RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	SCRIB	Q14160	1630 aa		-0.56	□□□□□ -2.5
GCFC2-210	ENST00000492826	DEFB1	P60022	68 aa		-0.57	□□□□□ -2.5
GCFC2-210	ENST00000492826	HILPDA	Q9Y5L2	63 aa		-0.57	□□□□□ -2.5
GCFC2-210	ENST00000492826	HFM1	A2PYH4	1435 aa		-0.57	□□□□□ -2.5
GCFC2-210	ENST00000492826	DNMBP	Q6XZF7	1577 aa		-0.57	□□□□□ -2.5
GCFC2-210	ENST00000492826	SFTA3	P0C7M3	94 aa		-0.58	□□□□□ -2.5
GCFC2-210	ENST00000492826	MT1L	Q93083	61 aa		-0.58	□□□□□ -2.5
GCFC2-210	ENST00000492826	UBL5	Q9BZL1	73 aa		-0.58	□□□□□ -2.5
GCFC2-210	ENST00000492826	TIAM1	Q13009	1591 aa		-0.58	□□□□□ -2.5
GCFC2-210	ENST00000492826	CFAP46	Q8IYW2	2715 aa		-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826	MMP24-AS1	A0A0U1RRL7	71 aa		-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826		H3BVH4	76 aa		-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826	DEFB114	Q30KQ6	69 aa		-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826	MINOS1	Q5TGZ0	78 aa		-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826	SPTAN1	Q13813	2472 aa	Known RBP	-0.59	□□□□□ -2.5
GCFC2-210	ENST00000492826	TNP1	P09430	55 aa		-0.6	□□□□□ -2.51
GCFC2-210	ENST00000492826	C6orf48	Q9UBA6	75 aa		-0.6	□□□□□ -2.51
GCFC2-210	ENST00000492826	LMO7	Q8WWI1	1683 aa		-0.6	□□□□□ -2.51
GCFC2-210	ENST00000492826	MYO9A	B2RTY4	2548 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	CEP295	Q9C0D2	2601 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	VPS13C	Q709C8	3753 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	MRPL33	O75394	65 aa	Known RBP	-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	DMXL2	Q8TDJ6	3036 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	CCDC180	Q9P1Z9	1646 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	CRYBG3	Q68DQ2	2970 aa		-0.61	□□□□□ -2.51
GCFC2-210	ENST00000492826	MROH2A	A6NES4	1674 aa		-0.62	□□□□□ -2.51
GCFC2-210	ENST00000492826	DUOX2	Q9NRD8	1548 aa		-0.62	□□□□□ -2.51
GCFC2-210	ENST00000492826		K7EMI3	77 aa		-0.62	□□□□□ -2.51
GCFC2-210	ENST00000492826	MT1G	P13640	62 aa		-0.62	□□□□□ -2.51
GCFC2-210	ENST00000492826	DOPEY1	Q5JWR5	2465 aa		-0.62	□□□□□ -2.51
GCFC2-210	ENST00000492826	KIF21B	O75037	1637 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	MYO15A	Q9UKN7	3530 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	LINC01549	A6NIU2	74 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	FCER1G	P30273	86 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	ATXN8	Q156A1	80 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	CLPSL2	Q6UWE3	100 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	CSMD2	Q7Z408	3487 aa		-0.63	□□□□□ -2.51
GCFC2-210	ENST00000492826	ABCA13	Q86UQ4	5058 aa		-0.64	□□□□□ -2.51
GCFC2-210	ENST00000492826	IGIP	A6NJ69	53 aa		-0.64	□□□□□ -2.51
GCFC2-210	ENST00000492826	ATM	Q13315	3056 aa		-0.64	□□□□□ -2.51
GCFC2-210	ENST00000492826	EFCAB5	A4FU69	1503 aa		-0.64	□□□□□ -2.51
GCFC2-210	ENST00000492826	AGL	P35573	1532 aa		-0.65	□□□□□ -2.51
GCFC2-210	ENST00000492826	CFAP54	Q96N23	3096 aa		-0.66	□□□□□ -2.51
GCFC2-210	ENST00000492826	DDX60	Q8IY21	1712 aa	Known RBP	-0.66	□□□□□ -2.51
GCFC2-210	ENST00000492826		H3BUA1	57 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826		M0R1W7	72 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826	SMCO4	Q9NRQ5	59 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826	IQGAP1	P46940	1657 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826	PRUNE2	Q8WUY3	3088 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826	UGGT1	Q9NYU2	1555 aa		-0.66	□□□□□ -2.52
GCFC2-210	ENST00000492826		M0QZ58	72 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	PDCD5	O14737	125 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	MT1HL1	P0DM35	61 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	MT1M	Q8N339	61 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	LINC00308	Q8TCZ7	52 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	NOP10	Q9NPE3	64 aa	Known RBP	-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	EEA1	Q15075	1411 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	ITPR2	Q14571	2701 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	PREX2	Q70Z35	1606 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	NRXN3	Q9Y4C0	1643 aa		-0.67	□□□□□ -2.52
GCFC2-210	ENST00000492826	EFCAB6	Q5THR3	1501 aa		-0.68	□□□□□ -2.52
GCFC2-210	ENST00000492826		M0QY20	66 aa		-0.68	□□□□□ -2.52
GCFC2-210	ENST00000492826	MT2A	P02795	61 aa		-0.68	□□□□□ -2.52
GCFC2-210	ENST00000492826	KAAG1	Q9UBP8	84 aa		-0.68	□□□□□ -2.52
GCFC2-210	ENST00000492826	TLN1	Q9Y490	2541 aa	Known RBP	-0.68	□□□□□ -2.52
GCFC2-210	ENST00000492826		A8MTW9	85 aa		-0.69	□□□□□ -2.52
GCFC2-210	ENST00000492826	FREM2	Q5SZK8	3169 aa		-0.7	□□□□□ -2.52
GCFC2-210	ENST00000492826	FRYL	O94915	3013 aa		-0.7	□□□□□ -2.52
GCFC2-210	ENST00000492826	GNG13	Q9P2W3	67 aa		-0.7	□□□□□ -2.52
GCFC2-210	ENST00000492826	NFAT5	O94916	1531 aa		-0.7	□□□□□ -2.52
GCFC2-210	ENST00000492826	ABCA10	Q8WWZ4	1543 aa		-0.7	□□□□□ -2.52
GCFC2-210	ENST00000492826	DMD	P11532	3685 aa		-0.71	□□□□□ -2.52
GCFC2-210	ENST00000492826	SYCP2	Q9BX26	1530 aa		-0.71	□□□□□ -2.52
GCFC2-210	ENST00000492826		A0A087WWC5	75 aa		-0.72	□□□□□ -2.52
GCFC2-210	ENST00000492826	ABCA5	Q8WWZ7	1642 aa		-0.73	□□□□□ -2.53
GCFC2-210	ENST00000492826	MT1B	P07438	61 aa		-0.73	□□□□□ -2.53
GCFC2-210	ENST00000492826	WFDC10B	Q8IUB3	73 aa		-0.73	□□□□□ -2.53
GCFC2-210	ENST00000492826	WDFY3	Q8IZQ1	3526 aa		-0.73	□□□□□ -2.53
GCFC2-210	ENST00000492826	CPS1	P31327	1500 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	CEP350	Q5VT06	3117 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	SMIM27	A0A1W2PRY6	76 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	LINC01546	A6NGU7	62 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	DEFB4A	O15263	64 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	TFF3	Q07654	80 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	TMEM167B	Q9NRX6	74 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	PCNT	O95613	3336 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	PRX	Q9BXM0	1461 aa		-0.74	□□□□□ -2.53
GCFC2-210	ENST00000492826	NMES1	Q9C002	83 aa		-0.75	□□□□□ -2.53
GCFC2-210	ENST00000492826	SZT2	Q5T011	3432 aa		-0.75	□□□□□ -2.53
GCFC2-210	ENST00000492826	DNAH12	Q6ZR08	3092 aa		-0.76	□□□□□ -2.53
GCFC2-210	ENST00000492826	SPART-AS1	P0CW21	52 aa		-0.76	□□□□□ -2.53
GCFC2-210	ENST00000492826	CLTCL1	P53675	1640 aa		-0.76	□□□□□ -2.53
GCFC2-210	ENST00000492826	ADCY10	Q96PN6	1610 aa		-0.77	□□□□□ -2.53
GCFC2-210	ENST00000492826		H0YGX0	51 aa		-0.77	□□□□□ -2.53
GCFC2-210	ENST00000492826	POLR2K	P53803	58 aa	Known RBP	-0.77	□□□□□ -2.53
GCFC2-210	ENST00000492826	LEAP2	Q969E1	77 aa		-0.77	□□□□□ -2.53
GCFC2-210	ENST00000492826	WDFY4	Q6ZS81	3184 aa		-0.78	□□□□□ -2.53
GCFC2-210	ENST00000492826	ABRACL	Q9P1F3	81 aa		-0.78	□□□□□ -2.53
GCFC2-210	ENST00000492826	MUC3A	Q02505	3323 aa		-0.78	□□□□□ -2.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms