RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ACYP1P07311 99 aa4.66□□□□□ -1.66
CPSF4-212ENST00000482251 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
CPSF4-212ENST00000482251 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
CPSF4-212ENST00000482251 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
CPSF4-212ENST00000482251 UQCRQO14949 82 aa4.63□□□□□ -1.67
CPSF4-212ENST00000482251 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
CPSF4-212ENST00000482251 A0A1B0GV90 55 aa4.6□□□□□ -1.67
CPSF4-212ENST00000482251 ATOX1O00244 68 aa4.6□□□□□ -1.67
CPSF4-212ENST00000482251 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
CPSF4-212ENST00000482251 NDUFC1O43677 76 aa4.59□□□□□ -1.67
CPSF4-212ENST00000482251 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
CPSF4-212ENST00000482251 J3QR89 54 aa4.57□□□□□ -1.68
CPSF4-212ENST00000482251 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
CPSF4-212ENST00000482251 LINC00208Q96KT6 92 aa4.57□□□□□ -1.68
CPSF4-212ENST00000482251 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
CPSF4-212ENST00000482251 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
CPSF4-212ENST00000482251 A8MUN3 132 aa4.52□□□□□ -1.69
CPSF4-212ENST00000482251 H0YAA0 97 aa4.52□□□□□ -1.69
CPSF4-212ENST00000482251 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
CPSF4-212ENST00000482251 MP68P56378 58 aa4.51□□□□□ -1.69
CPSF4-212ENST00000482251 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
CPSF4-212ENST00000482251 KMT2DO14686 5537 aa4.44□□□□□ -1.7
CPSF4-212ENST00000482251 P0C880 135 aa4.44□□□□□ -1.7
CPSF4-212ENST00000482251 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
CPSF4-212ENST00000482251 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
CPSF4-212ENST00000482251 SCGB1A1P11684 91 aa4.42□□□□□ -1.7
CPSF4-212ENST00000482251 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
CPSF4-212ENST00000482251 R4GN34 69 aa4.42□□□□□ -1.7
CPSF4-212ENST00000482251 K7ERU9 68 aa4.41□□□□□ -1.7
CPSF4-212ENST00000482251 MT1XP80297 61 aa4.41□□□□□ -1.7
CPSF4-212ENST00000482251 H3BPC8 53 aa4.4□□□□□ -1.71
CPSF4-212ENST00000482251 M0QZ58 72 aa4.4□□□□□ -1.71
CPSF4-212ENST00000482251 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
CPSF4-212ENST00000482251 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
CPSF4-212ENST00000482251 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CPSF4-212ENST00000482251 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
CPSF4-212ENST00000482251 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CPSF4-212ENST00000482251 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
CPSF4-212ENST00000482251 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
CPSF4-212ENST00000482251 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
CPSF4-212ENST00000482251 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
CPSF4-212ENST00000482251 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
CPSF4-212ENST00000482251 SPRR2EP22531 72 aa4.3□□□□□ -1.72
CPSF4-212ENST00000482251 SPRR2BP35325 72 aa4.3□□□□□ -1.72
CPSF4-212ENST00000482251 SPRR2AP35326 72 aa4.3□□□□□ -1.72
CPSF4-212ENST00000482251 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
CPSF4-212ENST00000482251 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
CPSF4-212ENST00000482251 ACYP2P14621 99 aa4.27□□□□□ -1.73
CPSF4-212ENST00000482251 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CPSF4-212ENST00000482251 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CPSF4-212ENST00000482251 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CPSF4-212ENST00000482251 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
CPSF4-212ENST00000482251 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
CPSF4-212ENST00000482251 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
CPSF4-212ENST00000482251 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
CPSF4-212ENST00000482251 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
CPSF4-212ENST00000482251 SPRR2DP22532 72 aa4.16□□□□□ -1.74
CPSF4-212ENST00000482251 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
CPSF4-212ENST00000482251 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
CPSF4-212ENST00000482251 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
CPSF4-212ENST00000482251 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
CPSF4-212ENST00000482251 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
CPSF4-212ENST00000482251 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
CPSF4-212ENST00000482251 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
CPSF4-212ENST00000482251 COA5Q86WW8 74 aa4.06□□□□□ -1.76
CPSF4-212ENST00000482251 A0A0D9SG42 100 aa4.03□□□□□ -1.76
CPSF4-212ENST00000482251 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
CPSF4-212ENST00000482251 COX7CP15954 63 aa4□□□□□ -1.77
CPSF4-212ENST00000482251 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
CPSF4-212ENST00000482251 SEC61GP60059 68 aa3.98□□□□□ -1.77
CPSF4-212ENST00000482251 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
CPSF4-212ENST00000482251 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
CPSF4-212ENST00000482251 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
CPSF4-212ENST00000482251 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
CPSF4-212ENST00000482251 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
CPSF4-212ENST00000482251 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CPSF4-212ENST00000482251 A0A1B0GU33 70 aa3.92□□□□□ -1.78
CPSF4-212ENST00000482251 H7BZZ5 65 aa3.92□□□□□ -1.78
CPSF4-212ENST00000482251 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
CPSF4-212ENST00000482251 MT1EP04732 61 aa3.91□□□□□ -1.78
CPSF4-212ENST00000482251 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
CPSF4-212ENST00000482251 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
CPSF4-212ENST00000482251 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
CPSF4-212ENST00000482251 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CPSF4-212ENST00000482251 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
CPSF4-212ENST00000482251 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
CPSF4-212ENST00000482251 A0A1B0GU69 56 aa3.84□□□□□ -1.79
CPSF4-212ENST00000482251 A8MU10 97 aa3.84□□□□□ -1.79
CPSF4-212ENST00000482251 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
CPSF4-212ENST00000482251 PCP4P48539 62 aa3.8□□□□□ -1.8
CPSF4-212ENST00000482251 TMEM258P61165 79 aa3.79□□□□□ -1.8
CPSF4-212ENST00000482251 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
CPSF4-212ENST00000482251 MT1GP13640 62 aa3.75□□□□□ -1.81
CPSF4-212ENST00000482251 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
CPSF4-212ENST00000482251 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
CPSF4-212ENST00000482251 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
CPSF4-212ENST00000482251 MT1MQ8N339 61 aa3.73□□□□□ -1.81
CPSF4-212ENST00000482251 MT1LQ93083 61 aa3.73□□□□□ -1.81
CPSF4-212ENST00000482251 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
CPSF4-212ENST00000482251 TNP1P09430 55 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms