RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
DDR1-244ENST00000482873 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
DDR1-244ENST00000482873 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
DDR1-244ENST00000482873 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
DDR1-244ENST00000482873 HSPG2P98160 4391 aa8.08□□□□□ -1.12
DDR1-244ENST00000482873 KIAA1109Q2LD37 5005 aa8.08□□□□□ -1.12
DDR1-244ENST00000482873 TNXBP22105 4242 aa8.05□□□□□ -1.12
DDR1-244ENST00000482873 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
DDR1-244ENST00000482873 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
DDR1-244ENST00000482873 EPPK1P58107 5090 aaKnown RBP8.04□□□□□ -1.12
DDR1-244ENST00000482873 Q5VSD8 79 aa8.03□□□□□ -1.12
DDR1-244ENST00000482873 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
DDR1-244ENST00000482873 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
DDR1-244ENST00000482873 RYR1P21817 5038 aa7.96□□□□□ -1.14
DDR1-244ENST00000482873 K7ERS5 55 aa7.94□□□□□ -1.14
DDR1-244ENST00000482873 LPAP08519 4548 aa7.93□□□□□ -1.14
DDR1-244ENST00000482873 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
DDR1-244ENST00000482873 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
DDR1-244ENST00000482873 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
DDR1-244ENST00000482873 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
DDR1-244ENST00000482873 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
DDR1-244ENST00000482873 XP32Q5T750 250 aa7.83□□□□□ -1.16
DDR1-244ENST00000482873 LRP2P98164 4655 aa7.82□□□□□ -1.16
DDR1-244ENST00000482873 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
DDR1-244ENST00000482873 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
DDR1-244ENST00000482873 A0A0D9SG42 100 aa7.79□□□□□ -1.16
DDR1-244ENST00000482873 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.16
DDR1-244ENST00000482873 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
DDR1-244ENST00000482873 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
DDR1-244ENST00000482873 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
DDR1-244ENST00000482873 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
DDR1-244ENST00000482873 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
DDR1-244ENST00000482873 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
DDR1-244ENST00000482873 S4R3F8 94 aa7.64□□□□□ -1.19
DDR1-244ENST00000482873 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
DDR1-244ENST00000482873 HERC2O95714 4834 aa7.51□□□□□ -1.21
DDR1-244ENST00000482873 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
DDR1-244ENST00000482873 MUC2Q02817 5179 aa7.44□□□□□ -1.22
DDR1-244ENST00000482873 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
DDR1-244ENST00000482873 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
DDR1-244ENST00000482873 J3QL48 77 aa7.32□□□□□ -1.24
DDR1-244ENST00000482873 M0QZ58 72 aa7.32□□□□□ -1.24
DDR1-244ENST00000482873 PCLOQ9Y6V0 5065 aa7.31□□□□□ -1.24
DDR1-244ENST00000482873 HERC1Q15751 4861 aa7.31□□□□□ -1.24
DDR1-244ENST00000482873 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
DDR1-244ENST00000482873 MUC17Q685J3 4493 aa7.29□□□□□ -1.24
DDR1-244ENST00000482873 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
DDR1-244ENST00000482873 R4GN34 69 aa7.14□□□□□ -1.27
DDR1-244ENST00000482873 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
DDR1-244ENST00000482873 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
DDR1-244ENST00000482873 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
DDR1-244ENST00000482873 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
DDR1-244ENST00000482873 RNF213Q63HN8 5207 aa6.96□□□□□ -1.29
DDR1-244ENST00000482873 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.3
DDR1-244ENST00000482873 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
DDR1-244ENST00000482873 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
DDR1-244ENST00000482873 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
DDR1-244ENST00000482873 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
DDR1-244ENST00000482873 M0R2T5 61 aa6.66□□□□□ -1.34
DDR1-244ENST00000482873 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
DDR1-244ENST00000482873 TNP1P09430 55 aa6.56□□□□□ -1.36
DDR1-244ENST00000482873 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
DDR1-244ENST00000482873 MT1HP80294 61 aa6.5□□□□□ -1.37
DDR1-244ENST00000482873 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
DDR1-244ENST00000482873 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.37
DDR1-244ENST00000482873 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
DDR1-244ENST00000482873 INE1O15225 51 aa6.43□□□□□ -1.38
DDR1-244ENST00000482873 MT1FP04733 61 aa6.42□□□□□ -1.38
DDR1-244ENST00000482873 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
DDR1-244ENST00000482873 MT2AP02795 61 aa6.38□□□□□ -1.39
DDR1-244ENST00000482873 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
DDR1-244ENST00000482873 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
DDR1-244ENST00000482873 USH2AO75445 5202 aa6.21□□□□□ -1.41
DDR1-244ENST00000482873 MT1BP07438 61 aa6.13□□□□□ -1.43
DDR1-244ENST00000482873 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
DDR1-244ENST00000482873 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
DDR1-244ENST00000482873 MT1XP80297 61 aa6.07□□□□□ -1.44
DDR1-244ENST00000482873 KMT2DO14686 5537 aa6.04□□□□□ -1.44
DDR1-244ENST00000482873 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
DDR1-244ENST00000482873 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
DDR1-244ENST00000482873 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
DDR1-244ENST00000482873 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
DDR1-244ENST00000482873 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
DDR1-244ENST00000482873 LCE2BO14633 110 aa5.9□□□□□ -1.47
DDR1-244ENST00000482873 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
DDR1-244ENST00000482873 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
DDR1-244ENST00000482873 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
DDR1-244ENST00000482873 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
DDR1-244ENST00000482873 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
DDR1-244ENST00000482873 SSPOA2VEC9 5147 aa5.59□□□□□ -1.52
DDR1-244ENST00000482873 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
DDR1-244ENST00000482873 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
DDR1-244ENST00000482873 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
DDR1-244ENST00000482873 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
DDR1-244ENST00000482873 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
DDR1-244ENST00000482873 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
DDR1-244ENST00000482873 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
DDR1-244ENST00000482873 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
DDR1-244ENST00000482873 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
DDR1-244ENST00000482873 MT1EP04732 61 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms