RNA–Protein interactions for RNA: ENST00000483536.6

NOVA1-205, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 1 (best)

Gene NOVA1, Length 6,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-205ENST00000483536 SVEP1Q4LDE5 3571 aa2.66□□□□□ -1.98
NOVA1-205ENST00000483536 ZFHX3Q15911 3703 aa2.65□□□□□ -1.99
NOVA1-205ENST00000483536 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
NOVA1-205ENST00000483536 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
NOVA1-205ENST00000483536 VPS13CQ709C8 3753 aa2.63□□□□□ -1.99
NOVA1-205ENST00000483536 LCE5AQ5TCM9 118 aa2.62□□□□□ -1.99
NOVA1-205ENST00000483536 NBPF19A0A087WUL8 3843 aa2.59□□□□□ -1.99
NOVA1-205ENST00000483536 PRM1P04553 51 aa2.59□□□□□ -2
NOVA1-205ENST00000483536 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
NOVA1-205ENST00000483536 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
NOVA1-205ENST00000483536 FBN3Q75N90 2809 aa2.55□□□□□ -2
NOVA1-205ENST00000483536 ANK3Q12955 4377 aaKnown RBP2.54□□□□□ -2
NOVA1-205ENST00000483536 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
NOVA1-205ENST00000483536 AKAP9Q99996 3911 aa2.51□□□□□ -2.01
NOVA1-205ENST00000483536 COL7A1Q02388 2944 aa2.51□□□□□ -2.01
NOVA1-205ENST00000483536 CUBNO60494 3623 aa2.5□□□□□ -2.01
NOVA1-205ENST00000483536 TRRAPQ9Y4A5 3859 aa2.44□□□□□ -2.02
NOVA1-205ENST00000483536 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
NOVA1-205ENST00000483536 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
NOVA1-205ENST00000483536 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.02
NOVA1-205ENST00000483536 KRTAP9-7A8MTY7 169 aa2.4□□□□□ -2.02
NOVA1-205ENST00000483536 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
NOVA1-205ENST00000483536 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
NOVA1-205ENST00000483536 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
NOVA1-205ENST00000483536 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
NOVA1-205ENST00000483536 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
NOVA1-205ENST00000483536 KRTAP17-1Q9BYP8 105 aa2.33□□□□□ -2.04
NOVA1-205ENST00000483536 ALMS1Q8TCU4 4167 aa2.33□□□□□ -2.04
NOVA1-205ENST00000483536 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
NOVA1-205ENST00000483536 CMYA5Q8N3K9 4069 aa2.31□□□□□ -2.04
NOVA1-205ENST00000483536 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
NOVA1-205ENST00000483536 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
NOVA1-205ENST00000483536 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
NOVA1-205ENST00000483536 ANK2Q01484 3957 aa2.28□□□□□ -2.04
NOVA1-205ENST00000483536 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
NOVA1-205ENST00000483536 DNAH9Q9NYC9 4486 aa2.27□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
NOVA1-205ENST00000483536 SPRR2BP35325 72 aa2.25□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
NOVA1-205ENST00000483536 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
NOVA1-205ENST00000483536 SPRR2AP35326 72 aa2.23□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP9-3Q9BYQ3 159 aa2.23□□□□□ -2.05
NOVA1-205ENST00000483536 KRTAP9-8Q9BYQ0 159 aa2.22□□□□□ -2.05
NOVA1-205ENST00000483536 SPRR2DP22532 72 aa2.21□□□□□ -2.05
NOVA1-205ENST00000483536 LCE1DQ5T752 114 aa2.21□□□□□ -2.05
NOVA1-205ENST00000483536 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
NOVA1-205ENST00000483536 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
NOVA1-205ENST00000483536 PRKDCP78527 4128 aaKnown RBP2.2□□□□□ -2.06
NOVA1-205ENST00000483536 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
NOVA1-205ENST00000483536 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
NOVA1-205ENST00000483536 STARD9Q9P2P6 4700 aa2.18□□□□□ -2.06
NOVA1-205ENST00000483536 LYSTQ99698 3801 aa2.17□□□□□ -2.06
NOVA1-205ENST00000483536 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
NOVA1-205ENST00000483536 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
NOVA1-205ENST00000483536 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
NOVA1-205ENST00000483536 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
NOVA1-205ENST00000483536 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.06
NOVA1-205ENST00000483536 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.07
NOVA1-205ENST00000483536 RYR1P21817 5038 aa2.14□□□□□ -2.07
NOVA1-205ENST00000483536 KIAA1109Q2LD37 5005 aa2.13□□□□□ -2.07
NOVA1-205ENST00000483536 KMT2AQ03164 3969 aa2.13□□□□□ -2.07
NOVA1-205ENST00000483536 DNAH11Q96DT5 4516 aa2.12□□□□□ -2.07
NOVA1-205ENST00000483536 DNAH17Q9UFH2 4485 aa2.11□□□□□ -2.07
NOVA1-205ENST00000483536 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
NOVA1-205ENST00000483536 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
NOVA1-205ENST00000483536 FAT1Q14517 4588 aa2.1□□□□□ -2.07
NOVA1-205ENST00000483536 SPRR2FQ96RM1 72 aa2.09□□□□□ -2.07
NOVA1-205ENST00000483536 MT1GP13640 62 aa2.08□□□□□ -2.08
NOVA1-205ENST00000483536 KRTAP9-2Q9BYQ4 174 aa2.08□□□□□ -2.08
NOVA1-205ENST00000483536 DNAH6Q9C0G6 4158 aa2.07□□□□□ -2.08
NOVA1-205ENST00000483536 HECTD4Q9Y4D8 3996 aa2.07□□□□□ -2.08
NOVA1-205ENST00000483536 MT1LQ93083 61 aa2.07□□□□□ -2.08
NOVA1-205ENST00000483536 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
NOVA1-205ENST00000483536 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
NOVA1-205ENST00000483536 MT1AP04731 61 aa2.06□□□□□ -2.08
NOVA1-205ENST00000483536 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
NOVA1-205ENST00000483536 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
NOVA1-205ENST00000483536 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
NOVA1-205ENST00000483536 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
NOVA1-205ENST00000483536 RYR3Q15413 4870 aa2.04□□□□□ -2.08
NOVA1-205ENST00000483536 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
NOVA1-205ENST00000483536 KRTAP9-6A8MVA2 160 aa2.03□□□□□ -2.08
NOVA1-205ENST00000483536 FRAS1Q86XX4 4008 aa2.03□□□□□ -2.08
NOVA1-205ENST00000483536 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.09
NOVA1-205ENST00000483536 SPRR2EP22531 72 aa2.01□□□□□ -2.09
NOVA1-205ENST00000483536 PKD1P98161 4303 aa2.01□□□□□ -2.09
NOVA1-205ENST00000483536 RYR2Q92736 4967 aa2□□□□□ -2.09
NOVA1-205ENST00000483536 MYCBP2O75592 4640 aa1.99□□□□□ -2.09
NOVA1-205ENST00000483536 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
NOVA1-205ENST00000483536 PKHD1P08F94 4074 aa1.99□□□□□ -2.09
NOVA1-205ENST00000483536 HERC1Q15751 4861 aa1.98□□□□□ -2.09
NOVA1-205ENST00000483536 MT1HP80294 61 aa1.97□□□□□ -2.09
NOVA1-205ENST00000483536 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
NOVA1-205ENST00000483536 HERC2O95714 4834 aa1.97□□□□□ -2.09
NOVA1-205ENST00000483536 KRTAP19-1Q8IUB9 90 aa1.97□□□□□ -2.09
NOVA1-205ENST00000483536 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
NOVA1-205ENST00000483536 MT1EP04732 61 aa1.96□□□□□ -2.1
NOVA1-205ENST00000483536 MT2AP02795 61 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms