RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
COL9A1-209ENST00000489861 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
COL9A1-209ENST00000489861 SPRR2DP22532 72 aa3.4□□□□□ -1.87
COL9A1-209ENST00000489861 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
COL9A1-209ENST00000489861 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
COL9A1-209ENST00000489861 TAX1BP3O14907 124 aa3.39□□□□□ -1.87
COL9A1-209ENST00000489861 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
COL9A1-209ENST00000489861 CXCL6P80162 114 aa3.39□□□□□ -1.87
COL9A1-209ENST00000489861 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
COL9A1-209ENST00000489861 MT1BP07438 61 aa3.38□□□□□ -1.87
COL9A1-209ENST00000489861 COL5A1-AS1Q5SY13 56 aa3.38□□□□□ -1.87
COL9A1-209ENST00000489861 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
COL9A1-209ENST00000489861 IGKV2-30P06310 120 aa3.37□□□□□ -1.87
COL9A1-209ENST00000489861 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
COL9A1-209ENST00000489861 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
COL9A1-209ENST00000489861 GTF2H5Q6ZYL4 71 aa3.35□□□□□ -1.87
COL9A1-209ENST00000489861 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
COL9A1-209ENST00000489861 FAM236AA0A1B0GUQ0 79 aa3.32□□□□□ -1.88
COL9A1-209ENST00000489861 FAM236BA0A1B0GV22 79 aa3.32□□□□□ -1.88
COL9A1-209ENST00000489861 F8W1H4 67 aa3.32□□□□□ -1.88
COL9A1-209ENST00000489861 K7EP34 96 aa3.32□□□□□ -1.88
COL9A1-209ENST00000489861 Q5W150 140 aa3.31□□□□□ -1.88
COL9A1-209ENST00000489861 Q8N9L7 120 aa3.31□□□□□ -1.88
COL9A1-209ENST00000489861 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
COL9A1-209ENST00000489861 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
COL9A1-209ENST00000489861 ACYP1P07311 99 aa3.28□□□□□ -1.88
COL9A1-209ENST00000489861 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
COL9A1-209ENST00000489861 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
COL9A1-209ENST00000489861 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
COL9A1-209ENST00000489861 S4R3F8 94 aa3.28□□□□□ -1.88
COL9A1-209ENST00000489861 Q5VV11 94 aa3.27□□□□□ -1.89
COL9A1-209ENST00000489861 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
COL9A1-209ENST00000489861 KRTAP19-8Q3LI54 63 aa3.25□□□□□ -1.89
COL9A1-209ENST00000489861 ATP5EP2Q5VTU8 51 aa3.25□□□□□ -1.89
COL9A1-209ENST00000489861 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
COL9A1-209ENST00000489861 C5orf47Q569G3 176 aa3.24□□□□□ -1.89
COL9A1-209ENST00000489861 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
COL9A1-209ENST00000489861 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
COL9A1-209ENST00000489861 ATOX1O00244 68 aa3.23□□□□□ -1.89
COL9A1-209ENST00000489861 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
COL9A1-209ENST00000489861 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
COL9A1-209ENST00000489861 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
COL9A1-209ENST00000489861 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
COL9A1-209ENST00000489861 UQCRQO14949 82 aa3.21□□□□□ -1.9
COL9A1-209ENST00000489861 IMUPQ9GZP8 106 aa3.21□□□□□ -1.9
COL9A1-209ENST00000489861 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
COL9A1-209ENST00000489861 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
COL9A1-209ENST00000489861 LCA10Q71F78 164 aa3.2□□□□□ -1.9
COL9A1-209ENST00000489861 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
COL9A1-209ENST00000489861 HIST1H4AP62805 103 aaKnown RBP3.19□□□□□ -1.9
COL9A1-209ENST00000489861 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
COL9A1-209ENST00000489861 A8MUN3 132 aa3.18□□□□□ -1.9
COL9A1-209ENST00000489861 NDUFC1O43677 76 aa3.16□□□□□ -1.9
COL9A1-209ENST00000489861 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
COL9A1-209ENST00000489861 H0Y9P7 68 aa3.15□□□□□ -1.91
COL9A1-209ENST00000489861 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
COL9A1-209ENST00000489861 MP68P56378 58 aa3.14□□□□□ -1.91
COL9A1-209ENST00000489861 H0YAA0 97 aa3.13□□□□□ -1.91
COL9A1-209ENST00000489861 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
COL9A1-209ENST00000489861 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
COL9A1-209ENST00000489861 J3QR89 54 aa3.12□□□□□ -1.91
COL9A1-209ENST00000489861 H3BPC8 53 aa3.11□□□□□ -1.91
COL9A1-209ENST00000489861 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
COL9A1-209ENST00000489861 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
COL9A1-209ENST00000489861 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-209ENST00000489861 LINC00208Q96KT6 92 aa3.09□□□□□ -1.91
COL9A1-209ENST00000489861 SCGB1A1P11684 91 aa3.07□□□□□ -1.92
COL9A1-209ENST00000489861 A0A087WVE0 104 aa3.06□□□□□ -1.92
COL9A1-209ENST00000489861 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
COL9A1-209ENST00000489861 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
COL9A1-209ENST00000489861 OCR1Q9BZK8 76 aa3.05□□□□□ -1.92
COL9A1-209ENST00000489861 MT4P47944 62 aa3.04□□□□□ -1.92
COL9A1-209ENST00000489861 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
COL9A1-209ENST00000489861 MT1XP80297 61 aa3.03□□□□□ -1.92
COL9A1-209ENST00000489861 R4GN34 69 aa3.03□□□□□ -1.92
COL9A1-209ENST00000489861 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
COL9A1-209ENST00000489861 SEC61GP60059 68 aa3.02□□□□□ -1.93
COL9A1-209ENST00000489861 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
COL9A1-209ENST00000489861 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
COL9A1-209ENST00000489861 A0A1B0GV90 55 aa3□□□□□ -1.93
COL9A1-209ENST00000489861 DMAC1Q96GE9 116 aa3□□□□□ -1.93
COL9A1-209ENST00000489861 TRAV7A0A075B6U4 112 aa2.99□□□□□ -1.93
COL9A1-209ENST00000489861 ACYP2P14621 99 aa2.99□□□□□ -1.93
COL9A1-209ENST00000489861 M0QZ58 72 aa2.96□□□□□ -1.94
COL9A1-209ENST00000489861 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
COL9A1-209ENST00000489861 K7ERU9 68 aa2.95□□□□□ -1.94
COL9A1-209ENST00000489861 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
COL9A1-209ENST00000489861 MT-ATP8P03928 68 aa2.92□□□□□ -1.94
COL9A1-209ENST00000489861 P0C880 135 aa2.92□□□□□ -1.94
COL9A1-209ENST00000489861 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
COL9A1-209ENST00000489861 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
COL9A1-209ENST00000489861 LINC01554Q52M75 96 aa2.9□□□□□ -1.95
COL9A1-209ENST00000489861 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
COL9A1-209ENST00000489861 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
COL9A1-209ENST00000489861 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
COL9A1-209ENST00000489861 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
COL9A1-209ENST00000489861 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
COL9A1-209ENST00000489861 SNURFQ9Y675 71 aa2.82□□□□□ -1.96
COL9A1-209ENST00000489861 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
COL9A1-209ENST00000489861 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms