RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 H0YAA0 97 aa4.77□□□□□ -1.65
CALD1-220ENST00000482470 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
CALD1-220ENST00000482470 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
CALD1-220ENST00000482470 PKHD1P08F94 4074 aa4.71□□□□□ -1.65
CALD1-220ENST00000482470 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
CALD1-220ENST00000482470 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
CALD1-220ENST00000482470 R4GN34 69 aa4.69□□□□□ -1.66
CALD1-220ENST00000482470 ALMS1Q8TCU4 4167 aa4.69□□□□□ -1.66
CALD1-220ENST00000482470 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
CALD1-220ENST00000482470 M0QZ58 72 aa4.67□□□□□ -1.66
CALD1-220ENST00000482470 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
CALD1-220ENST00000482470 SACSQ9NZJ4 4579 aa4.64□□□□□ -1.67
CALD1-220ENST00000482470 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
CALD1-220ENST00000482470 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
CALD1-220ENST00000482470 APOBP04114 4563 aaKnown RBP4.61□□□□□ -1.67
CALD1-220ENST00000482470 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
CALD1-220ENST00000482470 FAT2Q9NYQ8 4349 aa4.61□□□□□ -1.67
CALD1-220ENST00000482470 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
CALD1-220ENST00000482470 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
CALD1-220ENST00000482470 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
CALD1-220ENST00000482470 RYR1P21817 5038 aa4.56□□□□□ -1.68
CALD1-220ENST00000482470 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
CALD1-220ENST00000482470 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
CALD1-220ENST00000482470 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
CALD1-220ENST00000482470 M0R2T5 61 aa4.54□□□□□ -1.68
CALD1-220ENST00000482470 PKD1P98161 4303 aa4.54□□□□□ -1.68
CALD1-220ENST00000482470 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
CALD1-220ENST00000482470 RYR3Q15413 4870 aa4.53□□□□□ -1.68
CALD1-220ENST00000482470 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
CALD1-220ENST00000482470 RYR2Q92736 4967 aa4.49□□□□□ -1.69
CALD1-220ENST00000482470 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
CALD1-220ENST00000482470 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
CALD1-220ENST00000482470 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
CALD1-220ENST00000482470 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
CALD1-220ENST00000482470 KRTAP12-1P59990 96 aa4.4□□□□□ -1.7
CALD1-220ENST00000482470 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.7
CALD1-220ENST00000482470 LRP2P98164 4655 aa4.39□□□□□ -1.71
CALD1-220ENST00000482470 HSPG2P98160 4391 aa4.37□□□□□ -1.71
CALD1-220ENST00000482470 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
CALD1-220ENST00000482470 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
CALD1-220ENST00000482470 LPAP08519 4548 aa4.28□□□□□ -1.72
CALD1-220ENST00000482470 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
CALD1-220ENST00000482470 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CALD1-220ENST00000482470 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
CALD1-220ENST00000482470 HERC2O95714 4834 aa4.23□□□□□ -1.73
CALD1-220ENST00000482470 TNXBP22105 4242 aa4.23□□□□□ -1.73
CALD1-220ENST00000482470 TNP1P09430 55 aa4.2□□□□□ -1.74
CALD1-220ENST00000482470 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
CALD1-220ENST00000482470 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.75
CALD1-220ENST00000482470 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
CALD1-220ENST00000482470 MUC2Q02817 5179 aa4.08□□□□□ -1.76
CALD1-220ENST00000482470 HERC1Q15751 4861 aa3.98□□□□□ -1.77
CALD1-220ENST00000482470 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
CALD1-220ENST00000482470 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
CALD1-220ENST00000482470 RNF213Q63HN8 5207 aa3.92□□□□□ -1.78
CALD1-220ENST00000482470 MT1HP80294 61 aa3.87□□□□□ -1.79
CALD1-220ENST00000482470 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
CALD1-220ENST00000482470 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
CALD1-220ENST00000482470 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
CALD1-220ENST00000482470 MT2AP02795 61 aa3.82□□□□□ -1.8
CALD1-220ENST00000482470 MT1FP04733 61 aa3.82□□□□□ -1.8
CALD1-220ENST00000482470 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
CALD1-220ENST00000482470 UBR4Q5T4S7 5183 aa3.81□□□□□ -1.8
CALD1-220ENST00000482470 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
CALD1-220ENST00000482470 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
CALD1-220ENST00000482470 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
CALD1-220ENST00000482470 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
CALD1-220ENST00000482470 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
CALD1-220ENST00000482470 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
CALD1-220ENST00000482470 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
CALD1-220ENST00000482470 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
CALD1-220ENST00000482470 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
CALD1-220ENST00000482470 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
CALD1-220ENST00000482470 LCE2BO14633 110 aa3.64□□□□□ -1.83
CALD1-220ENST00000482470 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
CALD1-220ENST00000482470 MT1BP07438 61 aa3.59□□□□□ -1.83
CALD1-220ENST00000482470 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
CALD1-220ENST00000482470 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
CALD1-220ENST00000482470 MT1XP80297 61 aa3.57□□□□□ -1.84
CALD1-220ENST00000482470 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
CALD1-220ENST00000482470 INE1O15225 51 aa3.53□□□□□ -1.84
CALD1-220ENST00000482470 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
CALD1-220ENST00000482470 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
CALD1-220ENST00000482470 USH2AO75445 5202 aa3.49□□□□□ -1.85
CALD1-220ENST00000482470 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
CALD1-220ENST00000482470 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
CALD1-220ENST00000482470 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
CALD1-220ENST00000482470 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
CALD1-220ENST00000482470 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
CALD1-220ENST00000482470 KMT2DO14686 5537 aa3.38□□□□□ -1.87
CALD1-220ENST00000482470 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
CALD1-220ENST00000482470 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
CALD1-220ENST00000482470 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
CALD1-220ENST00000482470 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
CALD1-220ENST00000482470 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
CALD1-220ENST00000482470 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
CALD1-220ENST00000482470 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
CALD1-220ENST00000482470 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
CALD1-220ENST00000482470 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
CALD1-220ENST00000482470 MT1GP13640 62 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms