37□□□□□ -1.87
PEX1-210ENST00000496420 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
PEX1-210ENST00000496420 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
PEX1-210ENST00000496420 INE1O15225 51 aa3.34□□□□□ -1.88
PEX1-210ENST00000496420 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
PEX1-210ENST00000496420 STARD9Q9P2P6 4700 aa3.32□□□□□ -1.88
PEX1-210ENST00000496420 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
PEX1-210ENST00000496420 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
PEX1-210ENST00000496420 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
PEX1-210ENST00000496420 APOBP04114 4563 aaKnown RBP3.3□□□□□ -1.88
PEX1-210ENST00000496420 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
PEX1-210ENST00000496420 HERC1Q15751 4861 aa3.27□□□□□ -1.89
PEX1-210ENST00000496420 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
PEX1-210ENST00000496420 FAT1Q14517 4588 aa3.25□□□□□ -1.89
PEX1-210ENST00000496420 HERC2O95714 4834 aa3.25□□□□□ -1.89
PEX1-210ENST00000496420 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
PEX1-210ENST00000496420 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
PEX1-210ENST00000496420 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
PEX1-210ENST00000496420 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
PEX1-210ENST00000496420 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
PEX1-210ENST00000496420 KIAA1109Q2LD37 5005 aa3.17□□□□□ -1.9
PEX1-210ENST00000496420 LRP1Q07954 4544 aaKnown RBP3.16□□□□□ -1.9
PEX1-210ENST00000496420 MT1GP13640 62 aa3.16□□□□□ -1.9
PEX1-210ENST00000496420 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
PEX1-210ENST00000496420 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
PEX1-210ENST00000496420 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
PEX1-210ENST00000496420 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
PEX1-210ENST00000496420 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
PEX1-210ENST00000496420 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
PEX1-210ENST00000496420 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
PEX1-210ENST00000496420 MT1BP07438 61 aa3.06□□□□□ -1.92
PEX1-210ENST00000496420 MT1XP80297 61 aa3.03□□□□□ -1.92
PEX1-210ENST00000496420 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
PEX1-210ENST00000496420 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
PEX1-210ENST00000496420 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
PEX1-210ENST00000496420 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
PEX1-210ENST00000496420 LPAP08519 4548 aa2.98□□□□□ -1.93
PEX1-210ENST00000496420 MT4P47944 62 aa2.97□□□□□ -1.93
PEX1-210ENST00000496420 MUC17Q685J3 4493 aa2.96□□□□□ -1.93
PEX1-210ENST00000496420 LRP2P98164 4655 aa2.95□□□□□ -1.94
PEX1-210ENST00000496420 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
PEX1-210ENST00000496420 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
PEX1-210ENST00000496420 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms