RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 NBEAL2Q6ZNJ1 2754 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 KRTAP10-1P60331 282 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 COA5Q86WW8 74 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 WFDC10BQ8IUB3 73 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 MUC2Q02817 5179 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 SPINK7P58062 85 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 Q5W150 140 aa1.39□□□□□ -2.19
CDC42EP3-205ENST00000494083 H0Y9P7 68 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 K7EIL1 84 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 NAV2Q8IVL1 2488 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 PKD1L1Q8TDX9 2849 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 PANO1I0J062 215 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 DEFB4AO15263 64 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 ROMO1P60602 79 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 CASC2Q6XLA1 102 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 POLQO75417 2590 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 ABCA12Q86UK0 2595 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 LRP2P98164 4655 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 DOPEY1Q5JWR5 2465 aa1.38□□□□□ -2.19
CDC42EP3-205ENST00000494083 HTN3P15516 51 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 SMR3AQ99954 134 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 LRRK2Q5S007 2527 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 NCOR2Q9Y618 2525 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 A0A0G2JQZ4 141 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 A0A1W2PNN7 141 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 RPS29P62273 56 aaKnown RBP1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 F8P00451 2351 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 LPAP08519 4548 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 FLNCQ14315 2725 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 A0A1B0GU33 70 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 SPACA4Q8TDM5 124 aa1.37□□□□□ -2.19
CDC42EP3-205ENST00000494083 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 PCOTHQ58A44 107 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 TEP1Q99973 2627 aaKnown RBP1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 P0C880 135 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 Q6ZSA8 131 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 CCDC168Q8NDH2 2452 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 SPRR5A0A1B0GTR4 108 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 H0YAA0 97 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 C1orf134Q5TEV5 83 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 HIVEP2P31629 2446 aa1.36□□□□□ -2.19
CDC42EP3-205ENST00000494083 CHD8Q9HCK8 2581 aa1.35□□□□□ -2.19
CDC42EP3-205ENST00000494083 CENPEQ02224 2701 aa1.35□□□□□ -2.19
CDC42EP3-205ENST00000494083 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
CDC42EP3-205ENST00000494083 MTORP42345 2549 aa1.35□□□□□ -2.19
CDC42EP3-205ENST00000494083 SPART-AS1P0CW21 52 aa1.34□□□□□ -2.19
CDC42EP3-205ENST00000494083 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.2
CDC42EP3-205ENST00000494083 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.2
CDC42EP3-205ENST00000494083 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 C20orf166-AS1Q96NR2 134 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 TGP01266 2768 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 KRTAP19-2Q3LHN2 52 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 PRLHP81277 87 aa1.33□□□□□ -2.2
CDC42EP3-205ENST00000494083 LY6G6CO95867 125 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 MIR22HGQ0VDD5 57 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 SPINT4Q6UDR6 99 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 PSORS1C2Q9UIG4 136 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 A0A096LNI7 61 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 TENM3Q9P273 2699 aa1.32□□□□□ -2.2
CDC42EP3-205ENST00000494083 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 NSD1Q96L73 2696 aaPredicted RBP1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 CSAG1Q6PB30 78 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 LINC00304Q8N9R0 145 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 ITPR3Q14573 2671 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 A0A1B0GU69 56 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 ACANP16112 2415 aa1.31□□□□□ -2.2
CDC42EP3-205ENST00000494083 A0A087WTM6 91 aa1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 FLNAP21333 2647 aaKnown RBP1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 ACYP2P14621 99 aa1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 UQCR11O14957 56 aa1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 KRTAP13-2Q52LG2 175 aa1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
CDC42EP3-205ENST00000494083 PP632Q6XCG6 107 aa1.29□□□□□ -2.2
CDC42EP3-205ENST00000494083 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
CDC42EP3-205ENST00000494083 ITPR2Q14571 2701 aa1.28□□□□□ -2.2
CDC42EP3-205ENST00000494083 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
CDC42EP3-205ENST00000494083 KRTAP5-8O75690 187 aa1.28□□□□□ -2.21
CDC42EP3-205ENST00000494083 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.21
CDC42EP3-205ENST00000494083 TPRXLQ17RH7 258 aa1.27□□□□□ -2.21
CDC42EP3-205ENST00000494083 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
CDC42EP3-205ENST00000494083 NUPR2A6NF83 97 aa1.27□□□□□ -2.21
CDC42EP3-205ENST00000494083 R4GN34 69 aa1.27□□□□□ -2.21
CDC42EP3-205ENST00000494083 SPINK6Q6UWN8 80 aa1.26□□□□□ -2.21
CDC42EP3-205ENST00000494083 COX6B2Q6YFQ2 88 aa1.26□□□□□ -2.21
CDC42EP3-205ENST00000494083 ATRQ13535 2644 aa1.26□□□□□ -2.21
CDC42EP3-205ENST00000494083 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
CDC42EP3-205ENST00000494083 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CDC42EP3-205ENST00000494083 SPINK1P00995 79 aa1.24□□□□□ -2.21
CDC42EP3-205ENST00000494083 SSBP3-AS1Q7Z2R9 100 aa1.24□□□□□ -2.21
CDC42EP3-205ENST00000494083 FLG2Q5D862 2391 aaPredicted RBP1.23□□□□□ -2.21
CDC42EP3-205ENST00000494083 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
CDC42EP3-205ENST00000494083 NOTCH1P46531 2555 aa1.23□□□□□ -2.21
CDC42EP3-205ENST00000494083 CRIPTQ9P021 101 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms