RNA–Protein interactions for RNA: ENST00000483536.6

NOVA1-205, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 1 (best)

Gene NOVA1, Length 6,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-205ENST00000483536 MYT1Q01538 1121 aa14.26□□□□□ -0.13
NOVA1-205ENST00000483536 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
NOVA1-205ENST00000483536 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
NOVA1-205ENST00000483536 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
NOVA1-205ENST00000483536 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
NOVA1-205ENST00000483536 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
NOVA1-205ENST00000483536 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
NOVA1-205ENST00000483536 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
NOVA1-205ENST00000483536 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
NOVA1-205ENST00000483536 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
NOVA1-205ENST00000483536 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
NOVA1-205ENST00000483536 POLR3GLQ9BT43 218 aa12.07□□□□□ -0.48
NOVA1-205ENST00000483536 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
NOVA1-205ENST00000483536 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
NOVA1-205ENST00000483536 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
NOVA1-205ENST00000483536 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
NOVA1-205ENST00000483536 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
NOVA1-205ENST00000483536 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
NOVA1-205ENST00000483536 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
NOVA1-205ENST00000483536 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
NOVA1-205ENST00000483536 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
NOVA1-205ENST00000483536 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
NOVA1-205ENST00000483536 NEFLP07196 543 aa11.76□□□□□ -0.53
NOVA1-205ENST00000483536 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
NOVA1-205ENST00000483536 FAM9AQ8IZU1 332 aaPredicted RBP11.75□□□□□ -0.53
NOVA1-205ENST00000483536 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
NOVA1-205ENST00000483536 ARXQ96QS3 562 aa11.67□□□□□ -0.54
NOVA1-205ENST00000483536 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
NOVA1-205ENST00000483536 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
NOVA1-205ENST00000483536 BCANQ96GW7 911 aa11.64□□□□□ -0.55
NOVA1-205ENST00000483536 CDK11BP21127 795 aaKnown RBP11.62□□□□□ -0.55
NOVA1-205ENST00000483536 CDK11AQ9UQ88 783 aaPredicted RBP11.62□□□□□ -0.55
NOVA1-205ENST00000483536 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
NOVA1-205ENST00000483536 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
NOVA1-205ENST00000483536 HMGB1P09429 215 aaKnown RBP11.55□□□□□ -0.56
NOVA1-205ENST00000483536 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.56
NOVA1-205ENST00000483536 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
NOVA1-205ENST00000483536 ZNF326Q5BKZ1 582 aaKnown RBP11.51□□□□□ -0.57
NOVA1-205ENST00000483536 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
NOVA1-205ENST00000483536 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
NOVA1-205ENST00000483536 APLP2Q06481 763 aa11.34□□□□□ -0.59
NOVA1-205ENST00000483536 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
NOVA1-205ENST00000483536 PTMSP20962 102 aa11.32□□□□□ -0.6
NOVA1-205ENST00000483536 NBR1Q14596 966 aa11.25□□□□□ -0.61
NOVA1-205ENST00000483536 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
NOVA1-205ENST00000483536 SLC4A1APQ9BWU0 796 aaKnown RBP11.21□□□□□ -0.61
NOVA1-205ENST00000483536 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.62
NOVA1-205ENST00000483536 ARID3AQ99856 593 aa11.2□□□□□ -0.62
NOVA1-205ENST00000483536 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
NOVA1-205ENST00000483536 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
NOVA1-205ENST00000483536 NCLP19338 710 aaKnown RBP11.15□□□□□ -0.63
NOVA1-205ENST00000483536 A0A0U1RQG5 324 aaPredicted RBP11.12□□□□□ -0.63
NOVA1-205ENST00000483536 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
NOVA1-205ENST00000483536 PDE4CQ08493 712 aa11.07□□□□□ -0.64
NOVA1-205ENST00000483536 ZBTB7CA1YPR0 619 aa11.06□□□□□ -0.64
NOVA1-205ENST00000483536 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
NOVA1-205ENST00000483536 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
NOVA1-205ENST00000483536 KCNA4P22459 653 aa11.01□□□□□ -0.65
NOVA1-205ENST00000483536 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
NOVA1-205ENST00000483536 PKNOX2Q96KN3 472 aa11□□□□□ -0.65
NOVA1-205ENST00000483536 TNNT2P45379 298 aaPredicted RBP11□□□□□ -0.65
NOVA1-205ENST00000483536 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
NOVA1-205ENST00000483536 NAP1L5Q96NT1 182 aaPredicted RBP11□□□□□ -0.65
NOVA1-205ENST00000483536 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
NOVA1-205ENST00000483536 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
NOVA1-205ENST00000483536 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
NOVA1-205ENST00000483536 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
NOVA1-205ENST00000483536 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
NOVA1-205ENST00000483536 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
NOVA1-205ENST00000483536 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
NOVA1-205ENST00000483536 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
NOVA1-205ENST00000483536 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
NOVA1-205ENST00000483536 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
NOVA1-205ENST00000483536 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
NOVA1-205ENST00000483536 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
NOVA1-205ENST00000483536 APPP05067 770 aa10.8□□□□□ -0.68
NOVA1-205ENST00000483536 CNGB1Q14028 1251 aaPredicted RBP10.79□□□□□ -0.68
NOVA1-205ENST00000483536 FKBP8Q14318 412 aa10.78□□□□□ -0.68
NOVA1-205ENST00000483536 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
NOVA1-205ENST00000483536 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
NOVA1-205ENST00000483536 PSMD1Q99460 953 aa10.76□□□□□ -0.69
NOVA1-205ENST00000483536 ANP32BQ92688 251 aaKnown RBP10.75□□□□□ -0.69
NOVA1-205ENST00000483536 PLCB2Q00722 1185 aa10.75□□□□□ -0.69
NOVA1-205ENST00000483536 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
NOVA1-205ENST00000483536 PTMAP06454 111 aaKnown RBP10.73□□□□□ -0.69
NOVA1-205ENST00000483536 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
NOVA1-205ENST00000483536 CCDC136Q96JN2 1154 aa10.68□□□□□ -0.7
NOVA1-205ENST00000483536 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
NOVA1-205ENST00000483536 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
NOVA1-205ENST00000483536 ERICH6BQ5W0A0 696 aa10.66□□□□□ -0.7
NOVA1-205ENST00000483536 PATL2C9JE40 543 aaKnown RBP10.63□□□□□ -0.71
NOVA1-205ENST00000483536 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
NOVA1-205ENST00000483536 NEFMP07197 916 aa10.59□□□□□ -0.71
NOVA1-205ENST00000483536 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
NOVA1-205ENST00000483536 CLSTN1O94985 981 aa10.58□□□□□ -0.72
NOVA1-205ENST00000483536 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
NOVA1-205ENST00000483536 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
NOVA1-205ENST00000483536 PLCD4Q9BRC7 762 aa10.54□□□□□ -0.72
NOVA1-205ENST00000483536 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
NOVA1-205ENST00000483536 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms