RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 SMR3BP02814 79 aaPredicted RBP0.14□□□□□ -2.39
SGIP1-211ENST00000484988 HTN1P15515 57 aa0.14□□□□□ -2.39
SGIP1-211ENST00000484988 KRTAP19-7Q3SYF9 63 aa0.14□□□□□ -2.39
SGIP1-211ENST00000484988 LAMA1P25391 3075 aa0.14□□□□□ -2.39
SGIP1-211ENST00000484988 COL12A1Q99715 3063 aa0.14□□□□□ -2.39
SGIP1-211ENST00000484988 KMT2DO14686 5537 aa0.13□□□□□ -2.39
SGIP1-211ENST00000484988 RHPN1-AS1Q9BWJ2 59 aa0.13□□□□□ -2.39
SGIP1-211ENST00000484988 SPTAN1Q13813 2472 aaKnown RBP0.13□□□□□ -2.39
SGIP1-211ENST00000484988 KRTAP8-1Q8IUC2 63 aa0.12□□□□□ -2.39
SGIP1-211ENST00000484988 FLGP20930 4061 aaPredicted RBP0.12□□□□□ -2.39
SGIP1-211ENST00000484988 DOPEY1Q5JWR5 2465 aa0.12□□□□□ -2.39
SGIP1-211ENST00000484988 WDR87Q6ZQQ6 2873 aa0.12□□□□□ -2.39
SGIP1-211ENST00000484988 PKD1P98161 4303 aa0.11□□□□□ -2.39
SGIP1-211ENST00000484988 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
SGIP1-211ENST00000484988 KRTAP19-8Q3LI54 63 aa0.1□□□□□ -2.39
SGIP1-211ENST00000484988 DNAH9Q9NYC9 4486 aa0.1□□□□□ -2.39
SGIP1-211ENST00000484988 USP9YO00507 2555 aaPredicted RBP0.1□□□□□ -2.39
SGIP1-211ENST00000484988 GCC2Q8IWJ2 1684 aa0.09□□□□□ -2.39
SGIP1-211ENST00000484988 PRCDQ00LT1 54 aa0.09□□□□□ -2.4
SGIP1-211ENST00000484988 SACSQ9NZJ4 4579 aa0.09□□□□□ -2.4
SGIP1-211ENST00000484988 LAMA5O15230 3695 aa0.09□□□□□ -2.4
SGIP1-211ENST00000484988 CHD7Q9P2D1 2997 aa0.09□□□□□ -2.4
SGIP1-211ENST00000484988 AKAP9Q99996 3911 aa0.08□□□□□ -2.4
SGIP1-211ENST00000484988 LRP1BQ9NZR2 4599 aa0.08□□□□□ -2.4
SGIP1-211ENST00000484988 LRP2P98164 4655 aa0.08□□□□□ -2.4
SGIP1-211ENST00000484988 CELSR3Q9NYQ7 3312 aa0.08□□□□□ -2.4
SGIP1-211ENST00000484988 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
SGIP1-211ENST00000484988 HTTP42858 3142 aa0.07□□□□□ -2.4
SGIP1-211ENST00000484988 KRTAP19-5Q3LI72 72 aa0.07□□□□□ -2.4
SGIP1-211ENST00000484988 ITPR1Q14643 2758 aa0.07□□□□□ -2.4
SGIP1-211ENST00000484988 PKHD1L1Q86WI1 4243 aa0.07□□□□□ -2.4
SGIP1-211ENST00000484988 ADGRG4Q8IZF6 3080 aa0.06□□□□□ -2.4
SGIP1-211ENST00000484988 DEFB4AO15263 64 aa0.06□□□□□ -2.4
SGIP1-211ENST00000484988 DEFB136Q30KP8 78 aa0.06□□□□□ -2.4
SGIP1-211ENST00000484988 TRIOO75962 3097 aa0.06□□□□□ -2.4
SGIP1-211ENST00000484988 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
SGIP1-211ENST00000484988 ITPR3Q14573 2671 aa0.05□□□□□ -2.4
SGIP1-211ENST00000484988 ANK3Q12955 4377 aaKnown RBP0.05□□□□□ -2.4
SGIP1-211ENST00000484988 RANBP2P49792 3224 aaKnown RBP0.04□□□□□ -2.4
SGIP1-211ENST00000484988 CRYBG3Q68DQ2 2970 aa0.04□□□□□ -2.4
SGIP1-211ENST00000484988 K7EIM0 57 aa0.04□□□□□ -2.4
SGIP1-211ENST00000484988 DEFB133Q30KQ1 61 aa0.04□□□□□ -2.4
SGIP1-211ENST00000484988 NBPF19A0A087WUL8 3843 aa0.03□□□□□ -2.4
SGIP1-211ENST00000484988 DNAH3Q8TD57 4116 aa0.03□□□□□ -2.4
SGIP1-211ENST00000484988 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
SGIP1-211ENST00000484988 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.41
SGIP1-211ENST00000484988 PCLOQ9Y6V0 5065 aa0.02□□□□□ -2.41
SGIP1-211ENST00000484988 DEFB108AA8MXU0 73 aa0.02□□□□□ -2.41
SGIP1-211ENST00000484988 SPENQ96T58 3664 aaKnown RBP0.02□□□□□ -2.41
SGIP1-211ENST00000484988 CFAP46Q8IYW2 2715 aa0.01□□□□□ -2.41
SGIP1-211ENST00000484988 GPR98Q8WXG9 6306 aa0.01□□□□□ -2.41
SGIP1-211ENST00000484988 DYNC2H1Q8NCM8 4307 aaKnown RBP0.01□□□□□ -2.41
SGIP1-211ENST00000484988 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
SGIP1-211ENST00000484988 MUC2Q02817 5179 aa0□□□□□ -2.41
SGIP1-211ENST00000484988 MT1HP80294 61 aa0□□□□□ -2.41
SGIP1-211ENST00000484988 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
SGIP1-211ENST00000484988 DNAH11Q96DT5 4516 aa0□□□□□ -2.41
SGIP1-211ENST00000484988 SPTBN5Q9NRC6 3674 aaKnown RBP0□□□□□ -2.41
SGIP1-211ENST00000484988 MUC12Q9UKN1 5478 aa-0□□□□□ -2.41
SGIP1-211ENST00000484988 DNAH6Q9C0G6 4158 aa-0□□□□□ -2.41
SGIP1-211ENST00000484988 APELAP0DMC3 54 aa-0.01□□□□□ -2.41
SGIP1-211ENST00000484988 RPL39P5Q59GN2 51 aa-0.01□□□□□ -2.41
SGIP1-211ENST00000484988 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
SGIP1-211ENST00000484988 DNAH1Q9P2D7 4330 aa-0.02□□□□□ -2.41
SGIP1-211ENST00000484988 TEX15Q9BXT5 2789 aa-0.02□□□□□ -2.41
SGIP1-211ENST00000484988 FSIP2Q5CZC0 6907 aa-0.02□□□□□ -2.41
SGIP1-211ENST00000484988 TMEM167AQ8TBQ9 72 aa-0.02□□□□□ -2.41
SGIP1-211ENST00000484988 ZFHX4Q86UP3 3567 aa-0.02□□□□□ -2.41
SGIP1-211ENST00000484988 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
SGIP1-211ENST00000484988 C5orf42Q9H799 3197 aa-0.03□□□□□ -2.41
SGIP1-211ENST00000484988 SSPOA2VEC9 5147 aa-0.03□□□□□ -2.41
SGIP1-211ENST00000484988 LRBAP50851 2863 aa-0.03□□□□□ -2.41
SGIP1-211ENST00000484988 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.42
SGIP1-211ENST00000484988 DNAH8Q96JB1 4490 aa-0.04□□□□□ -2.42
SGIP1-211ENST00000484988 MGAQ8IWI9 3026 aa-0.05□□□□□ -2.42
SGIP1-211ENST00000484988 CEP250Q9BV73 2442 aa-0.05□□□□□ -2.42
SGIP1-211ENST00000484988 FAT1Q14517 4588 aa-0.05□□□□□ -2.42
SGIP1-211ENST00000484988 DNAH7Q8WXX0 4024 aa-0.05□□□□□ -2.42
SGIP1-211ENST00000484988 SRCAPQ6ZRS2 3230 aa-0.05□□□□□ -2.42
SGIP1-211ENST00000484988 H3BUX3 64 aa-0.06□□□□□ -2.42
SGIP1-211ENST00000484988 CD52P31358 61 aa-0.06□□□□□ -2.42
SGIP1-211ENST00000484988 TLN1Q9Y490 2541 aaKnown RBP-0.06□□□□□ -2.42
SGIP1-211ENST00000484988 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
SGIP1-211ENST00000484988 MT1EP04732 61 aa-0.07□□□□□ -2.42
SGIP1-211ENST00000484988 LAMA2P24043 3122 aaKnown RBP-0.07□□□□□ -2.42
SGIP1-211ENST00000484988 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
SGIP1-211ENST00000484988 A0A096LPF7 62 aa-0.08□□□□□ -2.42
SGIP1-211ENST00000484988 MT1GP13640 62 aa-0.08□□□□□ -2.42
SGIP1-211ENST00000484988 MT1XP80297 61 aa-0.08□□□□□ -2.42
SGIP1-211ENST00000484988 MT1LQ93083 61 aa-0.08□□□□□ -2.42
SGIP1-211ENST00000484988 MACF1Q9UPN3 7388 aaKnown RBP-0.09□□□□□ -2.42
SGIP1-211ENST00000484988 HERC1Q15751 4861 aa-0.09□□□□□ -2.42
SGIP1-211ENST00000484988 STARD9Q9P2P6 4700 aa-0.09□□□□□ -2.42
SGIP1-211ENST00000484988 MT4P47944 62 aa-0.09□□□□□ -2.42
SGIP1-211ENST00000484988 CSMD1Q96PZ7 3565 aa-0.09□□□□□ -2.42
SGIP1-211ENST00000484988 DMXL2Q8TDJ6 3036 aa-0.12□□□□□ -2.43
SGIP1-211ENST00000484988 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
SGIP1-211ENST00000484988 LINC01556Q5JQF7 62 aa-0.12□□□□□ -2.43
SGIP1-211ENST00000484988 DEFB124Q8NES8 71 aa-0.12□□□□□ -2.43
SGIP1-211ENST00000484988 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms