RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 Q5VV11 94 aa4.35□□□□□ -1.71
UFD1-210ENST00000494054 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
UFD1-210ENST00000494054 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
UFD1-210ENST00000494054 LOC101927531A0A1B0GV80 90 aa4.32□□□□□ -1.72
UFD1-210ENST00000494054 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
UFD1-210ENST00000494054 ACYP1P07311 99 aa4.3□□□□□ -1.72
UFD1-210ENST00000494054 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
UFD1-210ENST00000494054 J3QR89 54 aa4.28□□□□□ -1.72
UFD1-210ENST00000494054 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
UFD1-210ENST00000494054 FAM240AA0A1B0GVK7 77 aa4.27□□□□□ -1.73
UFD1-210ENST00000494054 H0Y9P7 68 aa4.27□□□□□ -1.73
UFD1-210ENST00000494054 UQCRQO14949 82 aa4.27□□□□□ -1.73
UFD1-210ENST00000494054 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
UFD1-210ENST00000494054 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
UFD1-210ENST00000494054 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
UFD1-210ENST00000494054 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
UFD1-210ENST00000494054 ATOX1O00244 68 aa4.23□□□□□ -1.73
UFD1-210ENST00000494054 NDUFC1O43677 76 aa4.23□□□□□ -1.73
UFD1-210ENST00000494054 H0YAA0 97 aa4.21□□□□□ -1.74
UFD1-210ENST00000494054 LINC00643Q86TS7 51 aa4.21□□□□□ -1.74
UFD1-210ENST00000494054 KMT2DO14686 5537 aa4.2□□□□□ -1.74
UFD1-210ENST00000494054 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
UFD1-210ENST00000494054 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
UFD1-210ENST00000494054 A8MUN3 132 aa4.18□□□□□ -1.74
UFD1-210ENST00000494054 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
UFD1-210ENST00000494054 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
UFD1-210ENST00000494054 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
UFD1-210ENST00000494054 MP68P56378 58 aa4.14□□□□□ -1.75
UFD1-210ENST00000494054 MT1XP80297 61 aa4.11□□□□□ -1.75
UFD1-210ENST00000494054 P0C880 135 aa4.1□□□□□ -1.75
UFD1-210ENST00000494054 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
UFD1-210ENST00000494054 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
UFD1-210ENST00000494054 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
UFD1-210ENST00000494054 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
UFD1-210ENST00000494054 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
UFD1-210ENST00000494054 H3BPC8 53 aa4.06□□□□□ -1.76
UFD1-210ENST00000494054 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
UFD1-210ENST00000494054 R4GN34 69 aa4.06□□□□□ -1.76
UFD1-210ENST00000494054 ANAPC13Q9BS18 74 aa4.05□□□□□ -1.76
UFD1-210ENST00000494054 M0QZ58 72 aa4.04□□□□□ -1.76
UFD1-210ENST00000494054 MT-ATP8P03928 68 aa4.04□□□□□ -1.76
UFD1-210ENST00000494054 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
UFD1-210ENST00000494054 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
UFD1-210ENST00000494054 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
UFD1-210ENST00000494054 KRTAP12-2P59991 146 aa4□□□□□ -1.77
UFD1-210ENST00000494054 LINC01554Q52M75 96 aa4□□□□□ -1.77
UFD1-210ENST00000494054 SPRR2EP22531 72 aa3.99□□□□□ -1.77
UFD1-210ENST00000494054 SPRR2BP35325 72 aa3.99□□□□□ -1.77
UFD1-210ENST00000494054 SPRR2AP35326 72 aa3.99□□□□□ -1.77
UFD1-210ENST00000494054 SEC61GP60059 68 aa3.99□□□□□ -1.77
UFD1-210ENST00000494054 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
UFD1-210ENST00000494054 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
UFD1-210ENST00000494054 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
UFD1-210ENST00000494054 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
UFD1-210ENST00000494054 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
UFD1-210ENST00000494054 ACYP2P14621 99 aa3.94□□□□□ -1.78
UFD1-210ENST00000494054 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
UFD1-210ENST00000494054 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
UFD1-210ENST00000494054 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
UFD1-210ENST00000494054 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
UFD1-210ENST00000494054 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
UFD1-210ENST00000494054 H3BS24 57 aa3.89□□□□□ -1.79
UFD1-210ENST00000494054 SMIM20Q8N5G0 67 aa3.89□□□□□ -1.79
UFD1-210ENST00000494054 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
UFD1-210ENST00000494054 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
UFD1-210ENST00000494054 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
UFD1-210ENST00000494054 COX7CP15954 63 aa3.86□□□□□ -1.79
UFD1-210ENST00000494054 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
UFD1-210ENST00000494054 SPRR2DP22532 72 aa3.85□□□□□ -1.79
UFD1-210ENST00000494054 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
UFD1-210ENST00000494054 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
UFD1-210ENST00000494054 V9GYY9 64 aa3.81□□□□□ -1.8
UFD1-210ENST00000494054 TMEM258P61165 79 aa3.8□□□□□ -1.8
UFD1-210ENST00000494054 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
UFD1-210ENST00000494054 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
UFD1-210ENST00000494054 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
UFD1-210ENST00000494054 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
UFD1-210ENST00000494054 COA5Q86WW8 74 aa3.71□□□□□ -1.82
UFD1-210ENST00000494054 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
UFD1-210ENST00000494054 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
UFD1-210ENST00000494054 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
UFD1-210ENST00000494054 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
UFD1-210ENST00000494054 A0A0D9SG42 100 aa3.67□□□□□ -1.82
UFD1-210ENST00000494054 CYSTM1Q9H1C7 97 aa3.66□□□□□ -1.82
UFD1-210ENST00000494054 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
UFD1-210ENST00000494054 H7BZZ5 65 aa3.65□□□□□ -1.83
UFD1-210ENST00000494054 MT1EP04732 61 aa3.65□□□□□ -1.83
UFD1-210ENST00000494054 SPATA8Q6RVD6 105 aa3.65□□□□□ -1.83
UFD1-210ENST00000494054 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
UFD1-210ENST00000494054 A0A1B0GU33 70 aa3.62□□□□□ -1.83
UFD1-210ENST00000494054 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
UFD1-210ENST00000494054 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
UFD1-210ENST00000494054 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
UFD1-210ENST00000494054 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
UFD1-210ENST00000494054 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
UFD1-210ENST00000494054 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
UFD1-210ENST00000494054 A8MU10 97 aa3.52□□□□□ -1.85
UFD1-210ENST00000494054 MT1GP13640 62 aa3.52□□□□□ -1.85
UFD1-210ENST00000494054 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
UFD1-210ENST00000494054 A0A1B0GU69 56 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms