RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SFTA2Q6UW10 78 aa1.4□□□□□ -2.19
PRPF38A-203ENST00000487160 PRO1933Q9H354 126 aa1.4□□□□□ -2.19
PRPF38A-203ENST00000487160 TRAV23DV6A0A075B6W5 121 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR2EP22531 72 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR2BP35325 72 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR2AP35326 72 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 MEIG1Q5JSS6 88 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 Q96NJ1 140 aa1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 NXT2Q9NPJ8 142 aaKnown RBP1.39□□□□□ -2.19
PRPF38A-203ENST00000487160 DNAL4O96015 105 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 S100A7L2Q5SY68 101 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 DEFB105AQ8NG35 78 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
PRPF38A-203ENST00000487160 CLLU1Q5K131 121 aa1.37□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR2FQ96RM1 72 aa1.37□□□□□ -2.19
PRPF38A-203ENST00000487160 TEX49A0A1B0GTD5 131 aa1.36□□□□□ -2.19
PRPF38A-203ENST00000487160 LINC01549A6NIU2 74 aa1.36□□□□□ -2.19
PRPF38A-203ENST00000487160 JMJD7-PLA2G4BH0Y9G9 81 aa1.36□□□□□ -2.19
PRPF38A-203ENST00000487160 LINC01546A6NGU7 62 aa1.35□□□□□ -2.19
PRPF38A-203ENST00000487160 MT1BP07438 61 aa1.35□□□□□ -2.19
PRPF38A-203ENST00000487160 PDE6GP18545 87 aa1.35□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR2DP22532 72 aa1.35□□□□□ -2.19
PRPF38A-203ENST00000487160 NPC2P61916 151 aa1.35□□□□□ -2.19
PRPF38A-203ENST00000487160 IGLV5-48A0A075B6I7 105 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 TRBV7-7A0A0K0K1E9 115 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 LINC00587B1AMM8 73 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 K7ERU9 68 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 ELOF1P60002 83 aaKnown RBP1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 VPS25Q9BRG1 176 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 SMCO4Q9NRQ5 59 aa1.34□□□□□ -2.19
PRPF38A-203ENST00000487160 MYMXA0A1B0GTQ4 84 aa1.33□□□□□ -2.2
PRPF38A-203ENST00000487160 J3QR89 54 aa1.33□□□□□ -2.2
PRPF38A-203ENST00000487160 COX7BP24311 80 aa1.33□□□□□ -2.2
PRPF38A-203ENST00000487160 PMCHL1Q16048 86 aa1.33□□□□□ -2.2
PRPF38A-203ENST00000487160 Q5VV11 94 aa1.33□□□□□ -2.2
PRPF38A-203ENST00000487160 F8WEM9 126 aa1.32□□□□□ -2.2
PRPF38A-203ENST00000487160 IGKCP01834 107 aa1.32□□□□□ -2.2
PRPF38A-203ENST00000487160 PEA15Q15121 130 aa1.31□□□□□ -2.2
PRPF38A-203ENST00000487160 OCIAD2Q56VL3 154 aa1.31□□□□□ -2.2
PRPF38A-203ENST00000487160 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
PRPF38A-203ENST00000487160 Q6JHZ5 121 aa1.3□□□□□ -2.2
PRPF38A-203ENST00000487160 SPANXDQ9BXN6 97 aa1.3□□□□□ -2.2
PRPF38A-203ENST00000487160 SPINK7P58062 85 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 SPATA45Q537H7 98 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 LINC00308Q8TCZ7 52 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 IFI27L1Q96BM0 104 aa1.29□□□□□ -2.2
PRPF38A-203ENST00000487160 TRAV13-2A0A0B4J235 113 aa1.28□□□□□ -2.2
PRPF38A-203ENST00000487160 A0A1B0GV90 55 aa1.28□□□□□ -2.2
PRPF38A-203ENST00000487160 ZNF815PA8K554 130 aa1.28□□□□□ -2.2
PRPF38A-203ENST00000487160 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
PRPF38A-203ENST00000487160 H3BUT2 72 aa1.27□□□□□ -2.21
PRPF38A-203ENST00000487160 Q6ZQY7 126 aa1.27□□□□□ -2.21
PRPF38A-203ENST00000487160 SEC11CQ9BY50 192 aa1.27□□□□□ -2.21
PRPF38A-203ENST00000487160 PLNP26678 52 aa1.26□□□□□ -2.21
PRPF38A-203ENST00000487160 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
PRPF38A-203ENST00000487160 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
PRPF38A-203ENST00000487160 S100PP25815 95 aa1.25□□□□□ -2.21
PRPF38A-203ENST00000487160 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
PRPF38A-203ENST00000487160 ATOH7Q8N100 152 aa1.25□□□□□ -2.21
PRPF38A-203ENST00000487160 PMCHL2Q9BQD1 86 aa1.25□□□□□ -2.21
PRPF38A-203ENST00000487160 hADV29S1A0JD25 119 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 LINC00575Q6W349 94 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 SMIM11BQ8TCY0 68 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 SNHG12Q9BXW3 62 aa1.24□□□□□ -2.21
PRPF38A-203ENST00000487160 LOC101927531A0A1B0GV80 90 aa1.23□□□□□ -2.21
PRPF38A-203ENST00000487160 PPDPFLQ8WWR9 84 aa1.23□□□□□ -2.21
PRPF38A-203ENST00000487160 DLEU1O43261 78 aa1.22□□□□□ -2.21
PRPF38A-203ENST00000487160 LEPROTL1O95214 131 aa1.22□□□□□ -2.21
PRPF38A-203ENST00000487160 C3orf79P0CE67 100 aa1.22□□□□□ -2.21
PRPF38A-203ENST00000487160 MT1XP80297 61 aa1.22□□□□□ -2.21
PRPF38A-203ENST00000487160 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
PRPF38A-203ENST00000487160 KLKP1Q107X0 134 aa1.21□□□□□ -2.22
PRPF38A-203ENST00000487160 MUSTN1Q8IVN3 82 aa1.21□□□□□ -2.22
PRPF38A-203ENST00000487160 LINC00208Q96KT6 92 aa1.21□□□□□ -2.22
PRPF38A-203ENST00000487160 LINC00472Q9H8W2 130 aa1.21□□□□□ -2.22
PRPF38A-203ENST00000487160 CCKP06307 115 aa1.2□□□□□ -2.22
PRPF38A-203ENST00000487160 IFITM1P13164 125 aa1.2□□□□□ -2.22
PRPF38A-203ENST00000487160 MT4P47944 62 aa1.2□□□□□ -2.22
PRPF38A-203ENST00000487160 COPS9Q8WXC6 57 aa1.2□□□□□ -2.22
PRPF38A-203ENST00000487160 DSCR8Q96T75 97 aa1.2□□□□□ -2.22
PRPF38A-203ENST00000487160 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
PRPF38A-203ENST00000487160 TMEM218A2RU14 115 aa1.19□□□□□ -2.22
PRPF38A-203ENST00000487160 C12orf57Q99622 126 aa1.19□□□□□ -2.22
PRPF38A-203ENST00000487160 TRBV7-4A0A0J9YYF1 115 aa1.18□□□□□ -2.22
PRPF38A-203ENST00000487160 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
PRPF38A-203ENST00000487160 BVES-AS1Q5T3Y7 98 aa1.18□□□□□ -2.22
PRPF38A-203ENST00000487160 S4R3F8 94 aa1.18□□□□□ -2.22
PRPF38A-203ENST00000487160 RBM3P98179 157 aaKnown RBP1.17□□□□□ -2.22
PRPF38A-203ENST00000487160 CRIPTQ9P021 101 aa1.17□□□□□ -2.22
PRPF38A-203ENST00000487160 SYS1-DBNDD2H3BUS1 97 aa1.16□□□□□ -2.22
PRPF38A-203ENST00000487160 NDUFB1O75438 58 aa1.14□□□□□ -2.23
PRPF38A-203ENST00000487160 SNCGO76070 127 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms