RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 NDUFAF8A1L188 74 aa6.93□□□□□ -1.3
PTK7-218ENST00000493339 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
PTK7-218ENST00000493339 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
PTK7-218ENST00000493339 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
PTK7-218ENST00000493339 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
PTK7-218ENST00000493339 RPS29P62273 56 aaKnown RBP6.85□□□□□ -1.31
PTK7-218ENST00000493339 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
PTK7-218ENST00000493339 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
PTK7-218ENST00000493339 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
PTK7-218ENST00000493339 PKHD1P08F94 4074 aa6.8□□□□□ -1.32
PTK7-218ENST00000493339 FAT1Q14517 4588 aa6.79□□□□□ -1.32
PTK7-218ENST00000493339 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
PTK7-218ENST00000493339 S4R3F8 94 aa6.75□□□□□ -1.33
PTK7-218ENST00000493339 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
PTK7-218ENST00000493339 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
PTK7-218ENST00000493339 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
PTK7-218ENST00000493339 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
PTK7-218ENST00000493339 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
PTK7-218ENST00000493339 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
PTK7-218ENST00000493339 LCE2BO14633 110 aa6.63□□□□□ -1.35
PTK7-218ENST00000493339 HSPG2P98160 4391 aa6.62□□□□□ -1.35
PTK7-218ENST00000493339 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
PTK7-218ENST00000493339 APOBP04114 4563 aaKnown RBP6.61□□□□□ -1.35
PTK7-218ENST00000493339 XP32Q5T750 250 aa6.56□□□□□ -1.36
PTK7-218ENST00000493339 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
PTK7-218ENST00000493339 CAMK2N1Q7Z7J9 78 aa6.56□□□□□ -1.36
PTK7-218ENST00000493339 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
PTK7-218ENST00000493339 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
PTK7-218ENST00000493339 M0QZ58 72 aa6.41□□□□□ -1.38
PTK7-218ENST00000493339 LPAP08519 4548 aa6.41□□□□□ -1.38
PTK7-218ENST00000493339 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
PTK7-218ENST00000493339 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
PTK7-218ENST00000493339 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
PTK7-218ENST00000493339 TNXBP22105 4242 aa6.36□□□□□ -1.39
PTK7-218ENST00000493339 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
PTK7-218ENST00000493339 R4GN34 69 aa6.29□□□□□ -1.4
PTK7-218ENST00000493339 LRP2P98164 4655 aa6.28□□□□□ -1.4
PTK7-218ENST00000493339 RYR2Q92736 4967 aa6.26□□□□□ -1.41
PTK7-218ENST00000493339 KRTAP21-3Q3LHN1 58 aa6.25□□□□□ -1.41
PTK7-218ENST00000493339 RYR1P21817 5038 aa6.21□□□□□ -1.41
PTK7-218ENST00000493339 Q5VSD8 79 aa6.17□□□□□ -1.42
PTK7-218ENST00000493339 RYR3Q15413 4870 aa6.14□□□□□ -1.43
PTK7-218ENST00000493339 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
PTK7-218ENST00000493339 MUC2Q02817 5179 aa6.08□□□□□ -1.44
PTK7-218ENST00000493339 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
PTK7-218ENST00000493339 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
PTK7-218ENST00000493339 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
PTK7-218ENST00000493339 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
PTK7-218ENST00000493339 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
PTK7-218ENST00000493339 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
PTK7-218ENST00000493339 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
PTK7-218ENST00000493339 TNP1P09430 55 aa5.79□□□□□ -1.48
PTK7-218ENST00000493339 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
PTK7-218ENST00000493339 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
PTK7-218ENST00000493339 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.49
PTK7-218ENST00000493339 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
PTK7-218ENST00000493339 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
PTK7-218ENST00000493339 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
PTK7-218ENST00000493339 HERC2O95714 4834 aa5.61□□□□□ -1.51
PTK7-218ENST00000493339 HERC1Q15751 4861 aa5.58□□□□□ -1.52
PTK7-218ENST00000493339 FLGP20930 4061 aaPredicted RBP5.52□□□□□ -1.53
PTK7-218ENST00000493339 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
PTK7-218ENST00000493339 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
PTK7-218ENST00000493339 HMCN2Q8NDA2 5059 aa5.41□□□□□ -1.54
PTK7-218ENST00000493339 INE1O15225 51 aa5.38□□□□□ -1.55
PTK7-218ENST00000493339 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
PTK7-218ENST00000493339 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
PTK7-218ENST00000493339 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
PTK7-218ENST00000493339 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
PTK7-218ENST00000493339 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
PTK7-218ENST00000493339 M0R2T5 61 aa5.22□□□□□ -1.57
PTK7-218ENST00000493339 USH2AO75445 5202 aa5.17□□□□□ -1.58
PTK7-218ENST00000493339 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
PTK7-218ENST00000493339 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
PTK7-218ENST00000493339 KMT2DO14686 5537 aa5.12□□□□□ -1.59
PTK7-218ENST00000493339 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
PTK7-218ENST00000493339 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
PTK7-218ENST00000493339 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
PTK7-218ENST00000493339 MT1FP04733 61 aa5.09□□□□□ -1.6
PTK7-218ENST00000493339 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
PTK7-218ENST00000493339 MT2AP02795 61 aa5.04□□□□□ -1.6
PTK7-218ENST00000493339 MT1XP80297 61 aa5.04□□□□□ -1.6
PTK7-218ENST00000493339 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
PTK7-218ENST00000493339 MT1HP80294 61 aa5□□□□□ -1.61
PTK7-218ENST00000493339 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
PTK7-218ENST00000493339 MT1BP07438 61 aa4.97□□□□□ -1.61
PTK7-218ENST00000493339 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.61
PTK7-218ENST00000493339 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
PTK7-218ENST00000493339 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
PTK7-218ENST00000493339 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
PTK7-218ENST00000493339 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
PTK7-218ENST00000493339 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
PTK7-218ENST00000493339 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
PTK7-218ENST00000493339 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
PTK7-218ENST00000493339 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
PTK7-218ENST00000493339 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
PTK7-218ENST00000493339 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
PTK7-218ENST00000493339 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
PTK7-218ENST00000493339 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
PTK7-218ENST00000493339 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms