RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
EPHA1-205ENST00000488068 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
EPHA1-205ENST00000488068 XP32Q5T750 250 aa7.83□□□□□ -1.16
EPHA1-205ENST00000488068 EPPK1P58107 5090 aaKnown RBP7.83□□□□□ -1.16
EPHA1-205ENST00000488068 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
EPHA1-205ENST00000488068 H0YAA0 97 aa7.81□□□□□ -1.16
EPHA1-205ENST00000488068 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
EPHA1-205ENST00000488068 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
EPHA1-205ENST00000488068 H3BS24 57 aa7.76□□□□□ -1.17
EPHA1-205ENST00000488068 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
EPHA1-205ENST00000488068 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
EPHA1-205ENST00000488068 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
EPHA1-205ENST00000488068 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
EPHA1-205ENST00000488068 A0A1B0GU33 70 aa7.69□□□□□ -1.18
EPHA1-205ENST00000488068 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
EPHA1-205ENST00000488068 ROMO1P60602 79 aa7.58□□□□□ -1.2
EPHA1-205ENST00000488068 J3QL48 77 aa7.51□□□□□ -1.21
EPHA1-205ENST00000488068 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
EPHA1-205ENST00000488068 K7ERS5 55 aa7.5□□□□□ -1.21
EPHA1-205ENST00000488068 S4R3F8 94 aa7.5□□□□□ -1.21
EPHA1-205ENST00000488068 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
EPHA1-205ENST00000488068 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
EPHA1-205ENST00000488068 LRP2P98164 4655 aa7.46□□□□□ -1.21
EPHA1-205ENST00000488068 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
EPHA1-205ENST00000488068 HERC2O95714 4834 aa7.45□□□□□ -1.22
EPHA1-205ENST00000488068 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
EPHA1-205ENST00000488068 LPAP08519 4548 aa7.42□□□□□ -1.22
EPHA1-205ENST00000488068 P0C880 135 aa7.38□□□□□ -1.23
EPHA1-205ENST00000488068 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
EPHA1-205ENST00000488068 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
EPHA1-205ENST00000488068 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
EPHA1-205ENST00000488068 A0A0D9SG42 100 aa7.29□□□□□ -1.24
EPHA1-205ENST00000488068 MUC17Q685J3 4493 aa7.27□□□□□ -1.25
EPHA1-205ENST00000488068 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
EPHA1-205ENST00000488068 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
EPHA1-205ENST00000488068 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
EPHA1-205ENST00000488068 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
EPHA1-205ENST00000488068 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
EPHA1-205ENST00000488068 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
EPHA1-205ENST00000488068 M0QZ58 72 aa7.08□□□□□ -1.28
EPHA1-205ENST00000488068 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
EPHA1-205ENST00000488068 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
EPHA1-205ENST00000488068 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
EPHA1-205ENST00000488068 HERC1Q15751 4861 aa7.01□□□□□ -1.29
EPHA1-205ENST00000488068 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
EPHA1-205ENST00000488068 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
EPHA1-205ENST00000488068 R4GN34 69 aa6.92□□□□□ -1.3
EPHA1-205ENST00000488068 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
EPHA1-205ENST00000488068 MUC2Q02817 5179 aa6.81□□□□□ -1.32
EPHA1-205ENST00000488068 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
EPHA1-205ENST00000488068 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
EPHA1-205ENST00000488068 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
EPHA1-205ENST00000488068 MT1HP80294 61 aa6.65□□□□□ -1.35
EPHA1-205ENST00000488068 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
EPHA1-205ENST00000488068 M0R2T5 61 aa6.6□□□□□ -1.35
EPHA1-205ENST00000488068 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
EPHA1-205ENST00000488068 FAT4Q6V0I7 4981 aa6.53□□□□□ -1.36
EPHA1-205ENST00000488068 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
EPHA1-205ENST00000488068 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
EPHA1-205ENST00000488068 MT2AP02795 61 aa6.46□□□□□ -1.37
EPHA1-205ENST00000488068 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
EPHA1-205ENST00000488068 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
EPHA1-205ENST00000488068 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
EPHA1-205ENST00000488068 MT1FP04733 61 aa6.43□□□□□ -1.38
EPHA1-205ENST00000488068 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
EPHA1-205ENST00000488068 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
EPHA1-205ENST00000488068 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
EPHA1-205ENST00000488068 TNP1P09430 55 aa6.28□□□□□ -1.4
EPHA1-205ENST00000488068 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
EPHA1-205ENST00000488068 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
EPHA1-205ENST00000488068 MT1BP07438 61 aa6.17□□□□□ -1.42
EPHA1-205ENST00000488068 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
EPHA1-205ENST00000488068 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
EPHA1-205ENST00000488068 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
EPHA1-205ENST00000488068 MT1XP80297 61 aa6.05□□□□□ -1.44
EPHA1-205ENST00000488068 LCE2BO14633 110 aa5.97□□□□□ -1.45
EPHA1-205ENST00000488068 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
EPHA1-205ENST00000488068 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
EPHA1-205ENST00000488068 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
EPHA1-205ENST00000488068 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
EPHA1-205ENST00000488068 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
EPHA1-205ENST00000488068 USH2AO75445 5202 aa5.7□□□□□ -1.5
EPHA1-205ENST00000488068 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
EPHA1-205ENST00000488068 INE1O15225 51 aa5.62□□□□□ -1.51
EPHA1-205ENST00000488068 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
EPHA1-205ENST00000488068 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
EPHA1-205ENST00000488068 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
EPHA1-205ENST00000488068 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
EPHA1-205ENST00000488068 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
EPHA1-205ENST00000488068 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
EPHA1-205ENST00000488068 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
EPHA1-205ENST00000488068 KMT2DO14686 5537 aa5.41□□□□□ -1.54
EPHA1-205ENST00000488068 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
EPHA1-205ENST00000488068 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
EPHA1-205ENST00000488068 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
EPHA1-205ENST00000488068 MT1EP04732 61 aa5.28□□□□□ -1.56
EPHA1-205ENST00000488068 MT1LQ93083 61 aa5.23□□□□□ -1.57
EPHA1-205ENST00000488068 FCGBPQ9Y6R7 5405 aaPredicted RBP5.15□□□□□ -1.59
EPHA1-205ENST00000488068 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
EPHA1-205ENST00000488068 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms