RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
SEMA3D-204ENST00000484038 IMUPQ9GZP8 106 aa2.96□□□□□ -1.94
SEMA3D-204ENST00000484038 RBM12B-AS1Q9P1G2 102 aa2.96□□□□□ -1.94
SEMA3D-204ENST00000484038 A0A087WVE0 104 aa2.95□□□□□ -1.94
SEMA3D-204ENST00000484038 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
SEMA3D-204ENST00000484038 H3BQ85 93 aa2.94□□□□□ -1.94
SEMA3D-204ENST00000484038 HIST1H4AP62805 103 aaKnown RBP2.94□□□□□ -1.94
SEMA3D-204ENST00000484038 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SEMA3D-204ENST00000484038 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
SEMA3D-204ENST00000484038 TRBV7-4A0A0J9YYF1 115 aa2.93□□□□□ -1.94
SEMA3D-204ENST00000484038 CXCL6P80162 114 aa2.93□□□□□ -1.94
SEMA3D-204ENST00000484038 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
SEMA3D-204ENST00000484038 HRES1P13985 223 aa2.92□□□□□ -1.94
SEMA3D-204ENST00000484038 PDE6GP18545 87 aa2.92□□□□□ -1.94
SEMA3D-204ENST00000484038 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
SEMA3D-204ENST00000484038 ATOX1O00244 68 aa2.91□□□□□ -1.94
SEMA3D-204ENST00000484038 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
SEMA3D-204ENST00000484038 ATP5EP2Q5VTU8 51 aa2.91□□□□□ -1.94
SEMA3D-204ENST00000484038 A0A087WSZ3 146 aa2.9□□□□□ -1.95
SEMA3D-204ENST00000484038 COX7CP15954 63 aa2.89□□□□□ -1.95
SEMA3D-204ENST00000484038 A0A1W2PNM2 257 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 UQCRQO14949 82 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 LINC00313P59037 77 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 Q8N9L7 120 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 BPY2O14599 106 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 NREPQ16612 68 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 CYSTM1Q9H1C7 97 aa2.88□□□□□ -1.95
SEMA3D-204ENST00000484038 A8MWP4 228 aa2.86□□□□□ -1.95
SEMA3D-204ENST00000484038 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
SEMA3D-204ENST00000484038 NEBP20929 6669 aa2.86□□□□□ -1.95
SEMA3D-204ENST00000484038 TMEM258P61165 79 aa2.84□□□□□ -1.95
SEMA3D-204ENST00000484038 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
SEMA3D-204ENST00000484038 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
SEMA3D-204ENST00000484038 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
SEMA3D-204ENST00000484038 IGHV6-1A0A0B4J1U7 121 aa2.83□□□□□ -1.96
SEMA3D-204ENST00000484038 C20orf197Q8N268 126 aa2.83□□□□□ -1.96
SEMA3D-204ENST00000484038 SPINK7P58062 85 aa2.83□□□□□ -1.96
SEMA3D-204ENST00000484038 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 A0A1B0GW54 56 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 C8orf87E5RJ46 101 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 K7EQZ3 153 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 WFDC13Q8IUB5 93 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 PRR15Q8IV56 129 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 SNURFQ9Y675 71 aa2.82□□□□□ -1.96
SEMA3D-204ENST00000484038 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
SEMA3D-204ENST00000484038 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
SEMA3D-204ENST00000484038 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
SEMA3D-204ENST00000484038 A0A1B0GVX0 72 aa2.78□□□□□ -1.96
SEMA3D-204ENST00000484038 A6NN06 94 aa2.78□□□□□ -1.96
SEMA3D-204ENST00000484038 LINC00472Q9H8W2 130 aa2.78□□□□□ -1.96
SEMA3D-204ENST00000484038 HCG22E2RYF7 251 aa2.78□□□□□ -1.97
SEMA3D-204ENST00000484038 H7BZZ5 65 aa2.78□□□□□ -1.97
SEMA3D-204ENST00000484038 KLKP1Q107X0 134 aa2.78□□□□□ -1.97
SEMA3D-204ENST00000484038 TMEM254Q8TBM7 123 aa2.77□□□□□ -1.97
SEMA3D-204ENST00000484038 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
SEMA3D-204ENST00000484038 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
SEMA3D-204ENST00000484038 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
SEMA3D-204ENST00000484038 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
SEMA3D-204ENST00000484038 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
SEMA3D-204ENST00000484038 CASC2Q6XLA1 102 aa2.74□□□□□ -1.97
SEMA3D-204ENST00000484038 SERP1Q9Y6X1 66 aa2.74□□□□□ -1.97
SEMA3D-204ENST00000484038 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
SEMA3D-204ENST00000484038 NDUFC1O43677 76 aa2.73□□□□□ -1.97
SEMA3D-204ENST00000484038 NDUFS5O43920 106 aa2.73□□□□□ -1.97
SEMA3D-204ENST00000484038 Q5VV11 94 aa2.72□□□□□ -1.97
SEMA3D-204ENST00000484038 KMT2DO14686 5537 aa2.72□□□□□ -1.97
SEMA3D-204ENST00000484038 H0Y9P7 68 aa2.71□□□□□ -1.98
SEMA3D-204ENST00000484038 NDUFB1O75438 58 aa2.71□□□□□ -1.98
SEMA3D-204ENST00000484038 MT1BP07438 61 aa2.71□□□□□ -1.98
SEMA3D-204ENST00000484038 C8orf17Q9NRJ1 99 aa2.71□□□□□ -1.98
SEMA3D-204ENST00000484038 hDV103S1A0JD37 113 aa2.7□□□□□ -1.98
SEMA3D-204ENST00000484038 ATP5EP56381 51 aaPredicted RBP2.7□□□□□ -1.98
SEMA3D-204ENST00000484038 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
SEMA3D-204ENST00000484038 A8MUN3 132 aa2.69□□□□□ -1.98
SEMA3D-204ENST00000484038 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
SEMA3D-204ENST00000484038 MP68P56378 58 aa2.69□□□□□ -1.98
SEMA3D-204ENST00000484038 LCA10Q71F78 164 aa2.69□□□□□ -1.98
SEMA3D-204ENST00000484038 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
SEMA3D-204ENST00000484038 TRAV22A0A0B4J277 110 aa2.68□□□□□ -1.98
SEMA3D-204ENST00000484038 PSPHP1O15172 72 aa2.68□□□□□ -1.98
SEMA3D-204ENST00000484038 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
SEMA3D-204ENST00000484038 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
SEMA3D-204ENST00000484038 C1orf64Q8NEQ6 169 aa2.67□□□□□ -1.98
SEMA3D-204ENST00000484038 H3BPC8 53 aa2.66□□□□□ -1.98
SEMA3D-204ENST00000484038 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
SEMA3D-204ENST00000484038 C7orf65Q6ZTY9 151 aa2.65□□□□□ -1.99
SEMA3D-204ENST00000484038 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
SEMA3D-204ENST00000484038 TP53AIP1Q9HCN2 124 aa2.65□□□□□ -1.99
SEMA3D-204ENST00000484038 SPRR2EP22531 72 aa2.64□□□□□ -1.99
SEMA3D-204ENST00000484038 SPRR2BP35325 72 aa2.64□□□□□ -1.99
SEMA3D-204ENST00000484038 SPRR2AP35326 72 aa2.64□□□□□ -1.99
SEMA3D-204ENST00000484038 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
SEMA3D-204ENST00000484038 Q5W150 140 aa2.63□□□□□ -1.99
SEMA3D-204ENST00000484038 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
SEMA3D-204ENST00000484038 SPANXA2-OT1Q8N9U9 137 aa2.63□□□□□ -1.99
SEMA3D-204ENST00000484038 S4R3F8 94 aa2.62□□□□□ -1.99
SEMA3D-204ENST00000484038 LINC01554Q52M75 96 aa2.61□□□□□ -1.99
SEMA3D-204ENST00000484038 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms