RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
SMPDL3A-202ENST00000487215 K7EP34 96 aa8.5□□□□□ -1.05
SMPDL3A-202ENST00000487215 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
SMPDL3A-202ENST00000487215 GTF2H5Q6ZYL4 71 aa8.43□□□□□ -1.06
SMPDL3A-202ENST00000487215 PCP4L1A6NKN8 68 aa8.42□□□□□ -1.06
SMPDL3A-202ENST00000487215 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
SMPDL3A-202ENST00000487215 F8W1H4 67 aa8.39□□□□□ -1.07
SMPDL3A-202ENST00000487215 SPRR2FQ96RM1 72 aa8.39□□□□□ -1.07
SMPDL3A-202ENST00000487215 SPRR2EP22531 72 aa8.38□□□□□ -1.07
SMPDL3A-202ENST00000487215 SPRR2BP35325 72 aa8.38□□□□□ -1.07
SMPDL3A-202ENST00000487215 SPRR2AP35326 72 aa8.38□□□□□ -1.07
SMPDL3A-202ENST00000487215 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
SMPDL3A-202ENST00000487215 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
SMPDL3A-202ENST00000487215 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
SMPDL3A-202ENST00000487215 ETDBQ3ZM63 59 aa8.33□□□□□ -1.08
SMPDL3A-202ENST00000487215 ACYP1P07311 99 aa8.26□□□□□ -1.09
SMPDL3A-202ENST00000487215 KRTAP2-2Q9BYT5 123 aa8.25□□□□□ -1.09
SMPDL3A-202ENST00000487215 KRTAP2-1Q9BYU5 128 aa8.25□□□□□ -1.09
SMPDL3A-202ENST00000487215 A0A087WVE0 104 aa8.24□□□□□ -1.09
SMPDL3A-202ENST00000487215 NDUFC1O43677 76 aa8.24□□□□□ -1.09
SMPDL3A-202ENST00000487215 ATOX1O00244 68 aa8.23□□□□□ -1.09
SMPDL3A-202ENST00000487215 UQCRQO14949 82 aa8.22□□□□□ -1.09
SMPDL3A-202ENST00000487215 ATP5EP2Q5VTU8 51 aa8.22□□□□□ -1.09
SMPDL3A-202ENST00000487215 LCE1AQ5T7P2 110 aa8.21□□□□□ -1.1
SMPDL3A-202ENST00000487215 H0YAA0 97 aa8.2□□□□□ -1.1
SMPDL3A-202ENST00000487215 KRTAP8-1Q8IUC2 63 aa8.19□□□□□ -1.1
SMPDL3A-202ENST00000487215 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
SMPDL3A-202ENST00000487215 HIST1H4AP62805 103 aaKnown RBP8.18□□□□□ -1.1
SMPDL3A-202ENST00000487215 MT1XP80297 61 aa8.18□□□□□ -1.1
SMPDL3A-202ENST00000487215 H0Y9P7 68 aa8.17□□□□□ -1.1
SMPDL3A-202ENST00000487215 FAM240AA0A1B0GVK7 77 aa8.16□□□□□ -1.1
SMPDL3A-202ENST00000487215 A8MUN3 132 aa8.16□□□□□ -1.1
SMPDL3A-202ENST00000487215 SPRR2DP22532 72 aa8.1□□□□□ -1.11
SMPDL3A-202ENST00000487215 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
SMPDL3A-202ENST00000487215 ADM2Q7Z4H4 148 aa8.07□□□□□ -1.12
SMPDL3A-202ENST00000487215 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
SMPDL3A-202ENST00000487215 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
SMPDL3A-202ENST00000487215 MP68P56378 58 aa8.01□□□□□ -1.13
SMPDL3A-202ENST00000487215 LINC00643Q86TS7 51 aa8.01□□□□□ -1.13
SMPDL3A-202ENST00000487215 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
SMPDL3A-202ENST00000487215 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
SMPDL3A-202ENST00000487215 A0A1B0GV90 55 aa7.97□□□□□ -1.13
SMPDL3A-202ENST00000487215 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
SMPDL3A-202ENST00000487215 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
SMPDL3A-202ENST00000487215 R4GN34 69 aa7.92□□□□□ -1.14
SMPDL3A-202ENST00000487215 OCR1Q9BZK8 76 aa7.91□□□□□ -1.14
SMPDL3A-202ENST00000487215 H3BPC8 53 aa7.87□□□□□ -1.15
SMPDL3A-202ENST00000487215 M0QZ58 72 aa7.82□□□□□ -1.16
SMPDL3A-202ENST00000487215 GPR98Q8WXG9 6306 aa7.81□□□□□ -1.16
SMPDL3A-202ENST00000487215 P0C880 135 aa7.81□□□□□ -1.16
SMPDL3A-202ENST00000487215 KRTAP10-7P60409 375 aaPredicted RBP7.81□□□□□ -1.16
SMPDL3A-202ENST00000487215 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
SMPDL3A-202ENST00000487215 J3QR89 54 aa7.77□□□□□ -1.17
SMPDL3A-202ENST00000487215 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
SMPDL3A-202ENST00000487215 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
SMPDL3A-202ENST00000487215 LINC01554Q52M75 96 aa7.71□□□□□ -1.18
SMPDL3A-202ENST00000487215 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
SMPDL3A-202ENST00000487215 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
SMPDL3A-202ENST00000487215 DSTQ03001 7570 aaKnown RBP7.64□□□□□ -1.19
SMPDL3A-202ENST00000487215 K7ERU9 68 aa7.64□□□□□ -1.19
SMPDL3A-202ENST00000487215 ACYP2P14621 99 aa7.63□□□□□ -1.19
SMPDL3A-202ENST00000487215 SPTSSBQ8NFR3 76 aa7.62□□□□□ -1.19
SMPDL3A-202ENST00000487215 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
SMPDL3A-202ENST00000487215 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
SMPDL3A-202ENST00000487215 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
SMPDL3A-202ENST00000487215 CHKB-CPT1BH3BT56 60 aa7.49□□□□□ -1.21
SMPDL3A-202ENST00000487215 KRTAP9-9Q9BYP9 154 aa7.49□□□□□ -1.21
SMPDL3A-202ENST00000487215 KRTAP9-4Q9BYQ2 154 aa7.49□□□□□ -1.21
SMPDL3A-202ENST00000487215 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
SMPDL3A-202ENST00000487215 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
SMPDL3A-202ENST00000487215 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
SMPDL3A-202ENST00000487215 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
SMPDL3A-202ENST00000487215 H3BS24 57 aa7.28□□□□□ -1.24
SMPDL3A-202ENST00000487215 MT1EP04732 61 aa7.28□□□□□ -1.24
SMPDL3A-202ENST00000487215 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
SMPDL3A-202ENST00000487215 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
SMPDL3A-202ENST00000487215 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
SMPDL3A-202ENST00000487215 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
SMPDL3A-202ENST00000487215 KRTAP13-4Q3LI77 160 aa7.18□□□□□ -1.26
SMPDL3A-202ENST00000487215 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
SMPDL3A-202ENST00000487215 MT4P47944 62 aa7.13□□□□□ -1.27
SMPDL3A-202ENST00000487215 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
SMPDL3A-202ENST00000487215 SEC61GP60059 68 aa7.12□□□□□ -1.27
SMPDL3A-202ENST00000487215 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
SMPDL3A-202ENST00000487215 AHNAK2Q8IVF2 5795 aa7.11□□□□□ -1.27
SMPDL3A-202ENST00000487215 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
SMPDL3A-202ENST00000487215 MT1GP13640 62 aa7.07□□□□□ -1.28
SMPDL3A-202ENST00000487215 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SMPDL3A-202ENST00000487215 COA5Q86WW8 74 aa7.05□□□□□ -1.28
SMPDL3A-202ENST00000487215 A0A0D9SG42 100 aa7.01□□□□□ -1.29
SMPDL3A-202ENST00000487215 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
SMPDL3A-202ENST00000487215 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
SMPDL3A-202ENST00000487215 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
SMPDL3A-202ENST00000487215 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
SMPDL3A-202ENST00000487215 MT1MQ8N339 61 aa6.97□□□□□ -1.29
SMPDL3A-202ENST00000487215 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
SMPDL3A-202ENST00000487215 A0A1B0GU33 70 aa6.94□□□□□ -1.3
SMPDL3A-202ENST00000487215 COX7CP15954 63 aa6.94□□□□□ -1.3
SMPDL3A-202ENST00000487215 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
SMPDL3A-202ENST00000487215 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms