RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
MDH1-211ENST00000484538 COL6A3P12111 3177 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
MDH1-211ENST00000484538 DCHS2Q6V1P9 2916 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 GCN1Q92616 2671 aaKnown RBP0.44□□□□□ -2.34
MDH1-211ENST00000484538 TACC2O95359 2948 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 USP9YO00507 2555 aaPredicted RBP0.44□□□□□ -2.34
MDH1-211ENST00000484538 STAB1Q9NY15 2570 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 MTORP42345 2549 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 DMXL2Q8TDJ6 3036 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 DMDP11532 3685 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 DNAH17Q9UFH2 4485 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 CSMD1Q96PZ7 3565 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 ATMQ13315 3056 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 LPAP08519 4548 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
MDH1-211ENST00000484538 SMG1Q96Q15 3661 aaKnown RBP0.43□□□□□ -2.34
MDH1-211ENST00000484538 Q9Y3F1 56 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 MUC3AQ02505 3323 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 ZZEF1O43149 2961 aa0.43□□□□□ -2.34
MDH1-211ENST00000484538 SETXQ7Z333 2677 aaKnown RBP0.42□□□□□ -2.34
MDH1-211ENST00000484538 ANKHD1Q8IWZ3 2542 aaKnown RBP0.42□□□□□ -2.34
MDH1-211ENST00000484538 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
MDH1-211ENST00000484538 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
MDH1-211ENST00000484538 HTTP42858 3142 aa0.42□□□□□ -2.34
MDH1-211ENST00000484538 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
MDH1-211ENST00000484538 DEFB108BQ8NET1 73 aa0.42□□□□□ -2.34
MDH1-211ENST00000484538 LRRK2Q5S007 2527 aa0.42□□□□□ -2.34
MDH1-211ENST00000484538 FLGP20930 4061 aaPredicted RBP0.42□□□□□ -2.34
MDH1-211ENST00000484538 FAT1Q14517 4588 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 XIRP2A4UGR9 3374 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 SVEP1Q4LDE5 3571 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 ACANP16112 2415 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 C5orf42Q9H799 3197 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 PRUNE2Q8WUY3 3088 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 ITPR3Q14573 2671 aa0.41□□□□□ -2.34
MDH1-211ENST00000484538 TRRAPQ9Y4A5 3859 aa0.4□□□□□ -2.34
MDH1-211ENST00000484538 CACNA1AO00555 2505 aa0.4□□□□□ -2.34
MDH1-211ENST00000484538 DYNC1H1Q14204 4646 aaKnown RBP0.4□□□□□ -2.35
MDH1-211ENST00000484538 SPRR2DP22532 72 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 DEFB133Q30KQ1 61 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 FLNBO75369 2602 aaKnown RBP0.4□□□□□ -2.35
MDH1-211ENST00000484538 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 FREM2Q5SZK8 3169 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 NIPBLQ6KC79 2804 aaeCLIP0.4□□□□□ -2.351e-5■■■■□ 22.3
MDH1-211ENST00000484538 CEP350Q5VT06 3117 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 ANKRD11Q6UB99 2663 aaPredicted RBP0.4□□□□□ -2.35
MDH1-211ENST00000484538 SRCAPQ6ZRS2 3230 aa0.4□□□□□ -2.35
MDH1-211ENST00000484538 MAST4O15021 2626 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 SPEGQ15772 3267 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 DCHS1Q96JQ0 3298 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 MT1AP04731 61 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 SPRR2BP35325 72 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 DNAH5Q8TE73 4624 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 TEX15Q9BXT5 2789 aa0.39□□□□□ -2.35
MDH1-211ENST00000484538 GOLGB1Q14789 3259 aaKnown RBP0.39□□□□□ -2.35
MDH1-211ENST00000484538 SONP18583 2426 aaKnown RBP0.38□□□□□ -2.35
MDH1-211ENST00000484538 SPG11Q96JI7 2443 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
MDH1-211ENST00000484538 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 MUC17Q685J3 4493 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 KALRNO60229 2985 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 NBEAL2Q6ZNJ1 2754 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 ACACBO00763 2458 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 A0A096LPF7 62 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 SMR3BP02814 79 aaPredicted RBP0.38□□□□□ -2.35
MDH1-211ENST00000484538 SPRR2AP35326 72 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 NBEAQ8NFP9 2946 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 DNAH12Q6ZR08 3092 aa0.38□□□□□ -2.35
MDH1-211ENST00000484538 WDFY4Q6ZS81 3184 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 BOD1L1Q8NFC6 3051 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 VPS13CQ709C8 3753 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 ASPMQ8IZT6 3477 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 KRTAP19-5Q3LI72 72 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 UTRNP46939 3433 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 LAMA3Q16787 3333 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 MYO18BQ8IUG5 2567 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 VPS13AQ96RL7 3174 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 USP34Q70CQ2 3546 aa0.37□□□□□ -2.35
MDH1-211ENST00000484538 TEP1Q99973 2627 aaKnown RBP0.36□□□□□ -2.35
MDH1-211ENST00000484538 WDR87Q6ZQQ6 2873 aa0.36□□□□□ -2.35
MDH1-211ENST00000484538 FASNP49327 2511 aaKnown RBP0.36□□□□□ -2.35
MDH1-211ENST00000484538 ITPR1Q14643 2758 aa0.36□□□□□ -2.35
MDH1-211ENST00000484538 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
MDH1-211ENST00000484538 USP9XQ93008 2570 aaPredicted RBP0.36□□□□□ -2.35
MDH1-211ENST00000484538 CSMD2Q7Z408 3487 aa0.36□□□□□ -2.35
MDH1-211ENST00000484538 CFAP47Q6ZTR5 3102 aa0.35□□□□□ -2.35
MDH1-211ENST00000484538 LRBAP50851 2863 aa0.35□□□□□ -2.35
MDH1-211ENST00000484538 TLN2Q9Y4G6 2542 aa0.35□□□□□ -2.35
MDH1-211ENST00000484538 CD52P31358 61 aa0.35□□□□□ -2.35
MDH1-211ENST00000484538 NBEAL1Q6ZS30 2694 aa0.35□□□□□ -2.35
MDH1-211ENST00000484538 ITPR2Q14571 2701 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 265.4 ms