RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
PCSK9-202ENST00000490692 FAT1Q14517 4588 aa5.98□□□□□ -1.45
PCSK9-202ENST00000490692 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
PCSK9-202ENST00000490692 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
PCSK9-202ENST00000490692 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
PCSK9-202ENST00000490692 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
PCSK9-202ENST00000490692 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
PCSK9-202ENST00000490692 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
PCSK9-202ENST00000490692 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
PCSK9-202ENST00000490692 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
PCSK9-202ENST00000490692 SACSQ9NZJ4 4579 aa5.86□□□□□ -1.47
PCSK9-202ENST00000490692 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
PCSK9-202ENST00000490692 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
PCSK9-202ENST00000490692 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
PCSK9-202ENST00000490692 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
PCSK9-202ENST00000490692 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
PCSK9-202ENST00000490692 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
PCSK9-202ENST00000490692 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
PCSK9-202ENST00000490692 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
PCSK9-202ENST00000490692 RYR3Q15413 4870 aa5.77□□□□□ -1.49
PCSK9-202ENST00000490692 MYCBP2O75592 4640 aa5.74□□□□□ -1.49
PCSK9-202ENST00000490692 PKD1P98161 4303 aa5.74□□□□□ -1.49
PCSK9-202ENST00000490692 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
PCSK9-202ENST00000490692 XP32Q5T750 250 aa5.72□□□□□ -1.49
PCSK9-202ENST00000490692 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.49
PCSK9-202ENST00000490692 A0A1B0GVY2 172 aa5.71□□□□□ -1.5
PCSK9-202ENST00000490692 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
PCSK9-202ENST00000490692 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
PCSK9-202ENST00000490692 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
PCSK9-202ENST00000490692 RYR2Q92736 4967 aa5.69□□□□□ -1.5
PCSK9-202ENST00000490692 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
PCSK9-202ENST00000490692 RYR1P21817 5038 aa5.65□□□□□ -1.51
PCSK9-202ENST00000490692 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
PCSK9-202ENST00000490692 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
PCSK9-202ENST00000490692 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.52
PCSK9-202ENST00000490692 M0R2T5 61 aa5.51□□□□□ -1.53
PCSK9-202ENST00000490692 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
PCSK9-202ENST00000490692 TNP1P09430 55 aa5.47□□□□□ -1.53
PCSK9-202ENST00000490692 HSPG2P98160 4391 aa5.46□□□□□ -1.54
PCSK9-202ENST00000490692 PKHD1L1Q86WI1 4243 aa5.38□□□□□ -1.55
PCSK9-202ENST00000490692 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
PCSK9-202ENST00000490692 LRP2P98164 4655 aa5.38□□□□□ -1.55
PCSK9-202ENST00000490692 LPAP08519 4548 aa5.37□□□□□ -1.55
PCSK9-202ENST00000490692 HERC2O95714 4834 aa5.37□□□□□ -1.55
PCSK9-202ENST00000490692 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
PCSK9-202ENST00000490692 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
PCSK9-202ENST00000490692 MUC2Q02817 5179 aa5.32□□□□□ -1.56
PCSK9-202ENST00000490692 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
PCSK9-202ENST00000490692 HERC1Q15751 4861 aa5.28□□□□□ -1.56
PCSK9-202ENST00000490692 TNXBP22105 4242 aa5.26□□□□□ -1.57
PCSK9-202ENST00000490692 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
PCSK9-202ENST00000490692 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
PCSK9-202ENST00000490692 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
PCSK9-202ENST00000490692 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
PCSK9-202ENST00000490692 INE1O15225 51 aa5.08□□□□□ -1.6
PCSK9-202ENST00000490692 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
PCSK9-202ENST00000490692 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
PCSK9-202ENST00000490692 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
PCSK9-202ENST00000490692 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
PCSK9-202ENST00000490692 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
PCSK9-202ENST00000490692 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
PCSK9-202ENST00000490692 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
PCSK9-202ENST00000490692 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
PCSK9-202ENST00000490692 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
PCSK9-202ENST00000490692 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
PCSK9-202ENST00000490692 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
PCSK9-202ENST00000490692 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.67
PCSK9-202ENST00000490692 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
PCSK9-202ENST00000490692 USH2AO75445 5202 aa4.57□□□□□ -1.68
PCSK9-202ENST00000490692 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
PCSK9-202ENST00000490692 MT1HP80294 61 aa4.5□□□□□ -1.69
PCSK9-202ENST00000490692 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
PCSK9-202ENST00000490692 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
PCSK9-202ENST00000490692 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
PCSK9-202ENST00000490692 MT1FP04733 61 aa4.42□□□□□ -1.7
PCSK9-202ENST00000490692 MT2AP02795 61 aa4.4□□□□□ -1.7
PCSK9-202ENST00000490692 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
PCSK9-202ENST00000490692 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
PCSK9-202ENST00000490692 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PCSK9-202ENST00000490692 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
PCSK9-202ENST00000490692 KMT2DO14686 5537 aa4.28□□□□□ -1.72
PCSK9-202ENST00000490692 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
PCSK9-202ENST00000490692 MT1XP80297 61 aa4.24□□□□□ -1.73
PCSK9-202ENST00000490692 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
PCSK9-202ENST00000490692 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
PCSK9-202ENST00000490692 MT1BP07438 61 aa4.18□□□□□ -1.74
PCSK9-202ENST00000490692 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
PCSK9-202ENST00000490692 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
PCSK9-202ENST00000490692 LCE2BO14633 110 aa4.1□□□□□ -1.75
PCSK9-202ENST00000490692 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
PCSK9-202ENST00000490692 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
PCSK9-202ENST00000490692 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
PCSK9-202ENST00000490692 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
PCSK9-202ENST00000490692 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
PCSK9-202ENST00000490692 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
PCSK9-202ENST00000490692 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
PCSK9-202ENST00000490692 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
PCSK9-202ENST00000490692 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
PCSK9-202ENST00000490692 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
PCSK9-202ENST00000490692 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms