RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 SPRR2DP22532 72 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 LRBAP50851 2863 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 LYSTQ99698 3801 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
COMMD3-213ENST00000483684 CFAP54Q96N23 3096 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 HSPG2P98160 4391 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 SPRR2AP35326 72 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 FAT3Q8TDW7 4589 aa0.6□□□□□ -2.31
COMMD3-213ENST00000483684 NIPBLQ6KC79 2804 aaeCLIP0.6□□□□□ -2.31
COMMD3-213ENST00000483684 AKAP9Q99996 3911 aa0.59□□□□□ -2.31
COMMD3-213ENST00000483684 TLN2Q9Y4G6 2542 aa0.59□□□□□ -2.31
COMMD3-213ENST00000483684 TRIOO75962 3097 aa0.59□□□□□ -2.32
COMMD3-213ENST00000483684 TEX15Q9BXT5 2789 aa0.59□□□□□ -2.32
COMMD3-213ENST00000483684 DMXL1Q9Y485 3027 aa0.59□□□□□ -2.32
COMMD3-213ENST00000483684 APOBP04114 4563 aaKnown RBP0.59□□□□□ -2.32
COMMD3-213ENST00000483684 ZFHX4Q86UP3 3567 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH9Q9NYC9 4486 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 DMXL2Q8TDJ6 3036 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 SRCAPQ6ZRS2 3230 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 SPENQ96T58 3664 aaKnown RBP0.58□□□□□ -2.32
COMMD3-213ENST00000483684 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 ZZEF1O43149 2961 aa0.58□□□□□ -2.32
COMMD3-213ENST00000483684 SPTAN1Q13813 2472 aaKnown RBP0.58□□□□□ -2.32
COMMD3-213ENST00000483684 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
COMMD3-213ENST00000483684 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
COMMD3-213ENST00000483684 PLECQ15149 4684 aaKnown RBP0.57□□□□□ -2.32
COMMD3-213ENST00000483684 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
COMMD3-213ENST00000483684 FLNAP21333 2647 aaKnown RBP0.57□□□□□ -2.32
COMMD3-213ENST00000483684 ATMQ13315 3056 aa0.57□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH17Q9UFH2 4485 aa0.57□□□□□ -2.32
COMMD3-213ENST00000483684 C5orf42Q9H799 3197 aa0.57□□□□□ -2.32
COMMD3-213ENST00000483684 PKD1P98161 4303 aa0.57□□□□□ -2.32
COMMD3-213ENST00000483684 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 USP9XQ93008 2570 aaPredicted RBP0.56□□□□□ -2.32
COMMD3-213ENST00000483684 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 HTTP42858 3142 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
COMMD3-213ENST00000483684 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 CELSR3Q9NYQ7 3312 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 RELNP78509 3460 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH1Q9P2D7 4330 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
COMMD3-213ENST00000483684 FLNBO75369 2602 aaKnown RBP0.55□□□□□ -2.32
COMMD3-213ENST00000483684 UNC79Q9P2D8 2635 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 ANKRD11Q6UB99 2663 aaPredicted RBP0.55□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH12Q6ZR08 3092 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH5Q8TE73 4624 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 CFAP47Q6ZTR5 3102 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
COMMD3-213ENST00000483684 MT1EP04732 61 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 DNAH6Q9C0G6 4158 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 SPTBN5Q9NRC6 3674 aaKnown RBP0.55□□□□□ -2.32
COMMD3-213ENST00000483684 ITPR2Q14571 2701 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 PDZD2O15018 2839 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 MYO9AB2RTY4 2548 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 MGAM2Q2M2H8 2515 aa0.55□□□□□ -2.32
COMMD3-213ENST00000483684 MKI67P46013 3256 aaKnown RBP0.55□□□□□ -2.32
COMMD3-213ENST00000483684 TACC2O95359 2948 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 BOD1L1Q8NFC6 3051 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 SPRR2EP22531 72 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 SPRR2GQ9BYE4 73 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 SZT2Q5T011 3432 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 VPS13AQ96RL7 3174 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 LAMA5O15230 3695 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 DYNC1H1Q14204 4646 aaKnown RBP0.54□□□□□ -2.32
COMMD3-213ENST00000483684 KALRNO60229 2985 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
COMMD3-213ENST00000483684 FREM2Q5SZK8 3169 aa0.53□□□□□ -2.32
COMMD3-213ENST00000483684 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
COMMD3-213ENST00000483684 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.33
COMMD3-213ENST00000483684 WDFY4Q6ZS81 3184 aa0.52□□□□□ -2.33
COMMD3-213ENST00000483684 CEP295Q9C0D2 2601 aa0.52□□□□□ -2.33
COMMD3-213ENST00000483684 HIVEP1P15822 2718 aa0.52□□□□□ -2.33
COMMD3-213ENST00000483684 CUBNO60494 3623 aa0.52□□□□□ -2.33
COMMD3-213ENST00000483684 SMG1Q96Q15 3661 aaKnown RBP0.52□□□□□ -2.33
COMMD3-213ENST00000483684 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
COMMD3-213ENST00000483684 FLGP20930 4061 aaPredicted RBP0.52□□□□□ -2.33
COMMD3-213ENST00000483684 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
COMMD3-213ENST00000483684 MAST4O15021 2626 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 TEP1Q99973 2627 aaKnown RBP0.51□□□□□ -2.33
COMMD3-213ENST00000483684 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
COMMD3-213ENST00000483684 FAT1Q14517 4588 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 MT1HP80294 61 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 MT1LQ93083 61 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 LOC400499M0QZD8 3231 aa0.51□□□□□ -2.33
COMMD3-213ENST00000483684 LAMA2P24043 3122 aaKnown RBP0.51□□□□□ -2.33
COMMD3-213ENST00000483684 PKHD1P08F94 4074 aa0.5□□□□□ -2.33
COMMD3-213ENST00000483684 DMDP11532 3685 aa0.5□□□□□ -2.33
COMMD3-213ENST00000483684 LAMA3Q16787 3333 aa0.5□□□□□ -2.33
COMMD3-213ENST00000483684 GOLGB1Q14789 3259 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms