RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
SQSTM1-207ENST00000481335 ACYP1P07311 99 aa5.39□□□□□ -1.55
SQSTM1-207ENST00000481335 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
SQSTM1-207ENST00000481335 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
SQSTM1-207ENST00000481335 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
SQSTM1-207ENST00000481335 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
SQSTM1-207ENST00000481335 ATOX1O00244 68 aa5.36□□□□□ -1.55
SQSTM1-207ENST00000481335 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
SQSTM1-207ENST00000481335 H0YAA0 97 aa5.34□□□□□ -1.55
SQSTM1-207ENST00000481335 UQCRQO14949 82 aa5.34□□□□□ -1.55
SQSTM1-207ENST00000481335 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
SQSTM1-207ENST00000481335 A8MUN3 132 aa5.31□□□□□ -1.56
SQSTM1-207ENST00000481335 H3BS24 57 aa5.31□□□□□ -1.56
SQSTM1-207ENST00000481335 NDUFC1O43677 76 aa5.31□□□□□ -1.56
SQSTM1-207ENST00000481335 A0A087WVE0 104 aa5.29□□□□□ -1.56
SQSTM1-207ENST00000481335 H0Y9P7 68 aa5.29□□□□□ -1.56
SQSTM1-207ENST00000481335 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
SQSTM1-207ENST00000481335 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
SQSTM1-207ENST00000481335 LINC00643Q86TS7 51 aa5.22□□□□□ -1.57
SQSTM1-207ENST00000481335 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
SQSTM1-207ENST00000481335 MP68P56378 58 aa5.19□□□□□ -1.58
SQSTM1-207ENST00000481335 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
SQSTM1-207ENST00000481335 LINC00208Q96KT6 92 aa5.19□□□□□ -1.58
SQSTM1-207ENST00000481335 KMT2DO14686 5537 aa5.16□□□□□ -1.58
SQSTM1-207ENST00000481335 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
SQSTM1-207ENST00000481335 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
SQSTM1-207ENST00000481335 A0A1B0GV90 55 aa5.15□□□□□ -1.59
SQSTM1-207ENST00000481335 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
SQSTM1-207ENST00000481335 H3BPC8 53 aa5.14□□□□□ -1.59
SQSTM1-207ENST00000481335 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SQSTM1-207ENST00000481335 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
SQSTM1-207ENST00000481335 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SQSTM1-207ENST00000481335 R4GN34 69 aa5.11□□□□□ -1.59
SQSTM1-207ENST00000481335 MT1XP80297 61 aa5.1□□□□□ -1.59
SQSTM1-207ENST00000481335 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
SQSTM1-207ENST00000481335 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
SQSTM1-207ENST00000481335 PCP4P48539 62 aa5.05□□□□□ -1.6
SQSTM1-207ENST00000481335 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
SQSTM1-207ENST00000481335 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
SQSTM1-207ENST00000481335 J3QR89 54 aa5.04□□□□□ -1.6
SQSTM1-207ENST00000481335 P0C880 135 aa5.04□□□□□ -1.6
SQSTM1-207ENST00000481335 M0QZ58 72 aa5.03□□□□□ -1.6
SQSTM1-207ENST00000481335 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
SQSTM1-207ENST00000481335 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
SQSTM1-207ENST00000481335 SCGB1A1P11684 91 aa5□□□□□ -1.61
SQSTM1-207ENST00000481335 SPRR2EP22531 72 aa4.99□□□□□ -1.61
SQSTM1-207ENST00000481335 SPRR2BP35325 72 aa4.99□□□□□ -1.61
SQSTM1-207ENST00000481335 SPRR2AP35326 72 aa4.99□□□□□ -1.61
SQSTM1-207ENST00000481335 ACYP2P14621 99 aa4.94□□□□□ -1.62
SQSTM1-207ENST00000481335 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
SQSTM1-207ENST00000481335 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
SQSTM1-207ENST00000481335 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
SQSTM1-207ENST00000481335 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SQSTM1-207ENST00000481335 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
SQSTM1-207ENST00000481335 SMIM20Q8N5G0 67 aa4.91□□□□□ -1.62
SQSTM1-207ENST00000481335 MT-ATP8P03928 68 aa4.87□□□□□ -1.63
SQSTM1-207ENST00000481335 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
SQSTM1-207ENST00000481335 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
SQSTM1-207ENST00000481335 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
SQSTM1-207ENST00000481335 SPRR2DP22532 72 aa4.84□□□□□ -1.63
SQSTM1-207ENST00000481335 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
SQSTM1-207ENST00000481335 CHKB-CPT1BH3BT56 60 aa4.83□□□□□ -1.64
SQSTM1-207ENST00000481335 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
SQSTM1-207ENST00000481335 K7ERU9 68 aa4.77□□□□□ -1.65
SQSTM1-207ENST00000481335 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
SQSTM1-207ENST00000481335 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
SQSTM1-207ENST00000481335 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
SQSTM1-207ENST00000481335 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
SQSTM1-207ENST00000481335 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
SQSTM1-207ENST00000481335 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
SQSTM1-207ENST00000481335 SEC61GP60059 68 aa4.59□□□□□ -1.67
SQSTM1-207ENST00000481335 COA5Q86WW8 74 aa4.59□□□□□ -1.67
SQSTM1-207ENST00000481335 SERP1Q9Y6X1 66 aa4.58□□□□□ -1.68
SQSTM1-207ENST00000481335 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
SQSTM1-207ENST00000481335 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
SQSTM1-207ENST00000481335 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
SQSTM1-207ENST00000481335 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
SQSTM1-207ENST00000481335 MT1EP04732 61 aa4.53□□□□□ -1.68
SQSTM1-207ENST00000481335 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
SQSTM1-207ENST00000481335 A0A0D9SG42 100 aa4.49□□□□□ -1.69
SQSTM1-207ENST00000481335 A0A1B0GU33 70 aa4.49□□□□□ -1.69
SQSTM1-207ENST00000481335 COX7CP15954 63 aa4.47□□□□□ -1.69
SQSTM1-207ENST00000481335 SPATA8Q6RVD6 105 aa4.47□□□□□ -1.69
SQSTM1-207ENST00000481335 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SQSTM1-207ENST00000481335 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
SQSTM1-207ENST00000481335 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
SQSTM1-207ENST00000481335 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SQSTM1-207ENST00000481335 H7BZZ5 65 aa4.43□□□□□ -1.7
SQSTM1-207ENST00000481335 MT1GP13640 62 aa4.43□□□□□ -1.7
SQSTM1-207ENST00000481335 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
SQSTM1-207ENST00000481335 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
SQSTM1-207ENST00000481335 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
SQSTM1-207ENST00000481335 A0A1B0GU69 56 aa4.38□□□□□ -1.71
SQSTM1-207ENST00000481335 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
SQSTM1-207ENST00000481335 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.72
SQSTM1-207ENST00000481335 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
SQSTM1-207ENST00000481335 MT1MQ8N339 61 aa4.31□□□□□ -1.72
SQSTM1-207ENST00000481335 MT1LQ93083 61 aa4.31□□□□□ -1.72
SQSTM1-207ENST00000481335 CCDC179H3BU77 68 aa4.3□□□□□ -1.72
SQSTM1-207ENST00000481335 TNP1P09430 55 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms