RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 SMR3BP02814 79 aaPredicted RBP7.35□□□□□ -1.23
NR1H3-220ENST00000481020 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
NR1H3-220ENST00000481020 S4R3F8 94 aa7.34□□□□□ -1.23
NR1H3-220ENST00000481020 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
NR1H3-220ENST00000481020 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
NR1H3-220ENST00000481020 P0C880 135 aa7.27□□□□□ -1.25
NR1H3-220ENST00000481020 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
NR1H3-220ENST00000481020 FAT1Q14517 4588 aa7.24□□□□□ -1.25
NR1H3-220ENST00000481020 A0A0D9SG42 100 aa7.24□□□□□ -1.25
NR1H3-220ENST00000481020 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
NR1H3-220ENST00000481020 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
NR1H3-220ENST00000481020 XP32Q5T750 250 aa7.19□□□□□ -1.26
NR1H3-220ENST00000481020 FLG2Q5D862 2391 aaPredicted RBP7.19□□□□□ -1.26
NR1H3-220ENST00000481020 M0QZ58 72 aa7.18□□□□□ -1.26
NR1H3-220ENST00000481020 HSPG2P98160 4391 aa7.16□□□□□ -1.26
NR1H3-220ENST00000481020 Q5VSD8 79 aa7.15□□□□□ -1.26
NR1H3-220ENST00000481020 RYR1P21817 5038 aa7.14□□□□□ -1.27
NR1H3-220ENST00000481020 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
NR1H3-220ENST00000481020 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
NR1H3-220ENST00000481020 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
NR1H3-220ENST00000481020 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
NR1H3-220ENST00000481020 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
NR1H3-220ENST00000481020 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
NR1H3-220ENST00000481020 KIAA1109Q2LD37 5005 aa7.05□□□□□ -1.28
NR1H3-220ENST00000481020 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
NR1H3-220ENST00000481020 DMBT1Q9UGM3 2413 aaPredicted RBP7.01□□□□□ -1.29
NR1H3-220ENST00000481020 TNXBP22105 4242 aa7□□□□□ -1.29
NR1H3-220ENST00000481020 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
NR1H3-220ENST00000481020 BIRC6Q9NR09 4857 aa6.96□□□□□ -1.3
NR1H3-220ENST00000481020 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
NR1H3-220ENST00000481020 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
NR1H3-220ENST00000481020 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
NR1H3-220ENST00000481020 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
NR1H3-220ENST00000481020 R4GN34 69 aa6.81□□□□□ -1.32
NR1H3-220ENST00000481020 HERC2O95714 4834 aa6.78□□□□□ -1.32
NR1H3-220ENST00000481020 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
NR1H3-220ENST00000481020 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
NR1H3-220ENST00000481020 PLAC4Q8WY50 150 aa6.71□□□□□ -1.34
NR1H3-220ENST00000481020 J3QL48 77 aa6.68□□□□□ -1.34
NR1H3-220ENST00000481020 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
NR1H3-220ENST00000481020 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.35
NR1H3-220ENST00000481020 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
NR1H3-220ENST00000481020 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
NR1H3-220ENST00000481020 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
NR1H3-220ENST00000481020 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
NR1H3-220ENST00000481020 LRP2P98164 4655 aa6.44□□□□□ -1.38
NR1H3-220ENST00000481020 LPAP08519 4548 aa6.44□□□□□ -1.38
NR1H3-220ENST00000481020 A0A0A0MQY5 61 aa6.42□□□□□ -1.38
NR1H3-220ENST00000481020 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
NR1H3-220ENST00000481020 TNP1P09430 55 aa6.36□□□□□ -1.39
NR1H3-220ENST00000481020 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
NR1H3-220ENST00000481020 HERC1Q15751 4861 aa6.33□□□□□ -1.4
NR1H3-220ENST00000481020 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
NR1H3-220ENST00000481020 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
NR1H3-220ENST00000481020 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
NR1H3-220ENST00000481020 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
NR1H3-220ENST00000481020 MUC2Q02817 5179 aa6.01□□□□□ -1.45
NR1H3-220ENST00000481020 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
NR1H3-220ENST00000481020 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
NR1H3-220ENST00000481020 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
NR1H3-220ENST00000481020 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
NR1H3-220ENST00000481020 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
NR1H3-220ENST00000481020 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
NR1H3-220ENST00000481020 INE1O15225 51 aa5.85□□□□□ -1.47
NR1H3-220ENST00000481020 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
NR1H3-220ENST00000481020 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
NR1H3-220ENST00000481020 MT1HP80294 61 aa5.79□□□□□ -1.48
NR1H3-220ENST00000481020 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
NR1H3-220ENST00000481020 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
NR1H3-220ENST00000481020 M0R2T5 61 aa5.75□□□□□ -1.49
NR1H3-220ENST00000481020 MT2AP02795 61 aa5.68□□□□□ -1.5
NR1H3-220ENST00000481020 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
NR1H3-220ENST00000481020 MT1FP04733 61 aa5.65□□□□□ -1.51
NR1H3-220ENST00000481020 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
NR1H3-220ENST00000481020 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
NR1H3-220ENST00000481020 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
NR1H3-220ENST00000481020 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
NR1H3-220ENST00000481020 MT1XP80297 61 aa5.59□□□□□ -1.51
NR1H3-220ENST00000481020 MT1BP07438 61 aa5.57□□□□□ -1.52
NR1H3-220ENST00000481020 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
NR1H3-220ENST00000481020 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
NR1H3-220ENST00000481020 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
NR1H3-220ENST00000481020 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.56
NR1H3-220ENST00000481020 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
NR1H3-220ENST00000481020 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
NR1H3-220ENST00000481020 LCE2BO14633 110 aa5.23□□□□□ -1.57
NR1H3-220ENST00000481020 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
NR1H3-220ENST00000481020 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
NR1H3-220ENST00000481020 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
NR1H3-220ENST00000481020 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
NR1H3-220ENST00000481020 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
NR1H3-220ENST00000481020 USH2AO75445 5202 aa5.06□□□□□ -1.6
NR1H3-220ENST00000481020 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
NR1H3-220ENST00000481020 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
NR1H3-220ENST00000481020 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
NR1H3-220ENST00000481020 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
NR1H3-220ENST00000481020 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
NR1H3-220ENST00000481020 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
NR1H3-220ENST00000481020 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
NR1H3-220ENST00000481020 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 891.3 ms