RNA–Protein interactions for RNA: ENST00000487186.5

FAAP20-213, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 3,576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-213ENST00000487186 FAT2Q9NYQ8 4349 aa7.4□□□□□ -1.22
FAAP20-213ENST00000487186 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
FAAP20-213ENST00000487186 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
FAAP20-213ENST00000487186 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
FAAP20-213ENST00000487186 Q5VSD8 79 aa7.34□□□□□ -1.24
FAAP20-213ENST00000487186 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
FAAP20-213ENST00000487186 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
FAAP20-213ENST00000487186 KRTAP21-3Q3LHN1 58 aa7.28□□□□□ -1.24
FAAP20-213ENST00000487186 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
FAAP20-213ENST00000487186 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
FAAP20-213ENST00000487186 PKD1P98161 4303 aa7.23□□□□□ -1.25
FAAP20-213ENST00000487186 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
FAAP20-213ENST00000487186 RYR3Q15413 4870 aa7.16□□□□□ -1.26
FAAP20-213ENST00000487186 S4R3F8 94 aa7.15□□□□□ -1.26
FAAP20-213ENST00000487186 RYR2Q92736 4967 aa7.12□□□□□ -1.27
FAAP20-213ENST00000487186 RYR1P21817 5038 aa7.1□□□□□ -1.27
FAAP20-213ENST00000487186 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
FAAP20-213ENST00000487186 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
FAAP20-213ENST00000487186 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
FAAP20-213ENST00000487186 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
FAAP20-213ENST00000487186 J3QL48 77 aa7.01□□□□□ -1.29
FAAP20-213ENST00000487186 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
FAAP20-213ENST00000487186 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
FAAP20-213ENST00000487186 EPPK1P58107 5090 aaKnown RBP6.98□□□□□ -1.29
FAAP20-213ENST00000487186 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
FAAP20-213ENST00000487186 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
FAAP20-213ENST00000487186 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
FAAP20-213ENST00000487186 XP32Q5T750 250 aa6.89□□□□□ -1.31
FAAP20-213ENST00000487186 HSPG2P98160 4391 aa6.88□□□□□ -1.31
FAAP20-213ENST00000487186 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
FAAP20-213ENST00000487186 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
FAAP20-213ENST00000487186 LRP2P98164 4655 aa6.85□□□□□ -1.31
FAAP20-213ENST00000487186 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
FAAP20-213ENST00000487186 LPAP08519 4548 aa6.8□□□□□ -1.32
FAAP20-213ENST00000487186 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
FAAP20-213ENST00000487186 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
FAAP20-213ENST00000487186 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
FAAP20-213ENST00000487186 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
FAAP20-213ENST00000487186 MUC2Q02817 5179 aa6.68□□□□□ -1.34
FAAP20-213ENST00000487186 HERC2O95714 4834 aa6.67□□□□□ -1.34
FAAP20-213ENST00000487186 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
FAAP20-213ENST00000487186 M0QZ58 72 aa6.64□□□□□ -1.35
FAAP20-213ENST00000487186 TNXBP22105 4242 aa6.6□□□□□ -1.35
FAAP20-213ENST00000487186 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
FAAP20-213ENST00000487186 R4GN34 69 aa6.56□□□□□ -1.36
FAAP20-213ENST00000487186 HERC1Q15751 4861 aa6.53□□□□□ -1.36
FAAP20-213ENST00000487186 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
FAAP20-213ENST00000487186 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
FAAP20-213ENST00000487186 M0R2T5 61 aa6.42□□□□□ -1.38
FAAP20-213ENST00000487186 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
FAAP20-213ENST00000487186 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
FAAP20-213ENST00000487186 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
FAAP20-213ENST00000487186 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
FAAP20-213ENST00000487186 INE1O15225 51 aa6.26□□□□□ -1.41
FAAP20-213ENST00000487186 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
FAAP20-213ENST00000487186 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
FAAP20-213ENST00000487186 TNP1P09430 55 aa6.13□□□□□ -1.43
FAAP20-213ENST00000487186 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
FAAP20-213ENST00000487186 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
FAAP20-213ENST00000487186 MUC17Q685J3 4493 aa5.96□□□□□ -1.45
FAAP20-213ENST00000487186 KRTAP10-10P60014 251 aa5.96□□□□□ -1.45
FAAP20-213ENST00000487186 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
FAAP20-213ENST00000487186 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
FAAP20-213ENST00000487186 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
FAAP20-213ENST00000487186 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
FAAP20-213ENST00000487186 USH2AO75445 5202 aa5.72□□□□□ -1.49
FAAP20-213ENST00000487186 MT1HP80294 61 aa5.72□□□□□ -1.49
FAAP20-213ENST00000487186 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
FAAP20-213ENST00000487186 MT1FP04733 61 aa5.64□□□□□ -1.51
FAAP20-213ENST00000487186 MT2AP02795 61 aa5.6□□□□□ -1.51
FAAP20-213ENST00000487186 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
FAAP20-213ENST00000487186 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
FAAP20-213ENST00000487186 KMT2DO14686 5537 aa5.45□□□□□ -1.54
FAAP20-213ENST00000487186 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
FAAP20-213ENST00000487186 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.55
FAAP20-213ENST00000487186 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
FAAP20-213ENST00000487186 MT1BP07438 61 aa5.26□□□□□ -1.57
FAAP20-213ENST00000487186 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
FAAP20-213ENST00000487186 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
FAAP20-213ENST00000487186 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.57
FAAP20-213ENST00000487186 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
FAAP20-213ENST00000487186 MT1XP80297 61 aa5.2□□□□□ -1.58
FAAP20-213ENST00000487186 LCE2BO14633 110 aa5.18□□□□□ -1.58
FAAP20-213ENST00000487186 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
FAAP20-213ENST00000487186 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
FAAP20-213ENST00000487186 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
FAAP20-213ENST00000487186 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
FAAP20-213ENST00000487186 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
FAAP20-213ENST00000487186 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
FAAP20-213ENST00000487186 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
FAAP20-213ENST00000487186 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
FAAP20-213ENST00000487186 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
FAAP20-213ENST00000487186 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
FAAP20-213ENST00000487186 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
FAAP20-213ENST00000487186 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
FAAP20-213ENST00000487186 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.63
FAAP20-213ENST00000487186 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
FAAP20-213ENST00000487186 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
FAAP20-213ENST00000487186 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
FAAP20-213ENST00000487186 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms