RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
CSDE1-206ENST00000483030 A0A087WVE0 104 aa3.73□□□□□ -1.81
CSDE1-206ENST00000483030 IGKV3D-7A0A0C4DH55 119 aa3.73□□□□□ -1.81
CSDE1-206ENST00000483030 CHKB-CPT1BH3BT56 60 aa3.73□□□□□ -1.81
CSDE1-206ENST00000483030 DNAL4O96015 105 aa3.73□□□□□ -1.81
CSDE1-206ENST00000483030 TRBV7-4A0A0J9YYF1 115 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 MT1FP04733 61 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 Q6ZQY7 126 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
CSDE1-206ENST00000483030 LOC101927531A0A1B0GV80 90 aa3.71□□□□□ -1.82
CSDE1-206ENST00000483030 A8MUU9 505 aa3.71□□□□□ -1.82
CSDE1-206ENST00000483030 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
CSDE1-206ENST00000483030 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
CSDE1-206ENST00000483030 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
CSDE1-206ENST00000483030 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
CSDE1-206ENST00000483030 OCR1Q9BZK8 76 aa3.7□□□□□ -1.82
CSDE1-206ENST00000483030 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
CSDE1-206ENST00000483030 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
CSDE1-206ENST00000483030 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
CSDE1-206ENST00000483030 A6NED7 52 aa3.67□□□□□ -1.82
CSDE1-206ENST00000483030 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
CSDE1-206ENST00000483030 ROMO1P60602 79 aa3.67□□□□□ -1.82
CSDE1-206ENST00000483030 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-206ENST00000483030 DSCR10P59022 87 aa3.66□□□□□ -1.82
CSDE1-206ENST00000483030 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
CSDE1-206ENST00000483030 A8MU10 97 aa3.65□□□□□ -1.83
CSDE1-206ENST00000483030 HRES1P13985 223 aa3.64□□□□□ -1.83
CSDE1-206ENST00000483030 NREPQ16612 68 aa3.64□□□□□ -1.83
CSDE1-206ENST00000483030 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
CSDE1-206ENST00000483030 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
CSDE1-206ENST00000483030 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
CSDE1-206ENST00000483030 A0A087WSZ3 146 aa3.63□□□□□ -1.83
CSDE1-206ENST00000483030 K7ERS5 55 aa3.63□□□□□ -1.83
CSDE1-206ENST00000483030 Q8N9P0 234 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-206ENST00000483030 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
CSDE1-206ENST00000483030 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
CSDE1-206ENST00000483030 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
CSDE1-206ENST00000483030 NDUFB1O75438 58 aa3.6□□□□□ -1.83
CSDE1-206ENST00000483030 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
CSDE1-206ENST00000483030 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
CSDE1-206ENST00000483030 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
CSDE1-206ENST00000483030 A0A1W2PNM2 257 aa3.58□□□□□ -1.84
CSDE1-206ENST00000483030 A8MWP4 228 aa3.58□□□□□ -1.84
CSDE1-206ENST00000483030 IGKV4-1P06312 121 aa3.58□□□□□ -1.84
CSDE1-206ENST00000483030 Q6ZQT0 140 aa3.58□□□□□ -1.84
CSDE1-206ENST00000483030 C14orf132Q9NPU4 83 aa3.58□□□□□ -1.84
CSDE1-206ENST00000483030 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
CSDE1-206ENST00000483030 ORMDL1Q9P0S3 153 aa3.57□□□□□ -1.84
CSDE1-206ENST00000483030 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
CSDE1-206ENST00000483030 H0YGX0 51 aa3.55□□□□□ -1.84
CSDE1-206ENST00000483030 BPY2O14599 106 aa3.55□□□□□ -1.84
CSDE1-206ENST00000483030 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
CSDE1-206ENST00000483030 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CSDE1-206ENST00000483030 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
CSDE1-206ENST00000483030 ZCCHC13Q8WW36 166 aaKnown RBP3.54□□□□□ -1.84
CSDE1-206ENST00000483030 SPINK7P58062 85 aa3.53□□□□□ -1.84
CSDE1-206ENST00000483030 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
CSDE1-206ENST00000483030 PDE6GP18545 87 aa3.52□□□□□ -1.85
CSDE1-206ENST00000483030 CSAG1Q6PB30 78 aa3.52□□□□□ -1.85
CSDE1-206ENST00000483030 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
CSDE1-206ENST00000483030 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
CSDE1-206ENST00000483030 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
CSDE1-206ENST00000483030 P0C880 135 aa3.49□□□□□ -1.85
CSDE1-206ENST00000483030 WFDC13Q8IUB5 93 aa3.49□□□□□ -1.85
CSDE1-206ENST00000483030 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
CSDE1-206ENST00000483030 H3BPC8 53 aa3.48□□□□□ -1.85
CSDE1-206ENST00000483030 H3BQ85 93 aa3.48□□□□□ -1.85
CSDE1-206ENST00000483030 NEBP20929 6669 aa3.47□□□□□ -1.85
CSDE1-206ENST00000483030 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
CSDE1-206ENST00000483030 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
CSDE1-206ENST00000483030 H0Y9P7 68 aa3.43□□□□□ -1.86
CSDE1-206ENST00000483030 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
CSDE1-206ENST00000483030 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
CSDE1-206ENST00000483030 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
CSDE1-206ENST00000483030 UQCR11O14957 56 aa3.4□□□□□ -1.87
CSDE1-206ENST00000483030 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
CSDE1-206ENST00000483030 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
CSDE1-206ENST00000483030 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-206ENST00000483030 MT1BP07438 61 aa3.36□□□□□ -1.87
CSDE1-206ENST00000483030 COA5Q86WW8 74 aa3.36□□□□□ -1.87
CSDE1-206ENST00000483030 IGKV2D-30A0A075B6S6 120 aa3.34□□□□□ -1.87
CSDE1-206ENST00000483030 Q5W150 140 aa3.34□□□□□ -1.87
CSDE1-206ENST00000483030 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
CSDE1-206ENST00000483030 MRPL34Q9BQ48 92 aaKnown RBP3.33□□□□□ -1.88
CSDE1-206ENST00000483030 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
CSDE1-206ENST00000483030 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
CSDE1-206ENST00000483030 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
CSDE1-206ENST00000483030 KMT2DO14686 5537 aa3.3□□□□□ -1.88
CSDE1-206ENST00000483030 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
CSDE1-206ENST00000483030 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
CSDE1-206ENST00000483030 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
CSDE1-206ENST00000483030 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
CSDE1-206ENST00000483030 A0A1B0GU33 70 aa3.27□□□□□ -1.89
CSDE1-206ENST00000483030 K7EQZ3 153 aa3.26□□□□□ -1.89
CSDE1-206ENST00000483030 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
CSDE1-206ENST00000483030 S4R3F8 94 aa3.24□□□□□ -1.89
CSDE1-206ENST00000483030 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CSDE1-206ENST00000483030 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms