RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
RGPD6-211ENST00000490990 SYNE2Q8WXH0 6885 aaKnown RBP9.4□□□□□ -0.9
RGPD6-211ENST00000490990 OCR1Q9BZK8 76 aa9.39□□□□□ -0.91
RGPD6-211ENST00000490990 MT1BP07438 61 aa9.37□□□□□ -0.91
RGPD6-211ENST00000490990 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
RGPD6-211ENST00000490990 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
RGPD6-211ENST00000490990 Q5VV11 94 aa9.34□□□□□ -0.91
RGPD6-211ENST00000490990 J3QR89 54 aa9.33□□□□□ -0.92
RGPD6-211ENST00000490990 A8MUN3 132 aa9.32□□□□□ -0.92
RGPD6-211ENST00000490990 MP68P56378 58 aa9.32□□□□□ -0.92
RGPD6-211ENST00000490990 NDUFC1O43677 76 aa9.31□□□□□ -0.92
RGPD6-211ENST00000490990 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
RGPD6-211ENST00000490990 CRIPTQ9P021 101 aa9.27□□□□□ -0.93
RGPD6-211ENST00000490990 H0YAA0 97 aa9.25□□□□□ -0.93
RGPD6-211ENST00000490990 A6NN06 94 aa9.22□□□□□ -0.93
RGPD6-211ENST00000490990 H3BPC8 53 aa9.21□□□□□ -0.94
RGPD6-211ENST00000490990 SCGB1A1P11684 91 aa9.16□□□□□ -0.94
RGPD6-211ENST00000490990 KRTAP6-3Q3LI67 103 aa9.15□□□□□ -0.94
RGPD6-211ENST00000490990 KRTAP10-5P60370 271 aa9.14□□□□□ -0.95
RGPD6-211ENST00000490990 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
RGPD6-211ENST00000490990 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
RGPD6-211ENST00000490990 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
RGPD6-211ENST00000490990 K7ERU9 68 aa8.99□□□□□ -0.97
RGPD6-211ENST00000490990 P0C880 135 aa8.94□□□□□ -0.98
RGPD6-211ENST00000490990 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
RGPD6-211ENST00000490990 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
RGPD6-211ENST00000490990 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
RGPD6-211ENST00000490990 R4GN34 69 aa8.89□□□□□ -0.99
RGPD6-211ENST00000490990 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
RGPD6-211ENST00000490990 ACYP2P14621 99 aa8.85□□□□□ -0.99
RGPD6-211ENST00000490990 MUC12Q9UKN1 5478 aa8.84□□□□□ -0.99
RGPD6-211ENST00000490990 M0QZ58 72 aa8.83□□□□□ -1
RGPD6-211ENST00000490990 NEBP20929 6669 aa8.83□□□□□ -1
RGPD6-211ENST00000490990 PLAC4Q8WY50 150 aa8.81□□□□□ -1
RGPD6-211ENST00000490990 MT1XP80297 61 aa8.8□□□□□ -1
RGPD6-211ENST00000490990 PRO2289Q9P1D8 64 aa8.79□□□□□ -1
RGPD6-211ENST00000490990 KRTAP5-9P26371 169 aa8.77□□□□□ -1.01
RGPD6-211ENST00000490990 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
RGPD6-211ENST00000490990 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
RGPD6-211ENST00000490990 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
RGPD6-211ENST00000490990 KMT2DO14686 5537 aa8.68□□□□□ -1.02
RGPD6-211ENST00000490990 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
RGPD6-211ENST00000490990 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
RGPD6-211ENST00000490990 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
RGPD6-211ENST00000490990 MDN1Q9NU22 5596 aa8.61□□□□□ -1.03
RGPD6-211ENST00000490990 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
RGPD6-211ENST00000490990 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
RGPD6-211ENST00000490990 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
RGPD6-211ENST00000490990 KRTAP20-1Q3LI63 56 aa8.43□□□□□ -1.06
RGPD6-211ENST00000490990 COA5Q86WW8 74 aa8.4□□□□□ -1.06
RGPD6-211ENST00000490990 KRTAP4-8A0A0G2JLE6 195 aa8.39□□□□□ -1.07
RGPD6-211ENST00000490990 KRTAP10-7P60409 375 aaPredicted RBP8.39□□□□□ -1.07
RGPD6-211ENST00000490990 KRTAP4-8Q9BYQ9 185 aa8.39□□□□□ -1.07
RGPD6-211ENST00000490990 COX7CP15954 63 aa8.38□□□□□ -1.07
RGPD6-211ENST00000490990 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
RGPD6-211ENST00000490990 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
RGPD6-211ENST00000490990 SPRR2EP22531 72 aa8.35□□□□□ -1.07
RGPD6-211ENST00000490990 SPRR2BP35325 72 aa8.35□□□□□ -1.07
RGPD6-211ENST00000490990 SPRR2AP35326 72 aa8.35□□□□□ -1.07
RGPD6-211ENST00000490990 H7BZZ5 65 aa8.27□□□□□ -1.09
RGPD6-211ENST00000490990 LCE1AQ5T7P2 110 aa8.27□□□□□ -1.09
RGPD6-211ENST00000490990 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
RGPD6-211ENST00000490990 KRTAP2-3P0C7H8 128 aa8.24□□□□□ -1.09
RGPD6-211ENST00000490990 KRTAP2-4Q9BYR9 128 aa8.24□□□□□ -1.09
RGPD6-211ENST00000490990 SEC61GP60059 68 aa8.21□□□□□ -1.1
RGPD6-211ENST00000490990 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
RGPD6-211ENST00000490990 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
RGPD6-211ENST00000490990 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
RGPD6-211ENST00000490990 A0A0D9SG42 100 aa8.09□□□□□ -1.11
RGPD6-211ENST00000490990 A0A1B0GU33 70 aa8.09□□□□□ -1.11
RGPD6-211ENST00000490990 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
RGPD6-211ENST00000490990 SPRR2DP22532 72 aa8.07□□□□□ -1.12
RGPD6-211ENST00000490990 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
RGPD6-211ENST00000490990 KRTAP2-2Q9BYT5 123 aa7.98□□□□□ -1.13
RGPD6-211ENST00000490990 KRTAP2-1Q9BYU5 128 aa7.98□□□□□ -1.13
RGPD6-211ENST00000490990 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
RGPD6-211ENST00000490990 A0A1B0GU69 56 aa7.95□□□□□ -1.14
RGPD6-211ENST00000490990 CCDC179H3BU77 68 aa7.94□□□□□ -1.14
RGPD6-211ENST00000490990 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
RGPD6-211ENST00000490990 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
RGPD6-211ENST00000490990 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
RGPD6-211ENST00000490990 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
RGPD6-211ENST00000490990 A8MU10 97 aa7.8□□□□□ -1.16
RGPD6-211ENST00000490990 MT1EP04732 61 aa7.79□□□□□ -1.16
RGPD6-211ENST00000490990 LCE5AQ5TCM9 118 aa7.74□□□□□ -1.17
RGPD6-211ENST00000490990 KRTAP19-3Q7Z4W3 81 aa7.71□□□□□ -1.18
RGPD6-211ENST00000490990 PRR15LQ9BU68 103 aa7.71□□□□□ -1.18
RGPD6-211ENST00000490990 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
RGPD6-211ENST00000490990 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
RGPD6-211ENST00000490990 TMEM258P61165 79 aa7.64□□□□□ -1.19
RGPD6-211ENST00000490990 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
RGPD6-211ENST00000490990 DSTQ03001 7570 aaKnown RBP7.58□□□□□ -1.2
RGPD6-211ENST00000490990 TNP1P09430 55 aa7.55□□□□□ -1.2
RGPD6-211ENST00000490990 MT1GP13640 62 aa7.53□□□□□ -1.2
RGPD6-211ENST00000490990 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
RGPD6-211ENST00000490990 UQCR11O14957 56 aa7.47□□□□□ -1.21
RGPD6-211ENST00000490990 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
RGPD6-211ENST00000490990 MT1LQ93083 61 aa7.45□□□□□ -1.22
RGPD6-211ENST00000490990 MT1MQ8N339 61 aa7.41□□□□□ -1.22
RGPD6-211ENST00000490990 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms