RNA–Protein interactions for RNA: ENST00000494223.1

ALS2CR12-210, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

TSL 3

Gene ALS2CR12, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-210ENST00000494223 LYSTQ99698 3801 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 EP400Q96L91 3159 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 SRCAPQ6ZRS2 3230 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 NF1P21359 2839 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 UNC80Q8N2C7 3258 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 DCHS2Q6V1P9 2916 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 USP9XQ93008 2570 aaPredicted RBP0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 SYNE2Q8WXH0 6885 aaKnown RBP0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 FREM2Q5SZK8 3169 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 RANBP2P49792 3224 aaKnown RBP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 HIVEP3Q5T1R4 2406 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 SZT2Q5T011 3432 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 CRYBG3Q68DQ2 2970 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 LRP1Q07954 4544 aaKnown RBP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 HTTP42858 3142 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 VPS13AQ96RL7 3174 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 SPTBN5Q9NRC6 3674 aaKnown RBP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 ZNF292O60281 2723 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 MT1XP80297 61 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 KRTAP19-8Q3LI54 63 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 NIPBLQ6KC79 2804 aaeCLIP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 ACANP16112 2415 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 FLGP20930 4061 aaPredicted RBP0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 LAMA1P25391 3075 aa0.28□□□□□ -2.36
ALS2CR12-210ENST00000494223 REV3LO60673 3130 aa0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 STAB2Q8WWQ8 2551 aa0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 HUWE1Q7Z6Z7 4374 aaKnown RBP0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 ITPR3Q14573 2671 aa0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 GCN1Q92616 2671 aaKnown RBP0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 GOLGB1Q14789 3259 aaKnown RBP0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH3Q8TD57 4116 aa0.28□□□□□ -2.37
ALS2CR12-210ENST00000494223 DMBT1Q9UGM3 2413 aaPredicted RBP0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 BSNQ9UPA5 3926 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 SPEGQ15772 3267 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH7Q8WXX0 4024 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 CSMD1Q96PZ7 3565 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 ZANQ9Y493 2812 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT2AP02795 61 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1GP13640 62 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH6Q9C0G6 4158 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 UTRNP46939 3433 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 CEP290O15078 2479 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 PKD1L2Q7Z442 2459 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 TLN2Q9Y4G6 2542 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 SACSQ9NZJ4 4579 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 MAST4O15021 2626 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 DMDP11532 3685 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 TEP1Q99973 2627 aaKnown RBP0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 NSD1Q96L73 2696 aaPredicted RBP0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 CFAP46Q8IYW2 2715 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 ATMQ13315 3056 aa0.27□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH10Q8IVF4 4471 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 TLN1Q9Y490 2541 aaKnown RBP0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 PKD1P98161 4303 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 ANK3Q12955 4377 aaKnown RBP0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MXRA5Q9NR99 2828 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 WDFY3Q8IZQ1 3526 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1AP04731 61 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1EP04732 61 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1FP04733 61 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1BP07438 61 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1LQ93083 61 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 TRRAPQ9Y4A5 3859 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 VPS13BQ7Z7G8 4022 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 MGAM2Q2M2H8 2515 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 USP9YO00507 2555 aaPredicted RBP0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 EPG5Q9HCE0 2579 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 CEP295Q9C0D2 2601 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 HIVEP1P15822 2718 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH17Q9UFH2 4485 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 FAT3Q8TDW7 4589 aa0.26□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH2Q9P225 4427 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 DYNC2H1Q8NCM8 4307 aaKnown RBP0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 XIRP2A4UGR9 3374 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 ANKRD11Q6UB99 2663 aaPredicted RBP0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 MTORP42345 2549 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH1Q9P2D7 4330 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 MT1HP80294 61 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 KRTAP6-2Q3LI66 62 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH5Q8TE73 4624 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 DNAH11Q96DT5 4516 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 HSPG2P98160 4391 aa0.25□□□□□ -2.37
ALS2CR12-210ENST00000494223 KMT2AQ03164 3969 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms