RNA–Protein interactions for RNA: ENST00000490478.5

CACNA2D3-210, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-210ENST00000490478 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
CACNA2D3-210ENST00000490478 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
CACNA2D3-210ENST00000490478 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
CACNA2D3-210ENST00000490478 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
CACNA2D3-210ENST00000490478 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
CACNA2D3-210ENST00000490478 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
CACNA2D3-210ENST00000490478 VPS13BQ7Z7G8 4022 aa3.44□□□□□ -1.86
CACNA2D3-210ENST00000490478 STARD9Q9P2P6 4700 aa3.44□□□□□ -1.86
CACNA2D3-210ENST00000490478 MYCBP2O75592 4640 aa3.44□□□□□ -1.86
CACNA2D3-210ENST00000490478 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
CACNA2D3-210ENST00000490478 DNHD1Q96M86 4753 aa3.4□□□□□ -1.86
CACNA2D3-210ENST00000490478 FAT2Q9NYQ8 4349 aa3.4□□□□□ -1.86
CACNA2D3-210ENST00000490478 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
CACNA2D3-210ENST00000490478 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
CACNA2D3-210ENST00000490478 PKD1P98161 4303 aa3.33□□□□□ -1.88
CACNA2D3-210ENST00000490478 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
CACNA2D3-210ENST00000490478 KRTAP10-2P60368 255 aa3.31□□□□□ -1.88
CACNA2D3-210ENST00000490478 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
CACNA2D3-210ENST00000490478 RPS29P62273 56 aaKnown RBP3.3□□□□□ -1.88
CACNA2D3-210ENST00000490478 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
CACNA2D3-210ENST00000490478 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
CACNA2D3-210ENST00000490478 HSPG2P98160 4391 aa3.28□□□□□ -1.88
CACNA2D3-210ENST00000490478 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
CACNA2D3-210ENST00000490478 M0QZ58 72 aa3.27□□□□□ -1.89
CACNA2D3-210ENST00000490478 KRTAP10-1P60331 282 aa3.26□□□□□ -1.89
CACNA2D3-210ENST00000490478 R4GN34 69 aa3.26□□□□□ -1.89
CACNA2D3-210ENST00000490478 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
CACNA2D3-210ENST00000490478 TNXBP22105 4242 aa3.2□□□□□ -1.9
CACNA2D3-210ENST00000490478 DYNC1H1Q14204 4646 aaKnown RBP3.18□□□□□ -1.9
CACNA2D3-210ENST00000490478 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
CACNA2D3-210ENST00000490478 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CACNA2D3-210ENST00000490478 HYDINQ4G0P3 5121 aa3.17□□□□□ -1.9
CACNA2D3-210ENST00000490478 J3QKU1 62 aa3.16□□□□□ -1.9
CACNA2D3-210ENST00000490478 LPAP08519 4548 aa3.16□□□□□ -1.9
CACNA2D3-210ENST00000490478 FAT1Q14517 4588 aa3.14□□□□□ -1.91
CACNA2D3-210ENST00000490478 INE1O15225 51 aa3.11□□□□□ -1.91
CACNA2D3-210ENST00000490478 SMR3BP02814 79 aaPredicted RBP3.08□□□□□ -1.92
CACNA2D3-210ENST00000490478 RYR3Q15413 4870 aa3.04□□□□□ -1.92
CACNA2D3-210ENST00000490478 KRTAP10-4P60372 401 aaPredicted RBP3.02□□□□□ -1.93
CACNA2D3-210ENST00000490478 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
CACNA2D3-210ENST00000490478 LRP2P98164 4655 aa2.98□□□□□ -1.93
CACNA2D3-210ENST00000490478 TNP1P09430 55 aa2.94□□□□□ -1.94
CACNA2D3-210ENST00000490478 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
CACNA2D3-210ENST00000490478 KRTAP17-1Q9BYP8 105 aa2.91□□□□□ -1.94
CACNA2D3-210ENST00000490478 Q5VSD8 79 aa2.9□□□□□ -1.94
CACNA2D3-210ENST00000490478 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.95
CACNA2D3-210ENST00000490478 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
CACNA2D3-210ENST00000490478 MUC17Q685J3 4493 aa2.84□□□□□ -1.95
CACNA2D3-210ENST00000490478 RYR2Q92736 4967 aa2.84□□□□□ -1.95
CACNA2D3-210ENST00000490478 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
CACNA2D3-210ENST00000490478 HERC2O95714 4834 aa2.81□□□□□ -1.96
CACNA2D3-210ENST00000490478 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
CACNA2D3-210ENST00000490478 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
CACNA2D3-210ENST00000490478 RYR1P21817 5038 aa2.8□□□□□ -1.96
CACNA2D3-210ENST00000490478 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
CACNA2D3-210ENST00000490478 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
CACNA2D3-210ENST00000490478 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
CACNA2D3-210ENST00000490478 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CACNA2D3-210ENST00000490478 ABCA13Q86UQ4 5058 aa2.72□□□□□ -1.97
CACNA2D3-210ENST00000490478 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
CACNA2D3-210ENST00000490478 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.97
CACNA2D3-210ENST00000490478 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP8-1Q8IUC2 63 aa2.69□□□□□ -1.98
CACNA2D3-210ENST00000490478 HERC1Q15751 4861 aa2.68□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP9-6A0A140TA67 174 aa2.67□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP9-7A8MTY7 169 aa2.67□□□□□ -1.98
CACNA2D3-210ENST00000490478 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
CACNA2D3-210ENST00000490478 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
CACNA2D3-210ENST00000490478 MUC2Q02817 5179 aa2.63□□□□□ -1.99
CACNA2D3-210ENST00000490478 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
CACNA2D3-210ENST00000490478 KRTAP10-5P60370 271 aa2.59□□□□□ -2
CACNA2D3-210ENST00000490478 KRTAP19-1Q8IUB9 90 aa2.56□□□□□ -2
CACNA2D3-210ENST00000490478 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
CACNA2D3-210ENST00000490478 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
CACNA2D3-210ENST00000490478 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
CACNA2D3-210ENST00000490478 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2.01
CACNA2D3-210ENST00000490478 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2.01
CACNA2D3-210ENST00000490478 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2.01
CACNA2D3-210ENST00000490478 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2.01
CACNA2D3-210ENST00000490478 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
CACNA2D3-210ENST00000490478 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CACNA2D3-210ENST00000490478 HMCN2Q8NDA2 5059 aa2.47□□□□□ -2.01
CACNA2D3-210ENST00000490478 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.01
CACNA2D3-210ENST00000490478 KRTAP9-3Q9BYQ3 159 aa2.46□□□□□ -2.01
CACNA2D3-210ENST00000490478 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
CACNA2D3-210ENST00000490478 MT1XP80297 61 aa2.45□□□□□ -2.02
CACNA2D3-210ENST00000490478 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
CACNA2D3-210ENST00000490478 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
CACNA2D3-210ENST00000490478 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
CACNA2D3-210ENST00000490478 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
CACNA2D3-210ENST00000490478 MT1BP07438 61 aa2.36□□□□□ -2.03
CACNA2D3-210ENST00000490478 KMT2DO14686 5537 aa2.36□□□□□ -2.03
CACNA2D3-210ENST00000490478 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
CACNA2D3-210ENST00000490478 MT1FP04733 61 aa2.35□□□□□ -2.03
CACNA2D3-210ENST00000490478 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
CACNA2D3-210ENST00000490478 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
CACNA2D3-210ENST00000490478 M0R2T5 61 aa2.34□□□□□ -2.03
CACNA2D3-210ENST00000490478 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 286.1 ms