RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 FRYQ5TBA9 3013 aa0.34□□□□□ -2.36
LINC02049-201ENST00000490647 FAT3Q8TDW7 4589 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 HIVEP1P15822 2718 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 TGP01266 2768 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 MT1AP04731 61 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 VPS13DQ5THJ4 4388 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 MYO18BQ8IUG5 2567 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 CRYBG3Q68DQ2 2970 aa0.33□□□□□ -2.36
LINC02049-201ENST00000490647 TRIOO75962 3097 aa0.32□□□□□ -2.36
LINC02049-201ENST00000490647 WDR87Q6ZQQ6 2873 aa0.31□□□□□ -2.36
LINC02049-201ENST00000490647 CELSR3Q9NYQ7 3312 aa0.31□□□□□ -2.36
LINC02049-201ENST00000490647 SPRR2EP22531 72 aa0.31□□□□□ -2.36
LINC02049-201ENST00000490647 LRP2P98164 4655 aa0.31□□□□□ -2.36
LINC02049-201ENST00000490647 USP9YO00507 2555 aaPredicted RBP0.3□□□□□ -2.36
LINC02049-201ENST00000490647 SPTBN5Q9NRC6 3674 aaKnown RBP0.3□□□□□ -2.36
LINC02049-201ENST00000490647 DNAH7Q8WXX0 4024 aa0.3□□□□□ -2.36
LINC02049-201ENST00000490647 LAMA5O15230 3695 aa0.29□□□□□ -2.36
LINC02049-201ENST00000490647 NBEAL1Q6ZS30 2694 aa0.29□□□□□ -2.36
LINC02049-201ENST00000490647 NBPF19A0A087WUL8 3843 aa0.29□□□□□ -2.36
LINC02049-201ENST00000490647 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
LINC02049-201ENST00000490647 LAMA1P25391 3075 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 TLN2Q9Y4G6 2542 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 DNAH8Q96JB1 4490 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 KRTAP8-1Q8IUC2 63 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 ARHGAP5-AS1Q96IT6 56 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 KMT2DO14686 5537 aa0.27□□□□□ -2.37
LINC02049-201ENST00000490647 MXRA5Q9NR99 2828 aa0.26□□□□□ -2.37
LINC02049-201ENST00000490647 DNAH1Q9P2D7 4330 aa0.26□□□□□ -2.37
LINC02049-201ENST00000490647 ZFHX4Q86UP3 3567 aa0.25□□□□□ -2.37
LINC02049-201ENST00000490647 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
LINC02049-201ENST00000490647 MGAM2Q2M2H8 2515 aa0.25□□□□□ -2.37
LINC02049-201ENST00000490647 ITPR3Q14573 2671 aa0.24□□□□□ -2.37
LINC02049-201ENST00000490647 DEFB104AQ8WTQ1 72 aa0.24□□□□□ -2.37
LINC02049-201ENST00000490647 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
LINC02049-201ENST00000490647 FAT1Q14517 4588 aa0.24□□□□□ -2.37
LINC02049-201ENST00000490647 USP9XQ93008 2570 aaPredicted RBP0.23□□□□□ -2.37
LINC02049-201ENST00000490647 SMR3BP02814 79 aaPredicted RBP0.21□□□□□ -2.38
LINC02049-201ENST00000490647 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
LINC02049-201ENST00000490647 ITPR1Q14643 2758 aa0.19□□□□□ -2.38
LINC02049-201ENST00000490647 LINC01590Q5TEZ4 76 aa0.18□□□□□ -2.38
LINC02049-201ENST00000490647 TTTY10Q9BZA0 68 aa0.18□□□□□ -2.38
LINC02049-201ENST00000490647 DNAH10Q8IVF4 4471 aa0.16□□□□□ -2.38
LINC02049-201ENST00000490647 DEFB1P60022 68 aa0.16□□□□□ -2.38
LINC02049-201ENST00000490647 ADGRG4Q8IZF6 3080 aa0.15□□□□□ -2.38
LINC02049-201ENST00000490647 MGAQ8IWI9 3026 aa0.15□□□□□ -2.39
LINC02049-201ENST00000490647 CSMD1Q96PZ7 3565 aa0.14□□□□□ -2.39
LINC02049-201ENST00000490647 RELNP78509 3460 aa0.14□□□□□ -2.39
LINC02049-201ENST00000490647 HERC1Q15751 4861 aa0.12□□□□□ -2.39
LINC02049-201ENST00000490647 C5orf42Q9H799 3197 aa0.12□□□□□ -2.39
LINC02049-201ENST00000490647 SPTAN1Q13813 2472 aaKnown RBP0.11□□□□□ -2.39
LINC02049-201ENST00000490647 CMYA5Q8N3K9 4069 aa0.11□□□□□ -2.39
LINC02049-201ENST00000490647 PRCDQ00LT1 54 aa0.11□□□□□ -2.39
LINC02049-201ENST00000490647 PLECQ15149 4684 aaKnown RBP0.1□□□□□ -2.39
LINC02049-201ENST00000490647 H3BSH0 61 aa0.1□□□□□ -2.39
LINC02049-201ENST00000490647 DMXL2Q8TDJ6 3036 aa0.1□□□□□ -2.39
LINC02049-201ENST00000490647 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
LINC02049-201ENST00000490647 CFAP54Q96N23 3096 aa0.09□□□□□ -2.39
LINC02049-201ENST00000490647 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.39
LINC02049-201ENST00000490647 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
LINC02049-201ENST00000490647 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.4
LINC02049-201ENST00000490647 MUC2Q02817 5179 aa0.09□□□□□ -2.4
LINC02049-201ENST00000490647 PCLOQ9Y6V0 5065 aa0.08□□□□□ -2.4
LINC02049-201ENST00000490647 FSIP2Q5CZC0 6907 aa0.07□□□□□ -2.4
LINC02049-201ENST00000490647 KRTAP19-7Q3SYF9 63 aa0.06□□□□□ -2.4
LINC02049-201ENST00000490647 DOPEY1Q5JWR5 2465 aa0.04□□□□□ -2.4
LINC02049-201ENST00000490647 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
LINC02049-201ENST00000490647 DYNC1H1Q14204 4646 aaKnown RBP0.04□□□□□ -2.4
LINC02049-201ENST00000490647 MUC17Q685J3 4493 aa0.02□□□□□ -2.41
LINC02049-201ENST00000490647 K7EIM0 57 aa0.02□□□□□ -2.41
LINC02049-201ENST00000490647 RHPN1-AS1Q9BWJ2 59 aa0.02□□□□□ -2.41
LINC02049-201ENST00000490647 TRRAPQ9Y4A5 3859 aa0.02□□□□□ -2.41
LINC02049-201ENST00000490647 KMT2CQ8NEZ4 4911 aaKnown RBP0.01□□□□□ -2.41
LINC02049-201ENST00000490647 TEX15Q9BXT5 2789 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 A0A096LNI7 61 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 MT1HP80294 61 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 KRTAP19-8Q3LI54 63 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 SRCAPQ6ZRS2 3230 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 DNAH17Q9UFH2 4485 aa0□□□□□ -2.41
LINC02049-201ENST00000490647 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
LINC02049-201ENST00000490647 CEP250Q9BV73 2442 aa-0.01□□□□□ -2.41
LINC02049-201ENST00000490647 DEFB136Q30KP8 78 aa-0.02□□□□□ -2.41
LINC02049-201ENST00000490647 SMG1Q96Q15 3661 aaKnown RBP-0.02□□□□□ -2.41
LINC02049-201ENST00000490647 LRBAP50851 2863 aa-0.03□□□□□ -2.41
LINC02049-201ENST00000490647 UBR4Q5T4S7 5183 aa-0.03□□□□□ -2.41
LINC02049-201ENST00000490647 ATMQ13315 3056 aa-0.04□□□□□ -2.42
LINC02049-201ENST00000490647 CFAP46Q8IYW2 2715 aa-0.04□□□□□ -2.42
LINC02049-201ENST00000490647 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
LINC02049-201ENST00000490647 USH2AO75445 5202 aa-0.05□□□□□ -2.42
LINC02049-201ENST00000490647 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
LINC02049-201ENST00000490647 NIPBLQ6KC79 2804 aaeCLIP-0.06□□□□□ -2.42
LINC02049-201ENST00000490647 MT1EP04732 61 aa-0.07□□□□□ -2.42
LINC02049-201ENST00000490647 LAMA2P24043 3122 aaKnown RBP-0.08□□□□□ -2.42
LINC02049-201ENST00000490647 DNAH5Q8TE73 4624 aa-0.09□□□□□ -2.42
LINC02049-201ENST00000490647 TMEM167AQ8TBQ9 72 aa-0.09□□□□□ -2.42
LINC02049-201ENST00000490647 MYO9AB2RTY4 2548 aa-0.09□□□□□ -2.42
LINC02049-201ENST00000490647 PRUNE2Q8WUY3 3088 aa-0.11□□□□□ -2.43
LINC02049-201ENST00000490647 HTN1P15515 57 aa-0.11□□□□□ -2.43
LINC02049-201ENST00000490647 MT1LQ93083 61 aa-0.12□□□□□ -2.43
LINC02049-201ENST00000490647 TLN1Q9Y490 2541 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms