RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.15
LCNL1-204ENST00000482657 MYCBP2O75592 4640 aa7.89□□□□□ -1.15
LCNL1-204ENST00000482657 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
LCNL1-204ENST00000482657 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
LCNL1-204ENST00000482657 FAT2Q9NYQ8 4349 aa7.86□□□□□ -1.15
LCNL1-204ENST00000482657 KRTAP21-3Q3LHN1 58 aa7.86□□□□□ -1.15
LCNL1-204ENST00000482657 NDUFAF8A1L188 74 aa7.82□□□□□ -1.16
LCNL1-204ENST00000482657 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
LCNL1-204ENST00000482657 PKD1P98161 4303 aa7.81□□□□□ -1.16
LCNL1-204ENST00000482657 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
LCNL1-204ENST00000482657 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
LCNL1-204ENST00000482657 J3QL48 77 aa7.78□□□□□ -1.16
LCNL1-204ENST00000482657 SACSQ9NZJ4 4579 aa7.75□□□□□ -1.17
LCNL1-204ENST00000482657 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
LCNL1-204ENST00000482657 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
LCNL1-204ENST00000482657 M0QZ58 72 aa7.72□□□□□ -1.17
LCNL1-204ENST00000482657 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
LCNL1-204ENST00000482657 R4GN34 69 aa7.7□□□□□ -1.18
LCNL1-204ENST00000482657 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
LCNL1-204ENST00000482657 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
LCNL1-204ENST00000482657 KMT2CQ8NEZ4 4911 aaKnown RBP7.64□□□□□ -1.19
LCNL1-204ENST00000482657 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
LCNL1-204ENST00000482657 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
LCNL1-204ENST00000482657 MT1HL1P0DM35 61 aa7.56□□□□□ -1.2
LCNL1-204ENST00000482657 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
LCNL1-204ENST00000482657 RYR1P21817 5038 aa7.51□□□□□ -1.21
LCNL1-204ENST00000482657 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
LCNL1-204ENST00000482657 KRTAP17-1Q9BYP8 105 aa7.5□□□□□ -1.21
LCNL1-204ENST00000482657 RYR3Q15413 4870 aa7.48□□□□□ -1.21
LCNL1-204ENST00000482657 RYR2Q92736 4967 aa7.48□□□□□ -1.21
LCNL1-204ENST00000482657 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
LCNL1-204ENST00000482657 HSPG2P98160 4391 aa7.43□□□□□ -1.22
LCNL1-204ENST00000482657 LRP2P98164 4655 aa7.42□□□□□ -1.22
LCNL1-204ENST00000482657 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
LCNL1-204ENST00000482657 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
LCNL1-204ENST00000482657 PKHD1L1Q86WI1 4243 aa7.35□□□□□ -1.23
LCNL1-204ENST00000482657 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
LCNL1-204ENST00000482657 LPAP08519 4548 aa7.24□□□□□ -1.25
LCNL1-204ENST00000482657 M0R2T5 61 aa7.23□□□□□ -1.25
LCNL1-204ENST00000482657 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
LCNL1-204ENST00000482657 TNXBP22105 4242 aa7.19□□□□□ -1.26
LCNL1-204ENST00000482657 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
LCNL1-204ENST00000482657 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
LCNL1-204ENST00000482657 A0A0A0MQY5 61 aa7.09□□□□□ -1.28
LCNL1-204ENST00000482657 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
LCNL1-204ENST00000482657 TNP1P09430 55 aa6.99□□□□□ -1.29
LCNL1-204ENST00000482657 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
LCNL1-204ENST00000482657 HERC2O95714 4834 aa6.94□□□□□ -1.3
LCNL1-204ENST00000482657 MUC2Q02817 5179 aa6.9□□□□□ -1.3
LCNL1-204ENST00000482657 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
LCNL1-204ENST00000482657 HERC1Q15751 4861 aa6.61□□□□□ -1.35
LCNL1-204ENST00000482657 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
LCNL1-204ENST00000482657 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
LCNL1-204ENST00000482657 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
LCNL1-204ENST00000482657 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
LCNL1-204ENST00000482657 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
LCNL1-204ENST00000482657 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
LCNL1-204ENST00000482657 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.38
LCNL1-204ENST00000482657 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
LCNL1-204ENST00000482657 MT1HP80294 61 aa6.36□□□□□ -1.39
LCNL1-204ENST00000482657 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
LCNL1-204ENST00000482657 MT1FP04733 61 aa6.33□□□□□ -1.4
LCNL1-204ENST00000482657 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
LCNL1-204ENST00000482657 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
LCNL1-204ENST00000482657 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
LCNL1-204ENST00000482657 MT2AP02795 61 aa6.3□□□□□ -1.4
LCNL1-204ENST00000482657 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
LCNL1-204ENST00000482657 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
LCNL1-204ENST00000482657 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
LCNL1-204ENST00000482657 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
LCNL1-204ENST00000482657 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
LCNL1-204ENST00000482657 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
LCNL1-204ENST00000482657 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
LCNL1-204ENST00000482657 MT1BP07438 61 aa5.99□□□□□ -1.45
LCNL1-204ENST00000482657 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
LCNL1-204ENST00000482657 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
LCNL1-204ENST00000482657 MT1XP80297 61 aa5.97□□□□□ -1.45
LCNL1-204ENST00000482657 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
LCNL1-204ENST00000482657 INE1O15225 51 aa5.96□□□□□ -1.46
LCNL1-204ENST00000482657 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
LCNL1-204ENST00000482657 USH2AO75445 5202 aa5.85□□□□□ -1.47
LCNL1-204ENST00000482657 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
LCNL1-204ENST00000482657 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
LCNL1-204ENST00000482657 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
LCNL1-204ENST00000482657 KMT2DO14686 5537 aa5.74□□□□□ -1.49
LCNL1-204ENST00000482657 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
LCNL1-204ENST00000482657 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
LCNL1-204ENST00000482657 LCE2BO14633 110 aa5.7□□□□□ -1.5
LCNL1-204ENST00000482657 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
LCNL1-204ENST00000482657 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
LCNL1-204ENST00000482657 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
LCNL1-204ENST00000482657 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
LCNL1-204ENST00000482657 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
LCNL1-204ENST00000482657 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
LCNL1-204ENST00000482657 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
LCNL1-204ENST00000482657 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
LCNL1-204ENST00000482657 MT1LQ93083 61 aa5.2□□□□□ -1.58
LCNL1-204ENST00000482657 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
LCNL1-204ENST00000482657 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
LCNL1-204ENST00000482657 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms