RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 FAT2Q9NYQ8 4349 aa4.71□□□□□ -1.66
TMEM248-206ENST00000484751 C9orf92A6NGG3 77 aa4.7□□□□□ -1.66
TMEM248-206ENST00000484751 Q8N1X5 172 aa4.7□□□□□ -1.66
TMEM248-206ENST00000484751 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
TMEM248-206ENST00000484751 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
TMEM248-206ENST00000484751 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
TMEM248-206ENST00000484751 SACSQ9NZJ4 4579 aa4.65□□□□□ -1.66
TMEM248-206ENST00000484751 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
TMEM248-206ENST00000484751 RBM12B-AS1Q9P1G2 102 aa4.63□□□□□ -1.67
TMEM248-206ENST00000484751 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
TMEM248-206ENST00000484751 A0A1B0GU33 70 aa4.59□□□□□ -1.67
TMEM248-206ENST00000484751 K7ERS5 55 aa4.59□□□□□ -1.67
TMEM248-206ENST00000484751 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
TMEM248-206ENST00000484751 Q5VSD8 79 aa4.58□□□□□ -1.68
TMEM248-206ENST00000484751 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
TMEM248-206ENST00000484751 RPL37P61927 97 aaKnown RBP4.57□□□□□ -1.68
TMEM248-206ENST00000484751 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
TMEM248-206ENST00000484751 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
TMEM248-206ENST00000484751 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
TMEM248-206ENST00000484751 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
TMEM248-206ENST00000484751 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
TMEM248-206ENST00000484751 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
TMEM248-206ENST00000484751 H0YAA0 97 aa4.51□□□□□ -1.69
TMEM248-206ENST00000484751 S4R3F8 94 aa4.49□□□□□ -1.69
TMEM248-206ENST00000484751 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
TMEM248-206ENST00000484751 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
TMEM248-206ENST00000484751 FLG2Q5D862 2391 aaPredicted RBP4.46□□□□□ -1.7
TMEM248-206ENST00000484751 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
TMEM248-206ENST00000484751 FAT1Q14517 4588 aa4.43□□□□□ -1.7
TMEM248-206ENST00000484751 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
TMEM248-206ENST00000484751 RYR2Q92736 4967 aa4.43□□□□□ -1.7
TMEM248-206ENST00000484751 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
TMEM248-206ENST00000484751 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
TMEM248-206ENST00000484751 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
TMEM248-206ENST00000484751 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
TMEM248-206ENST00000484751 FAT3Q8TDW7 4589 aa4.37□□□□□ -1.71
TMEM248-206ENST00000484751 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
TMEM248-206ENST00000484751 ROMO1P60602 79 aa4.36□□□□□ -1.71
TMEM248-206ENST00000484751 TNXBP22105 4242 aa4.35□□□□□ -1.71
TMEM248-206ENST00000484751 RYR3Q15413 4870 aa4.33□□□□□ -1.72
TMEM248-206ENST00000484751 M0QZ58 72 aa4.31□□□□□ -1.72
TMEM248-206ENST00000484751 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
TMEM248-206ENST00000484751 KMT2CQ8NEZ4 4911 aaKnown RBP4.31□□□□□ -1.72
TMEM248-206ENST00000484751 HSPG2P98160 4391 aa4.3□□□□□ -1.72
TMEM248-206ENST00000484751 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
TMEM248-206ENST00000484751 A0A0D9SG42 100 aa4.29□□□□□ -1.72
TMEM248-206ENST00000484751 RYR1P21817 5038 aa4.27□□□□□ -1.73
TMEM248-206ENST00000484751 P0C880 135 aa4.26□□□□□ -1.73
TMEM248-206ENST00000484751 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
TMEM248-206ENST00000484751 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
TMEM248-206ENST00000484751 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
TMEM248-206ENST00000484751 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
TMEM248-206ENST00000484751 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
TMEM248-206ENST00000484751 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
TMEM248-206ENST00000484751 EPPK1P58107 5090 aaKnown RBP4.19□□□□□ -1.74
TMEM248-206ENST00000484751 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
TMEM248-206ENST00000484751 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
TMEM248-206ENST00000484751 R4GN34 69 aa4.16□□□□□ -1.74
TMEM248-206ENST00000484751 MYCBP2O75592 4640 aa4.15□□□□□ -1.74
TMEM248-206ENST00000484751 H3BS24 57 aa4.12□□□□□ -1.75
TMEM248-206ENST00000484751 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.75
TMEM248-206ENST00000484751 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
TMEM248-206ENST00000484751 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
TMEM248-206ENST00000484751 LRP2P98164 4655 aa4□□□□□ -1.77
TMEM248-206ENST00000484751 HERC2O95714 4834 aa3.98□□□□□ -1.77
TMEM248-206ENST00000484751 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
TMEM248-206ENST00000484751 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
TMEM248-206ENST00000484751 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
TMEM248-206ENST00000484751 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
TMEM248-206ENST00000484751 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
TMEM248-206ENST00000484751 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
TMEM248-206ENST00000484751 LPAP08519 4548 aa3.91□□□□□ -1.78
TMEM248-206ENST00000484751 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
TMEM248-206ENST00000484751 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
TMEM248-206ENST00000484751 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
TMEM248-206ENST00000484751 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
TMEM248-206ENST00000484751 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
TMEM248-206ENST00000484751 TNP1P09430 55 aa3.84□□□□□ -1.79
TMEM248-206ENST00000484751 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
TMEM248-206ENST00000484751 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
TMEM248-206ENST00000484751 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
TMEM248-206ENST00000484751 M0R2T5 61 aa3.76□□□□□ -1.81
TMEM248-206ENST00000484751 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
TMEM248-206ENST00000484751 HERC1Q15751 4861 aa3.76□□□□□ -1.81
TMEM248-206ENST00000484751 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
TMEM248-206ENST00000484751 MT1HP80294 61 aa3.67□□□□□ -1.82
TMEM248-206ENST00000484751 KRTAP10-10P60014 251 aa3.66□□□□□ -1.82
TMEM248-206ENST00000484751 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
TMEM248-206ENST00000484751 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TMEM248-206ENST00000484751 MT2AP02795 61 aa3.61□□□□□ -1.83
TMEM248-206ENST00000484751 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
TMEM248-206ENST00000484751 MT1FP04733 61 aa3.58□□□□□ -1.84
TMEM248-206ENST00000484751 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
TMEM248-206ENST00000484751 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
TMEM248-206ENST00000484751 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
TMEM248-206ENST00000484751 MUC2Q02817 5179 aa3.5□□□□□ -1.85
TMEM248-206ENST00000484751 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
TMEM248-206ENST00000484751 MT1BP07438 61 aa3.47□□□□□ -1.85
TMEM248-206ENST00000484751 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
TMEM248-206ENST00000484751 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms