RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
SREBF1-216ENST00000490796 A0A087WVE0 104 aa8.62□□□□□ -1.03
SREBF1-216ENST00000490796 NDUFC1O43677 76 aa8.59□□□□□ -1.03
SREBF1-216ENST00000490796 KRTAP20-1Q3LI63 56 aa8.56□□□□□ -1.04
SREBF1-216ENST00000490796 ATOX1O00244 68 aa8.53□□□□□ -1.04
SREBF1-216ENST00000490796 UQCRQO14949 82 aa8.53□□□□□ -1.04
SREBF1-216ENST00000490796 KRTAP5-9P26371 169 aa8.53□□□□□ -1.04
SREBF1-216ENST00000490796 H0Y9P7 68 aa8.52□□□□□ -1.05
SREBF1-216ENST00000490796 KMT2DO14686 5537 aa8.52□□□□□ -1.05
SREBF1-216ENST00000490796 ACYP1P07311 99 aa8.52□□□□□ -1.05
SREBF1-216ENST00000490796 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.05
SREBF1-216ENST00000490796 MDN1Q9NU22 5596 aa8.51□□□□□ -1.05
SREBF1-216ENST00000490796 H0YAA0 97 aa8.5□□□□□ -1.05
SREBF1-216ENST00000490796 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
SREBF1-216ENST00000490796 A8MUN3 132 aa8.45□□□□□ -1.06
SREBF1-216ENST00000490796 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
SREBF1-216ENST00000490796 PCP4L1A6NKN8 68 aa8.43□□□□□ -1.06
SREBF1-216ENST00000490796 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
SREBF1-216ENST00000490796 FAM240AA0A1B0GVK7 77 aa8.41□□□□□ -1.06
SREBF1-216ENST00000490796 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
SREBF1-216ENST00000490796 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
SREBF1-216ENST00000490796 MP68P56378 58 aa8.32□□□□□ -1.08
SREBF1-216ENST00000490796 SPRR2FQ96RM1 72 aa8.31□□□□□ -1.08
SREBF1-216ENST00000490796 R4GN34 69 aa8.29□□□□□ -1.08
SREBF1-216ENST00000490796 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
SREBF1-216ENST00000490796 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
SREBF1-216ENST00000490796 KRTAP2-3P0C7H8 128 aa8.27□□□□□ -1.09
SREBF1-216ENST00000490796 KRTAP2-4Q9BYR9 128 aa8.27□□□□□ -1.09
SREBF1-216ENST00000490796 MT1XP80297 61 aa8.26□□□□□ -1.09
SREBF1-216ENST00000490796 SPRR2EP22531 72 aa8.24□□□□□ -1.09
SREBF1-216ENST00000490796 SPRR2BP35325 72 aa8.24□□□□□ -1.09
SREBF1-216ENST00000490796 SPRR2AP35326 72 aa8.24□□□□□ -1.09
SREBF1-216ENST00000490796 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
SREBF1-216ENST00000490796 M0QZ58 72 aa8.2□□□□□ -1.1
SREBF1-216ENST00000490796 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
SREBF1-216ENST00000490796 P0C880 135 aa8.18□□□□□ -1.1
SREBF1-216ENST00000490796 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
SREBF1-216ENST00000490796 H3BPC8 53 aa8.12□□□□□ -1.11
SREBF1-216ENST00000490796 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
SREBF1-216ENST00000490796 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
SREBF1-216ENST00000490796 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
SREBF1-216ENST00000490796 LCE1AQ5T7P2 110 aa8.04□□□□□ -1.12
SREBF1-216ENST00000490796 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
SREBF1-216ENST00000490796 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
SREBF1-216ENST00000490796 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
SREBF1-216ENST00000490796 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
SREBF1-216ENST00000490796 SPRR2DP22532 72 aa7.98□□□□□ -1.13
SREBF1-216ENST00000490796 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
SREBF1-216ENST00000490796 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
SREBF1-216ENST00000490796 J3QR89 54 aa7.95□□□□□ -1.14
SREBF1-216ENST00000490796 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
SREBF1-216ENST00000490796 ACYP2P14621 99 aa7.91□□□□□ -1.14
SREBF1-216ENST00000490796 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
SREBF1-216ENST00000490796 A0A1B0GV90 55 aa7.89□□□□□ -1.15
SREBF1-216ENST00000490796 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
SREBF1-216ENST00000490796 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
SREBF1-216ENST00000490796 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
SREBF1-216ENST00000490796 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
SREBF1-216ENST00000490796 SMIM20Q8N5G0 67 aa7.74□□□□□ -1.17
SREBF1-216ENST00000490796 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
SREBF1-216ENST00000490796 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
SREBF1-216ENST00000490796 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
SREBF1-216ENST00000490796 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
SREBF1-216ENST00000490796 K7ERU9 68 aa7.5□□□□□ -1.21
SREBF1-216ENST00000490796 SEC61GP60059 68 aa7.4□□□□□ -1.22
SREBF1-216ENST00000490796 DSTQ03001 7570 aaKnown RBP7.38□□□□□ -1.23
SREBF1-216ENST00000490796 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
SREBF1-216ENST00000490796 A0A0D9SG42 100 aa7.37□□□□□ -1.23
SREBF1-216ENST00000490796 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
SREBF1-216ENST00000490796 LCE5AQ5TCM9 118 aa7.37□□□□□ -1.23
SREBF1-216ENST00000490796 GPR98Q8WXG9 6306 aa7.35□□□□□ -1.23
SREBF1-216ENST00000490796 MT1EP04732 61 aa7.35□□□□□ -1.23
SREBF1-216ENST00000490796 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
SREBF1-216ENST00000490796 SERP2Q8N6R1 65 aa7.35□□□□□ -1.23
SREBF1-216ENST00000490796 COA5Q86WW8 74 aa7.33□□□□□ -1.24
SREBF1-216ENST00000490796 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
SREBF1-216ENST00000490796 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SREBF1-216ENST00000490796 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
SREBF1-216ENST00000490796 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
SREBF1-216ENST00000490796 A0A1B0GU33 70 aa7.22□□□□□ -1.25
SREBF1-216ENST00000490796 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
SREBF1-216ENST00000490796 MT1GP13640 62 aa7.17□□□□□ -1.26
SREBF1-216ENST00000490796 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
SREBF1-216ENST00000490796 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
SREBF1-216ENST00000490796 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
SREBF1-216ENST00000490796 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
SREBF1-216ENST00000490796 COX7CP15954 63 aa7.05□□□□□ -1.28
SREBF1-216ENST00000490796 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
SREBF1-216ENST00000490796 MT1MQ8N339 61 aa7.02□□□□□ -1.29
SREBF1-216ENST00000490796 A0A1B0GU69 56 aa7.01□□□□□ -1.29
SREBF1-216ENST00000490796 MT4P47944 62 aa7□□□□□ -1.29
SREBF1-216ENST00000490796 MT1LQ93083 61 aa6.99□□□□□ -1.29
SREBF1-216ENST00000490796 HMCN1Q96RW7 5635 aa6.98□□□□□ -1.29
SREBF1-216ENST00000490796 H7BZZ5 65 aa6.96□□□□□ -1.3
SREBF1-216ENST00000490796 TNP1P09430 55 aa6.94□□□□□ -1.3
SREBF1-216ENST00000490796 A8MU10 97 aa6.93□□□□□ -1.3
SREBF1-216ENST00000490796 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
SREBF1-216ENST00000490796 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
SREBF1-216ENST00000490796 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
SREBF1-216ENST00000490796 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms