RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PRR15Q8IV56 129 aa3.94□□□□□ -1.78
EXOSC3-206ENST00000489414 LINC00472Q9H8W2 130 aa3.94□□□□□ -1.78
EXOSC3-206ENST00000489414 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
EXOSC3-206ENST00000489414 CASC2Q6XLA1 102 aa3.93□□□□□ -1.78
EXOSC3-206ENST00000489414 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
EXOSC3-206ENST00000489414 ANAPC11Q9NYG5 84 aa3.93□□□□□ -1.78
EXOSC3-206ENST00000489414 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
EXOSC3-206ENST00000489414 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
EXOSC3-206ENST00000489414 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
EXOSC3-206ENST00000489414 C5orf47Q569G3 176 aa3.91□□□□□ -1.78
EXOSC3-206ENST00000489414 MP68P56378 58 aa3.9□□□□□ -1.79
EXOSC3-206ENST00000489414 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
EXOSC3-206ENST00000489414 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
EXOSC3-206ENST00000489414 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
EXOSC3-206ENST00000489414 SPRR2DP22532 72 aa3.89□□□□□ -1.79
EXOSC3-206ENST00000489414 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
EXOSC3-206ENST00000489414 FAM236DA0A1B0GTK5 79 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 A0A1B0GVX0 72 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 FAM236CP0DP71 79 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 Q96NJ1 140 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
EXOSC3-206ENST00000489414 IGHV6-1A0A0B4J1U7 121 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 H3BPC8 53 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 H7BZZ5 65 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 C8orf17Q9NRJ1 99 aa3.87□□□□□ -1.79
EXOSC3-206ENST00000489414 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
EXOSC3-206ENST00000489414 NDUFS5O43920 106 aa3.86□□□□□ -1.79
EXOSC3-206ENST00000489414 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-206ENST00000489414 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
EXOSC3-206ENST00000489414 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
EXOSC3-206ENST00000489414 H0Y9P7 68 aa3.85□□□□□ -1.79
EXOSC3-206ENST00000489414 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
EXOSC3-206ENST00000489414 Q5XG85 94 aa3.85□□□□□ -1.79
EXOSC3-206ENST00000489414 TRAV22A0A0B4J277 110 aa3.84□□□□□ -1.79
EXOSC3-206ENST00000489414 SPINK1P00995 79 aa3.84□□□□□ -1.79
EXOSC3-206ENST00000489414 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
EXOSC3-206ENST00000489414 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
EXOSC3-206ENST00000489414 LINC00208Q96KT6 92 aa3.83□□□□□ -1.8
EXOSC3-206ENST00000489414 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
EXOSC3-206ENST00000489414 LINC00313P59037 77 aa3.81□□□□□ -1.8
EXOSC3-206ENST00000489414 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-206ENST00000489414 C1orf64Q8NEQ6 169 aa3.81□□□□□ -1.8
EXOSC3-206ENST00000489414 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-206ENST00000489414 A6NN06 94 aa3.8□□□□□ -1.8
EXOSC3-206ENST00000489414 C1orf195Q5TG92 126 aa3.8□□□□□ -1.8
EXOSC3-206ENST00000489414 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-206ENST00000489414 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
EXOSC3-206ENST00000489414 LOC101927531A0A1B0GV80 90 aa3.76□□□□□ -1.81
EXOSC3-206ENST00000489414 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
EXOSC3-206ENST00000489414 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
EXOSC3-206ENST00000489414 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
EXOSC3-206ENST00000489414 CYP4F30PQ9H0H9 118 aa3.75□□□□□ -1.81
EXOSC3-206ENST00000489414 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
EXOSC3-206ENST00000489414 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
EXOSC3-206ENST00000489414 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
EXOSC3-206ENST00000489414 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
EXOSC3-206ENST00000489414 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
EXOSC3-206ENST00000489414 Q5W150 140 aa3.68□□□□□ -1.82
EXOSC3-206ENST00000489414 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
EXOSC3-206ENST00000489414 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
EXOSC3-206ENST00000489414 V9GYY9 64 aa3.67□□□□□ -1.82
EXOSC3-206ENST00000489414 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
EXOSC3-206ENST00000489414 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
EXOSC3-206ENST00000489414 ACYP2P14621 99 aa3.65□□□□□ -1.83
EXOSC3-206ENST00000489414 COA5Q86WW8 74 aa3.65□□□□□ -1.83
EXOSC3-206ENST00000489414 MPLKIPQ8TAP9 179 aa3.65□□□□□ -1.83
EXOSC3-206ENST00000489414 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
EXOSC3-206ENST00000489414 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
EXOSC3-206ENST00000489414 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
EXOSC3-206ENST00000489414 HRES1P13985 223 aa3.63□□□□□ -1.83
EXOSC3-206ENST00000489414 Q1T7F1 81 aa3.63□□□□□ -1.83
EXOSC3-206ENST00000489414 A8MUU9 505 aa3.62□□□□□ -1.83
EXOSC3-206ENST00000489414 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
EXOSC3-206ENST00000489414 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
EXOSC3-206ENST00000489414 DMAC1Q96GE9 116 aa3.61□□□□□ -1.83
EXOSC3-206ENST00000489414 Q75L30 129 aa3.59□□□□□ -1.83
EXOSC3-206ENST00000489414 A8MUN3 132 aa3.58□□□□□ -1.84
EXOSC3-206ENST00000489414 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
EXOSC3-206ENST00000489414 PSPHP1O15172 72 aa3.56□□□□□ -1.84
EXOSC3-206ENST00000489414 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
EXOSC3-206ENST00000489414 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
EXOSC3-206ENST00000489414 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
EXOSC3-206ENST00000489414 SPINK7P58062 85 aa3.54□□□□□ -1.84
EXOSC3-206ENST00000489414 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
EXOSC3-206ENST00000489414 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
EXOSC3-206ENST00000489414 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
EXOSC3-206ENST00000489414 MT1BP07438 61 aa3.5□□□□□ -1.85
EXOSC3-206ENST00000489414 Q5VV11 94 aa3.5□□□□□ -1.85
EXOSC3-206ENST00000489414 A0A1B0GU69 56 aa3.49□□□□□ -1.85
EXOSC3-206ENST00000489414 A6NED7 52 aa3.49□□□□□ -1.85
EXOSC3-206ENST00000489414 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
EXOSC3-206ENST00000489414 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
EXOSC3-206ENST00000489414 MT4P47944 62 aa3.48□□□□□ -1.85
EXOSC3-206ENST00000489414 SEC61GP60059 68 aa3.48□□□□□ -1.85
EXOSC3-206ENST00000489414 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
EXOSC3-206ENST00000489414 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
EXOSC3-206ENST00000489414 UQCR11O14957 56 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms