RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 RPS27LQ71UM5 84 aaKnown RBP0.6□□□□□ -2.31
CLCC1-209ENST00000482889 CMC2Q9NRP2 79 aa0.6□□□□□ -2.31
CLCC1-209ENST00000482889 GCC2Q8IWJ2 1684 aa0.59□□□□□ -2.31
CLCC1-209ENST00000482889 RNF213Q63HN8 5207 aa0.59□□□□□ -2.31
CLCC1-209ENST00000482889 H0YGX0 51 aa0.59□□□□□ -2.31
CLCC1-209ENST00000482889 WNK2Q9Y3S1 2297 aa0.59□□□□□ -2.32
CLCC1-209ENST00000482889 PRKDCP78527 4128 aaKnown RBP0.59□□□□□ -2.32
CLCC1-209ENST00000482889 FAM208AQ9UK61 1670 aaKnown RBP0.59□□□□□ -2.32
CLCC1-209ENST00000482889 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.32
CLCC1-209ENST00000482889 DYNC2H1Q8NCM8 4307 aaKnown RBP0.57□□□□□ -2.32
CLCC1-209ENST00000482889 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
CLCC1-209ENST00000482889 TMEM167BQ9NRX6 74 aa0.57□□□□□ -2.32
CLCC1-209ENST00000482889 FSIP2Q5CZC0 6907 aa0.57□□□□□ -2.32
CLCC1-209ENST00000482889 GPR98Q8WXG9 6306 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 DNAH1Q9P2D7 4330 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 M0R2T5 61 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 PRM1P04553 51 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 WT1-ASQ06250 92 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 TFF3Q07654 80 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 DEFB106AQ8N104 65 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 HMCN2Q8NDA2 5059 aa0.56□□□□□ -2.32
CLCC1-209ENST00000482889 SSPOA2VEC9 5147 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 LYSTQ99698 3801 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 A0A1B0GUL6 1792 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 NBASA2RRP1 2371 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 DUOX1Q9NRD9 1551 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 ABRACLQ9P1F3 81 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 S4R3F8 94 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 CSPG4Q6UVK1 2322 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 ANKRD36CQ5JPF3 1778 aa0.55□□□□□ -2.32
CLCC1-209ENST00000482889 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 FAT2Q9NYQ8 4349 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
CLCC1-209ENST00000482889 ACANP16112 2415 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 SMIM27A0A1W2PRY6 76 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 PRLHP81277 87 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 TOMM5Q8N4H5 51 aa0.54□□□□□ -2.32
CLCC1-209ENST00000482889 TNXBP22105 4242 aa0.53□□□□□ -2.32
CLCC1-209ENST00000482889 CMYA5Q8N3K9 4069 aa0.53□□□□□ -2.32
CLCC1-209ENST00000482889 H0YGG7 62 aa0.53□□□□□ -2.32
CLCC1-209ENST00000482889 MACF1Q9UPN3 7388 aaKnown RBP0.53□□□□□ -2.32
CLCC1-209ENST00000482889 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
CLCC1-209ENST00000482889 HSPG2P98160 4391 aa0.53□□□□□ -2.32
CLCC1-209ENST00000482889 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
CLCC1-209ENST00000482889 NFAT5O94916 1531 aa0.53□□□□□ -2.33
CLCC1-209ENST00000482889 KMT2AQ03164 3969 aa0.53□□□□□ -2.33
CLCC1-209ENST00000482889 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.33
CLCC1-209ENST00000482889 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
CLCC1-209ENST00000482889 APC2O95996 2303 aa0.52□□□□□ -2.33
CLCC1-209ENST00000482889 SONP18583 2426 aaKnown RBP0.52□□□□□ -2.33
CLCC1-209ENST00000482889 DNAH9Q9NYC9 4486 aa0.51□□□□□ -2.33
CLCC1-209ENST00000482889 DYNC1H1Q14204 4646 aaKnown RBP0.51□□□□□ -2.33
CLCC1-209ENST00000482889 KAAG1Q9UBP8 84 aa0.51□□□□□ -2.33
CLCC1-209ENST00000482889 NEBP20929 6669 aa0.51□□□□□ -2.33
CLCC1-209ENST00000482889 MYCBP2O75592 4640 aa0.51□□□□□ -2.33
CLCC1-209ENST00000482889 PLECQ15149 4684 aaKnown RBP0.5□□□□□ -2.33
CLCC1-209ENST00000482889 ACACAQ13085 2346 aa0.5□□□□□ -2.33
CLCC1-209ENST00000482889 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
CLCC1-209ENST00000482889 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
CLCC1-209ENST00000482889 PKHD1P08F94 4074 aa0.49□□□□□ -2.33
CLCC1-209ENST00000482889 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
CLCC1-209ENST00000482889 DNAH7Q8WXX0 4024 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 LINC01546A6NGU7 62 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 LRP2P98164 4655 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 KRTAP20-1Q3LI63 56 aa0.48□□□□□ -2.33
CLCC1-209ENST00000482889 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
CLCC1-209ENST00000482889 DNAH10Q8IVF4 4471 aa0.47□□□□□ -2.33
CLCC1-209ENST00000482889 USH2AO75445 5202 aa0.47□□□□□ -2.33
CLCC1-209ENST00000482889 VPS13DQ5THJ4 4388 aa0.47□□□□□ -2.33
CLCC1-209ENST00000482889 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
CLCC1-209ENST00000482889 HRNRQ86YZ3 2850 aaPredicted RBP0.47□□□□□ -2.33
CLCC1-209ENST00000482889 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
CLCC1-209ENST00000482889 H3BUA1 57 aa0.46□□□□□ -2.34
CLCC1-209ENST00000482889 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
CLCC1-209ENST00000482889 KMT2DO14686 5537 aa0.46□□□□□ -2.34
CLCC1-209ENST00000482889 FAT1Q14517 4588 aa0.45□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH11Q96DT5 4516 aa0.45□□□□□ -2.34
CLCC1-209ENST00000482889 STARD9Q9P2P6 4700 aa0.45□□□□□ -2.34
CLCC1-209ENST00000482889 DSTQ03001 7570 aaKnown RBP0.45□□□□□ -2.34
CLCC1-209ENST00000482889 MUC12Q9UKN1 5478 aa0.45□□□□□ -2.34
CLCC1-209ENST00000482889 PKD1P98161 4303 aa0.45□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
CLCC1-209ENST00000482889 SMIM2Q9BVW6 85 aa0.44□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH6Q9C0G6 4158 aa0.43□□□□□ -2.34
CLCC1-209ENST00000482889 PKHD1L1Q86WI1 4243 aa0.43□□□□□ -2.34
CLCC1-209ENST00000482889 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH2Q9P225 4427 aa0.42□□□□□ -2.34
CLCC1-209ENST00000482889 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH3Q8TD57 4116 aa0.41□□□□□ -2.34
CLCC1-209ENST00000482889 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
CLCC1-209ENST00000482889 MUC5ACP98088 5654 aa0.4□□□□□ -2.34
CLCC1-209ENST00000482889 IGLV5-48A0A075B6I7 105 aa0.4□□□□□ -2.35
CLCC1-209ENST00000482889 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CLCC1-209ENST00000482889 H3BNG1 76 aa0.4□□□□□ -2.35
CLCC1-209ENST00000482889 LPAP08519 4548 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms