RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 Q75L30 129 aa3.35□□□□□ -1.87
FN1-225ENST00000494446 Q96NJ1 140 aa3.35□□□□□ -1.87
FN1-225ENST00000494446 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
FN1-225ENST00000494446 H7BZZ5 65 aa3.34□□□□□ -1.87
FN1-225ENST00000494446 PRR15Q8IV56 129 aa3.34□□□□□ -1.87
FN1-225ENST00000494446 NDUFC1O43677 76 aa3.33□□□□□ -1.88
FN1-225ENST00000494446 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
FN1-225ENST00000494446 TMEM254Q8TBM7 123 aa3.33□□□□□ -1.88
FN1-225ENST00000494446 MMP24-AS1A0A0U1RRL7 71 aa3.32□□□□□ -1.88
FN1-225ENST00000494446 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
FN1-225ENST00000494446 KMT2DO14686 5537 aa3.31□□□□□ -1.88
FN1-225ENST00000494446 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
FN1-225ENST00000494446 RPS28P62857 69 aaKnown RBP3.31□□□□□ -1.88
FN1-225ENST00000494446 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
FN1-225ENST00000494446 NDUFB1O75438 58 aa3.3□□□□□ -1.88
FN1-225ENST00000494446 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
FN1-225ENST00000494446 C5orf47Q569G3 176 aa3.3□□□□□ -1.88
FN1-225ENST00000494446 CASC2Q6XLA1 102 aa3.3□□□□□ -1.88
FN1-225ENST00000494446 WFDC13Q8IUB5 93 aa3.3□□□□□ -1.88
FN1-225ENST00000494446 ZCCHC13Q8WW36 166 aaKnown RBP3.3□□□□□ -1.88
FN1-225ENST00000494446 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
FN1-225ENST00000494446 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
FN1-225ENST00000494446 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
FN1-225ENST00000494446 A6NN06 94 aa3.28□□□□□ -1.88
FN1-225ENST00000494446 H3BPC8 53 aa3.28□□□□□ -1.88
FN1-225ENST00000494446 C8orf17Q9NRJ1 99 aa3.28□□□□□ -1.88
FN1-225ENST00000494446 hDV103S1A0JD37 113 aa3.27□□□□□ -1.89
FN1-225ENST00000494446 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
FN1-225ENST00000494446 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
FN1-225ENST00000494446 MP68P56378 58 aa3.25□□□□□ -1.89
FN1-225ENST00000494446 TP53AIP1Q9HCN2 124 aa3.25□□□□□ -1.89
FN1-225ENST00000494446 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
FN1-225ENST00000494446 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 A8MUU9 505 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 H0Y9P7 68 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 HRES1P13985 223 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 MPLKIPQ8TAP9 179 aa3.24□□□□□ -1.89
FN1-225ENST00000494446 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
FN1-225ENST00000494446 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
FN1-225ENST00000494446 KRTAP16-1A8MUX0 517 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 SPRR2EP22531 72 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 SPRR2BP35325 72 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 SPRR2AP35326 72 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 LINC00208Q96KT6 92 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
FN1-225ENST00000494446 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
FN1-225ENST00000494446 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
FN1-225ENST00000494446 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
FN1-225ENST00000494446 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
FN1-225ENST00000494446 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
FN1-225ENST00000494446 LINC00313P59037 77 aa3.18□□□□□ -1.9
FN1-225ENST00000494446 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
FN1-225ENST00000494446 NDUFS5O43920 106 aa3.17□□□□□ -1.9
FN1-225ENST00000494446 Q5W150 140 aa3.16□□□□□ -1.9
FN1-225ENST00000494446 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
FN1-225ENST00000494446 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
FN1-225ENST00000494446 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
FN1-225ENST00000494446 MT1BP07438 61 aa3.12□□□□□ -1.91
FN1-225ENST00000494446 SPRR2DP22532 72 aa3.12□□□□□ -1.91
FN1-225ENST00000494446 C4orf26Q17RF5 130 aa3.11□□□□□ -1.91
FN1-225ENST00000494446 Q5VV11 94 aa3.11□□□□□ -1.91
FN1-225ENST00000494446 Q1T7F1 81 aa3.1□□□□□ -1.91
FN1-225ENST00000494446 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
FN1-225ENST00000494446 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
FN1-225ENST00000494446 COA5Q86WW8 74 aa3.09□□□□□ -1.91
FN1-225ENST00000494446 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
FN1-225ENST00000494446 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
FN1-225ENST00000494446 V9GYY9 64 aa3.07□□□□□ -1.92
FN1-225ENST00000494446 SPINK7P58062 85 aa3.06□□□□□ -1.92
FN1-225ENST00000494446 C7orf65Q6ZTY9 151 aa3.06□□□□□ -1.92
FN1-225ENST00000494446 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
FN1-225ENST00000494446 ACYP2P14621 99 aa3.04□□□□□ -1.92
FN1-225ENST00000494446 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
FN1-225ENST00000494446 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
FN1-225ENST00000494446 IGKV2D-30A0A075B6S6 120 aa3.03□□□□□ -1.92
FN1-225ENST00000494446 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
FN1-225ENST00000494446 A8MUN3 132 aa3.01□□□□□ -1.93
FN1-225ENST00000494446 H1FX-AS1Q4G0G2 97 aa3□□□□□ -1.93
FN1-225ENST00000494446 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
FN1-225ENST00000494446 PSPHP1O15172 72 aa2.99□□□□□ -1.93
FN1-225ENST00000494446 CHKB-CPT1BH3BT56 60 aa2.98□□□□□ -1.93
FN1-225ENST00000494446 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
FN1-225ENST00000494446 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
FN1-225ENST00000494446 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
FN1-225ENST00000494446 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
FN1-225ENST00000494446 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
FN1-225ENST00000494446 A0A1B0GU69 56 aa2.91□□□□□ -1.94
FN1-225ENST00000494446 A6NED7 52 aa2.91□□□□□ -1.94
FN1-225ENST00000494446 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
FN1-225ENST00000494446 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
FN1-225ENST00000494446 LCA10Q71F78 164 aa2.9□□□□□ -1.95
FN1-225ENST00000494446 A8MU10 97 aa2.89□□□□□ -1.95
FN1-225ENST00000494446 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
FN1-225ENST00000494446 UQCR11O14957 56 aa2.85□□□□□ -1.95
FN1-225ENST00000494446 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
FN1-225ENST00000494446 SEC61GP60059 68 aa2.84□□□□□ -1.95
FN1-225ENST00000494446 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
FN1-225ENST00000494446 S4R3F8 94 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms