RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 H3BT86 120 aa7.73□□□□□ -1.17
COL9A1-210ENST00000493682 LCA10Q71F78 164 aa7.72□□□□□ -1.17
COL9A1-210ENST00000493682 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
COL9A1-210ENST00000493682 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
COL9A1-210ENST00000493682 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
COL9A1-210ENST00000493682 BATFQ16520 125 aa7.66□□□□□ -1.18
COL9A1-210ENST00000493682 KMT2DO14686 5537 aa7.65□□□□□ -1.19
COL9A1-210ENST00000493682 MDN1Q9NU22 5596 aa7.64□□□□□ -1.19
COL9A1-210ENST00000493682 A0A1W2PPM0 123 aa7.6□□□□□ -1.19
COL9A1-210ENST00000493682 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
COL9A1-210ENST00000493682 TAX1BP3O14907 124 aa7.57□□□□□ -1.2
COL9A1-210ENST00000493682 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
COL9A1-210ENST00000493682 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
COL9A1-210ENST00000493682 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
COL9A1-210ENST00000493682 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
COL9A1-210ENST00000493682 KRTAP5-3Q6L8H2 238 aa7.49□□□□□ -1.21
COL9A1-210ENST00000493682 A0A087WVE0 104 aa7.48□□□□□ -1.21
COL9A1-210ENST00000493682 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
COL9A1-210ENST00000493682 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
COL9A1-210ENST00000493682 COL5A1-AS1Q5SY13 56 aa7.47□□□□□ -1.21
COL9A1-210ENST00000493682 SPCS1Q9Y6A9 102 aa7.47□□□□□ -1.21
COL9A1-210ENST00000493682 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
COL9A1-210ENST00000493682 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
COL9A1-210ENST00000493682 PRO0461Q9UI25 63 aa7.39□□□□□ -1.23
COL9A1-210ENST00000493682 SPRR2EP22531 72 aa7.38□□□□□ -1.23
COL9A1-210ENST00000493682 SPRR2BP35325 72 aa7.38□□□□□ -1.23
COL9A1-210ENST00000493682 SPRR2AP35326 72 aa7.38□□□□□ -1.23
COL9A1-210ENST00000493682 H0YAA0 97 aa7.35□□□□□ -1.23
COL9A1-210ENST00000493682 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
COL9A1-210ENST00000493682 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
COL9A1-210ENST00000493682 NDUFC1O43677 76 aa7.32□□□□□ -1.24
COL9A1-210ENST00000493682 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
COL9A1-210ENST00000493682 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
COL9A1-210ENST00000493682 MT1XP80297 61 aa7.31□□□□□ -1.24
COL9A1-210ENST00000493682 K7EP34 96 aa7.3□□□□□ -1.24
COL9A1-210ENST00000493682 A8MUN3 132 aa7.28□□□□□ -1.24
COL9A1-210ENST00000493682 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
COL9A1-210ENST00000493682 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
COL9A1-210ENST00000493682 GTF2H5Q6ZYL4 71 aa7.25□□□□□ -1.25
COL9A1-210ENST00000493682 LCE1AQ5T7P2 110 aa7.24□□□□□ -1.25
COL9A1-210ENST00000493682 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
COL9A1-210ENST00000493682 KRTAP2-2Q9BYT5 123 aa7.22□□□□□ -1.25
COL9A1-210ENST00000493682 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
COL9A1-210ENST00000493682 A0A1B0GV90 55 aa7.21□□□□□ -1.26
COL9A1-210ENST00000493682 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
COL9A1-210ENST00000493682 ACYP1P07311 99 aa7.18□□□□□ -1.26
COL9A1-210ENST00000493682 F8W1H4 67 aa7.17□□□□□ -1.26
COL9A1-210ENST00000493682 H0Y9P7 68 aa7.16□□□□□ -1.26
COL9A1-210ENST00000493682 ETDBQ3ZM63 59 aa7.16□□□□□ -1.26
COL9A1-210ENST00000493682 ATOX1O00244 68 aa7.15□□□□□ -1.26
COL9A1-210ENST00000493682 UQCRQO14949 82 aa7.15□□□□□ -1.26
COL9A1-210ENST00000493682 SPRR2DP22532 72 aa7.13□□□□□ -1.27
COL9A1-210ENST00000493682 R4GN34 69 aa7.1□□□□□ -1.27
COL9A1-210ENST00000493682 P0C880 135 aa7.07□□□□□ -1.28
COL9A1-210ENST00000493682 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
COL9A1-210ENST00000493682 M0QZ58 72 aa7.03□□□□□ -1.28
COL9A1-210ENST00000493682 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
COL9A1-210ENST00000493682 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
COL9A1-210ENST00000493682 LINC00208Q96KT6 92 aa7.02□□□□□ -1.29
COL9A1-210ENST00000493682 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
COL9A1-210ENST00000493682 LINC01554Q52M75 96 aa6.96□□□□□ -1.3
COL9A1-210ENST00000493682 FAM240AA0A1B0GVK7 77 aa6.95□□□□□ -1.3
COL9A1-210ENST00000493682 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
COL9A1-210ENST00000493682 MP68P56378 58 aa6.91□□□□□ -1.3
COL9A1-210ENST00000493682 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
COL9A1-210ENST00000493682 J3QR89 54 aa6.85□□□□□ -1.31
COL9A1-210ENST00000493682 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
COL9A1-210ENST00000493682 LINC00643Q86TS7 51 aa6.83□□□□□ -1.32
COL9A1-210ENST00000493682 K7ERU9 68 aa6.77□□□□□ -1.33
COL9A1-210ENST00000493682 H3BPC8 53 aa6.76□□□□□ -1.33
COL9A1-210ENST00000493682 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
COL9A1-210ENST00000493682 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
COL9A1-210ENST00000493682 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
COL9A1-210ENST00000493682 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
COL9A1-210ENST00000493682 DSTQ03001 7570 aaKnown RBP6.68□□□□□ -1.34
COL9A1-210ENST00000493682 ACYP2P14621 99 aa6.61□□□□□ -1.35
COL9A1-210ENST00000493682 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
COL9A1-210ENST00000493682 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
COL9A1-210ENST00000493682 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
COL9A1-210ENST00000493682 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
COL9A1-210ENST00000493682 MT1EP04732 61 aa6.5□□□□□ -1.37
COL9A1-210ENST00000493682 PCP4P48539 62 aa6.49□□□□□ -1.37
COL9A1-210ENST00000493682 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
COL9A1-210ENST00000493682 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
COL9A1-210ENST00000493682 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
COL9A1-210ENST00000493682 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
COL9A1-210ENST00000493682 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
COL9A1-210ENST00000493682 MT1GP13640 62 aa6.31□□□□□ -1.4
COL9A1-210ENST00000493682 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
COL9A1-210ENST00000493682 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
COL9A1-210ENST00000493682 A0A0D9SG42 100 aa6.28□□□□□ -1.4
COL9A1-210ENST00000493682 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
COL9A1-210ENST00000493682 MT4P47944 62 aa6.27□□□□□ -1.41
COL9A1-210ENST00000493682 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
COL9A1-210ENST00000493682 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
COL9A1-210ENST00000493682 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
COL9A1-210ENST00000493682 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
COL9A1-210ENST00000493682 MT1MQ8N339 61 aa6.21□□□□□ -1.42
COL9A1-210ENST00000493682 COX7CP15954 63 aa6.19□□□□□ -1.42
COL9A1-210ENST00000493682 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms