RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MAST1Q9Y2H9 1570 aa-0.6□□□□□ -2.51
XRN1-213ENST00000489241 KRTAP19-5Q3LI72 72 aa-0.6□□□□□ -2.51
XRN1-213ENST00000489241 FAM208AQ9UK61 1670 aaKnown RBP-0.6□□□□□ -2.51
XRN1-213ENST00000489241 USH2AO75445 5202 aa-0.61□□□□□ -2.51
XRN1-213ENST00000489241 SPTBN5Q9NRC6 3674 aaKnown RBP-0.61□□□□□ -2.51
XRN1-213ENST00000489241 PRXQ9BXM0 1461 aa-0.61□□□□□ -2.51
XRN1-213ENST00000489241 USP9XQ93008 2570 aaPredicted RBP-0.61□□□□□ -2.51
XRN1-213ENST00000489241 M0QZ58 72 aa-0.62□□□□□ -2.51
XRN1-213ENST00000489241 MT1HP80294 61 aa-0.62□□□□□ -2.51
XRN1-213ENST00000489241 RELNP78509 3460 aa-0.62□□□□□ -2.51
XRN1-213ENST00000489241 COL6A5A8TX70 2615 aa-0.62□□□□□ -2.51
XRN1-213ENST00000489241 DNAH8Q96JB1 4490 aa-0.63□□□□□ -2.51
XRN1-213ENST00000489241 A8MTW9 85 aa-0.63□□□□□ -2.51
XRN1-213ENST00000489241 CELSR3Q9NYQ7 3312 aa-0.63□□□□□ -2.51
XRN1-213ENST00000489241 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.64□□□□□ -2.51
XRN1-213ENST00000489241 HERC2O95714 4834 aa-0.64□□□□□ -2.51
XRN1-213ENST00000489241 SMR3BP02814 79 aaPredicted RBP-0.65□□□□□ -2.51
XRN1-213ENST00000489241 KRTAP8-1Q8IUC2 63 aa-0.66□□□□□ -2.52
XRN1-213ENST00000489241 PREX2Q70Z35 1606 aa-0.67□□□□□ -2.52
XRN1-213ENST00000489241 KIF21BO75037 1637 aa-0.67□□□□□ -2.52
XRN1-213ENST00000489241 ERICH3Q5RHP9 1530 aa-0.68□□□□□ -2.52
XRN1-213ENST00000489241 MROH2AA6NES4 1674 aa-0.68□□□□□ -2.52
XRN1-213ENST00000489241 FRYQ5TBA9 3013 aa-0.68□□□□□ -2.52
XRN1-213ENST00000489241 PLECQ15149 4684 aaKnown RBP-0.68□□□□□ -2.52
XRN1-213ENST00000489241 PLNP26678 52 aa-0.68□□□□□ -2.52
XRN1-213ENST00000489241 LMO7Q8WWI1 1683 aa-0.69□□□□□ -2.52
XRN1-213ENST00000489241 AGLP35573 1532 aa-0.69□□□□□ -2.52
XRN1-213ENST00000489241 ITPR1Q14643 2758 aa-0.69□□□□□ -2.52
XRN1-213ENST00000489241 C5orf42Q9H799 3197 aa-0.69□□□□□ -2.52
XRN1-213ENST00000489241 SRCAPQ6ZRS2 3230 aa-0.7□□□□□ -2.52
XRN1-213ENST00000489241 TFF3Q07654 80 aa-0.7□□□□□ -2.52
XRN1-213ENST00000489241 SPART-AS1P0CW21 52 aa-0.71□□□□□ -2.52
XRN1-213ENST00000489241 TEX15Q9BXT5 2789 aa-0.72□□□□□ -2.52
XRN1-213ENST00000489241 SPTAN1Q13813 2472 aaKnown RBP-0.73□□□□□ -2.53
XRN1-213ENST00000489241 DDX60Q8IY21 1712 aaKnown RBP-0.73□□□□□ -2.53
XRN1-213ENST00000489241 ADGRG4Q8IZF6 3080 aa-0.73□□□□□ -2.53
XRN1-213ENST00000489241 RYR1P21817 5038 aa-0.74□□□□□ -2.53
XRN1-213ENST00000489241 LINC01546A6NGU7 62 aa-0.75□□□□□ -2.53
XRN1-213ENST00000489241 DEFB131AP59861 70 aa-0.75□□□□□ -2.53
XRN1-213ENST00000489241 DOPEY1Q5JWR5 2465 aa-0.75□□□□□ -2.53
XRN1-213ENST00000489241 SYCP2Q9BX26 1530 aa-0.75□□□□□ -2.53
XRN1-213ENST00000489241 ABCA5Q8WWZ7 1642 aa-0.75□□□□□ -2.53
XRN1-213ENST00000489241 DNAH7Q8WXX0 4024 aa-0.76□□□□□ -2.53
XRN1-213ENST00000489241 ADCY10Q96PN6 1610 aa-0.76□□□□□ -2.53
XRN1-213ENST00000489241 NIPBLQ6KC79 2804 aaeCLIP-0.76□□□□□ -2.53
XRN1-213ENST00000489241 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
XRN1-213ENST00000489241 RYR3Q15413 4870 aa-0.76□□□□□ -2.53
XRN1-213ENST00000489241 EPPK1P58107 5090 aaKnown RBP-0.77□□□□□ -2.53
XRN1-213ENST00000489241 CMC2Q9NRP2 79 aa-0.77□□□□□ -2.53
XRN1-213ENST00000489241 KIAA1109Q2LD37 5005 aa-0.77□□□□□ -2.53
XRN1-213ENST00000489241 HYDINQ4G0P3 5121 aa-0.78□□□□□ -2.53
XRN1-213ENST00000489241 SMIM2Q9BVW6 85 aa-0.78□□□□□ -2.53
XRN1-213ENST00000489241 CMYA5Q8N3K9 4069 aa-0.78□□□□□ -2.53
XRN1-213ENST00000489241 CHD7Q9P2D1 2997 aa-0.78□□□□□ -2.53
XRN1-213ENST00000489241 LRBAP50851 2863 aa-0.78□□□□□ -2.54
XRN1-213ENST00000489241 DYNC1H1Q14204 4646 aaKnown RBP-0.8□□□□□ -2.54
XRN1-213ENST00000489241 MT1XP80297 61 aa-0.8□□□□□ -2.54
XRN1-213ENST00000489241 ABCC8Q09428 1581 aa-0.8□□□□□ -2.54
XRN1-213ENST00000489241 NRXN3Q9Y4C0 1643 aa-0.81□□□□□ -2.54
XRN1-213ENST00000489241 MGAQ8IWI9 3026 aa-0.81□□□□□ -2.54
XRN1-213ENST00000489241 POLR2KP53803 58 aaKnown RBP-0.81□□□□□ -2.54
XRN1-213ENST00000489241 IQGAP1P46940 1657 aa-0.81□□□□□ -2.54
XRN1-213ENST00000489241 CSMD1Q96PZ7 3565 aa-0.82□□□□□ -2.54
XRN1-213ENST00000489241 BIRC6Q9NR09 4857 aa-0.82□□□□□ -2.54
XRN1-213ENST00000489241 MT1EP04732 61 aa-0.82□□□□□ -2.54
XRN1-213ENST00000489241 DNHD1Q96M86 4753 aa-0.83□□□□□ -2.54
XRN1-213ENST00000489241 LAMA2P24043 3122 aaKnown RBP-0.83□□□□□ -2.54
XRN1-213ENST00000489241 MYO9AB2RTY4 2548 aa-0.83□□□□□ -2.54
XRN1-213ENST00000489241 DNAH10Q8IVF4 4471 aa-0.85□□□□□ -2.54
XRN1-213ENST00000489241 FANCD2Q9BXW9 1451 aa-0.85□□□□□ -2.55
XRN1-213ENST00000489241 DNAH17Q9UFH2 4485 aa-0.85□□□□□ -2.55
XRN1-213ENST00000489241 MT1LQ93083 61 aa-0.87□□□□□ -2.55
XRN1-213ENST00000489241 CLTCL1P53675 1640 aa-0.89□□□□□ -2.55
XRN1-213ENST00000489241 MT1HL1P0DM35 61 aa-0.89□□□□□ -2.55
XRN1-213ENST00000489241 ZFHX4Q86UP3 3567 aa-0.89□□□□□ -2.55
XRN1-213ENST00000489241 RYR2Q92736 4967 aa-0.89□□□□□ -2.55
XRN1-213ENST00000489241 NFAT5O94916 1531 aa-0.9□□□□□ -2.55
XRN1-213ENST00000489241 CFAP46Q8IYW2 2715 aa-0.9□□□□□ -2.55
XRN1-213ENST00000489241 EYSQ5T1H1 3165 aa-0.92□□□□□ -2.56
XRN1-213ENST00000489241 TRPM2O94759 1503 aa-0.92□□□□□ -2.56
XRN1-213ENST00000489241 RNF213Q63HN8 5207 aa-0.93□□□□□ -2.56
XRN1-213ENST00000489241 SNRPGP15A8MWD9 76 aa-0.94□□□□□ -2.56
XRN1-213ENST00000489241 NDUFA1O15239 70 aa-0.94□□□□□ -2.56
XRN1-213ENST00000489241 LEAP2Q969E1 77 aa-0.94□□□□□ -2.56
XRN1-213ENST00000489241 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
XRN1-213ENST00000489241 CRYBG3Q68DQ2 2970 aa-0.99□□□□□ -2.57
XRN1-213ENST00000489241 CEP295Q9C0D2 2601 aa-1□□□□□ -2.57
XRN1-213ENST00000489241 MT1GP13640 62 aa-1□□□□□ -2.57
XRN1-213ENST00000489241 DEFB4AO15263 64 aa-1.02□□□□□ -2.57
XRN1-213ENST00000489241 KRTAP20-1Q3LI63 56 aa-1.02□□□□□ -2.57
XRN1-213ENST00000489241 DMXL2Q8TDJ6 3036 aa-1.02□□□□□ -2.57
XRN1-213ENST00000489241 DNAH5Q8TE73 4624 aa-1.03□□□□□ -2.57
XRN1-213ENST00000489241 DEFB136Q30KP8 78 aa-1.04□□□□□ -2.58
XRN1-213ENST00000489241 TLN1Q9Y490 2541 aaKnown RBP-1.05□□□□□ -2.58
XRN1-213ENST00000489241 MT1BP07438 61 aa-1.05□□□□□ -2.58
XRN1-213ENST00000489241 CSMD2Q7Z408 3487 aa-1.05□□□□□ -2.58
XRN1-213ENST00000489241 ITPR2Q14571 2701 aa-1.06□□□□□ -2.58
XRN1-213ENST00000489241 MT1MQ8N339 61 aa-1.06□□□□□ -2.58
XRN1-213ENST00000489241 SMG1Q96Q15 3661 aaKnown RBP-1.06□□□□□ -2.58
XRN1-213ENST00000489241 MT2AP02795 61 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms