RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 H1FX-AS1Q4G0G2 97 aa9.2□□□□□ -0.94
TNXB-205ENST00000486148 COX6B2Q6YFQ2 88 aa9.2□□□□□ -0.94
TNXB-205ENST00000486148 TNXBP22105 4242 aa9.19□□□□□ -0.94
TNXB-205ENST00000486148 KRTAP10-8P60410 259 aa9.16□□□□□ -0.94
TNXB-205ENST00000486148 Q5VSD8 79 aa9.1□□□□□ -0.95
TNXB-205ENST00000486148 HSPG2P98160 4391 aa9.1□□□□□ -0.95
TNXB-205ENST00000486148 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
TNXB-205ENST00000486148 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
TNXB-205ENST00000486148 XP32Q5T750 250 aa9.03□□□□□ -0.96
TNXB-205ENST00000486148 MYCBP2O75592 4640 aa9.02□□□□□ -0.96
TNXB-205ENST00000486148 K7ERS5 55 aa9.02□□□□□ -0.97
TNXB-205ENST00000486148 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
TNXB-205ENST00000486148 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
TNXB-205ENST00000486148 RYR1P21817 5038 aa8.99□□□□□ -0.97
TNXB-205ENST00000486148 RYR3Q15413 4870 aa8.98□□□□□ -0.97
TNXB-205ENST00000486148 TPRXLQ17RH7 258 aa8.96□□□□□ -0.97
TNXB-205ENST00000486148 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
TNXB-205ENST00000486148 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
TNXB-205ENST00000486148 MT1HL1P0DM35 61 aa8.88□□□□□ -0.99
TNXB-205ENST00000486148 S4R3F8 94 aa8.88□□□□□ -0.99
TNXB-205ENST00000486148 KIAA1109Q2LD37 5005 aa8.88□□□□□ -0.99
TNXB-205ENST00000486148 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
TNXB-205ENST00000486148 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
TNXB-205ENST00000486148 NDUFAF8A1L188 74 aa8.85□□□□□ -0.99
TNXB-205ENST00000486148 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
TNXB-205ENST00000486148 KRTAP15-1Q3LI76 137 aa8.83□□□□□ -1
TNXB-205ENST00000486148 A0A0D9SG42 100 aa8.79□□□□□ -1
TNXB-205ENST00000486148 LPAP08519 4548 aa8.78□□□□□ -1
TNXB-205ENST00000486148 LRP2P98164 4655 aa8.73□□□□□ -1.01
TNXB-205ENST00000486148 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.02
TNXB-205ENST00000486148 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
TNXB-205ENST00000486148 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
TNXB-205ENST00000486148 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
TNXB-205ENST00000486148 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
TNXB-205ENST00000486148 M0QZ58 72 aa8.41□□□□□ -1.06
TNXB-205ENST00000486148 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
TNXB-205ENST00000486148 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
TNXB-205ENST00000486148 SEC61BP60468 96 aaKnown RBP8.31□□□□□ -1.08
TNXB-205ENST00000486148 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
TNXB-205ENST00000486148 R4GN34 69 aa8.24□□□□□ -1.09
TNXB-205ENST00000486148 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.09
TNXB-205ENST00000486148 J3QL48 77 aa8.19□□□□□ -1.1
TNXB-205ENST00000486148 HERC2O95714 4834 aa8.17□□□□□ -1.1
TNXB-205ENST00000486148 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
TNXB-205ENST00000486148 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.11
TNXB-205ENST00000486148 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
TNXB-205ENST00000486148 MUC2Q02817 5179 aa8□□□□□ -1.13
TNXB-205ENST00000486148 BIRC6Q9NR09 4857 aa7.92□□□□□ -1.14
TNXB-205ENST00000486148 FLGP20930 4061 aaPredicted RBP7.87□□□□□ -1.15
TNXB-205ENST00000486148 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
TNXB-205ENST00000486148 HERC1Q15751 4861 aa7.78□□□□□ -1.16
TNXB-205ENST00000486148 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
TNXB-205ENST00000486148 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
TNXB-205ENST00000486148 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
TNXB-205ENST00000486148 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
TNXB-205ENST00000486148 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
TNXB-205ENST00000486148 TNP1P09430 55 aa7.51□□□□□ -1.21
TNXB-205ENST00000486148 SPRR5A0A1B0GTR4 108 aa7.48□□□□□ -1.21
TNXB-205ENST00000486148 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
TNXB-205ENST00000486148 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
TNXB-205ENST00000486148 M0R2T5 61 aa7.44□□□□□ -1.22
TNXB-205ENST00000486148 MT1HP80294 61 aa7.43□□□□□ -1.22
TNXB-205ENST00000486148 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
TNXB-205ENST00000486148 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
TNXB-205ENST00000486148 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
TNXB-205ENST00000486148 MT1FP04733 61 aa7.33□□□□□ -1.24
TNXB-205ENST00000486148 MT2AP02795 61 aa7.32□□□□□ -1.24
TNXB-205ENST00000486148 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
TNXB-205ENST00000486148 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
TNXB-205ENST00000486148 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
TNXB-205ENST00000486148 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
TNXB-205ENST00000486148 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
TNXB-205ENST00000486148 MT1BP07438 61 aa7.08□□□□□ -1.28
TNXB-205ENST00000486148 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
TNXB-205ENST00000486148 MT1XP80297 61 aa7.03□□□□□ -1.28
TNXB-205ENST00000486148 INE1O15225 51 aa6.96□□□□□ -1.29
TNXB-205ENST00000486148 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
TNXB-205ENST00000486148 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
TNXB-205ENST00000486148 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
TNXB-205ENST00000486148 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
TNXB-205ENST00000486148 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
TNXB-205ENST00000486148 LCE2BO14633 110 aa6.7□□□□□ -1.34
TNXB-205ENST00000486148 USH2AO75445 5202 aa6.6□□□□□ -1.35
TNXB-205ENST00000486148 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
TNXB-205ENST00000486148 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
TNXB-205ENST00000486148 KMT2DO14686 5537 aa6.51□□□□□ -1.37
TNXB-205ENST00000486148 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
TNXB-205ENST00000486148 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
TNXB-205ENST00000486148 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
TNXB-205ENST00000486148 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
TNXB-205ENST00000486148 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
TNXB-205ENST00000486148 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
TNXB-205ENST00000486148 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
TNXB-205ENST00000486148 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.44
TNXB-205ENST00000486148 MT1EP04732 61 aa6.08□□□□□ -1.44
TNXB-205ENST00000486148 MT1LQ93083 61 aa6.07□□□□□ -1.44
TNXB-205ENST00000486148 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.44
TNXB-205ENST00000486148 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.44
TNXB-205ENST00000486148 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.44
TNXB-205ENST00000486148 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms