RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
HSPG2-209ENST00000480900 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
HSPG2-209ENST00000480900 MT1BP07438 61 aa7.62□□□□□ -1.19
HSPG2-209ENST00000480900 Q5VV11 94 aa7.62□□□□□ -1.19
HSPG2-209ENST00000480900 LINC00208Q96KT6 92 aa7.62□□□□□ -1.19
HSPG2-209ENST00000480900 OCR1Q9BZK8 76 aa7.62□□□□□ -1.19
HSPG2-209ENST00000480900 A8MUN3 132 aa7.61□□□□□ -1.19
HSPG2-209ENST00000480900 J3QR89 54 aa7.59□□□□□ -1.19
HSPG2-209ENST00000480900 NDUFC1O43677 76 aa7.59□□□□□ -1.19
HSPG2-209ENST00000480900 MP68P56378 58 aa7.59□□□□□ -1.19
HSPG2-209ENST00000480900 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
HSPG2-209ENST00000480900 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
HSPG2-209ENST00000480900 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
HSPG2-209ENST00000480900 H0YAA0 97 aa7.55□□□□□ -1.2
HSPG2-209ENST00000480900 A6NN06 94 aa7.52□□□□□ -1.21
HSPG2-209ENST00000480900 H3BPC8 53 aa7.5□□□□□ -1.21
HSPG2-209ENST00000480900 KRTAP6-3Q3LI67 103 aa7.47□□□□□ -1.21
HSPG2-209ENST00000480900 SCGB1A1P11684 91 aa7.45□□□□□ -1.22
HSPG2-209ENST00000480900 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
HSPG2-209ENST00000480900 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
HSPG2-209ENST00000480900 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
HSPG2-209ENST00000480900 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
HSPG2-209ENST00000480900 K7ERU9 68 aa7.3□□□□□ -1.24
HSPG2-209ENST00000480900 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
HSPG2-209ENST00000480900 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
HSPG2-209ENST00000480900 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
HSPG2-209ENST00000480900 P0C880 135 aa7.26□□□□□ -1.25
HSPG2-209ENST00000480900 R4GN34 69 aa7.25□□□□□ -1.25
HSPG2-209ENST00000480900 ACYP2P14621 99 aa7.21□□□□□ -1.26
HSPG2-209ENST00000480900 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
HSPG2-209ENST00000480900 M0QZ58 72 aa7.19□□□□□ -1.26
HSPG2-209ENST00000480900 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
HSPG2-209ENST00000480900 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
HSPG2-209ENST00000480900 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
HSPG2-209ENST00000480900 MT1XP80297 61 aa7.15□□□□□ -1.26
HSPG2-209ENST00000480900 NEBP20929 6669 aa7.15□□□□□ -1.27
HSPG2-209ENST00000480900 SPTSSBQ8NFR3 76 aa7.14□□□□□ -1.27
HSPG2-209ENST00000480900 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
HSPG2-209ENST00000480900 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
HSPG2-209ENST00000480900 CHKB-CPT1BH3BT56 60 aa7.06□□□□□ -1.28
HSPG2-209ENST00000480900 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
HSPG2-209ENST00000480900 SERP2Q8N6R1 65 aa7.03□□□□□ -1.28
HSPG2-209ENST00000480900 SPANXA2-OT1Q8N9U9 137 aa7.03□□□□□ -1.28
HSPG2-209ENST00000480900 KRTAP12-2P59991 146 aa7□□□□□ -1.29
HSPG2-209ENST00000480900 KMT2DO14686 5537 aa7□□□□□ -1.29
HSPG2-209ENST00000480900 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
HSPG2-209ENST00000480900 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
HSPG2-209ENST00000480900 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
HSPG2-209ENST00000480900 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
HSPG2-209ENST00000480900 SPRR2EP22531 72 aa6.82□□□□□ -1.32
HSPG2-209ENST00000480900 SPRR2BP35325 72 aa6.82□□□□□ -1.32
HSPG2-209ENST00000480900 SPRR2AP35326 72 aa6.82□□□□□ -1.32
HSPG2-209ENST00000480900 COA5Q86WW8 74 aa6.82□□□□□ -1.32
HSPG2-209ENST00000480900 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
HSPG2-209ENST00000480900 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
HSPG2-209ENST00000480900 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
HSPG2-209ENST00000480900 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
HSPG2-209ENST00000480900 COX7CP15954 63 aa6.79□□□□□ -1.32
HSPG2-209ENST00000480900 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
HSPG2-209ENST00000480900 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
HSPG2-209ENST00000480900 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
HSPG2-209ENST00000480900 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
HSPG2-209ENST00000480900 H7BZZ5 65 aa6.7□□□□□ -1.34
HSPG2-209ENST00000480900 SEC61GP60059 68 aa6.7□□□□□ -1.34
HSPG2-209ENST00000480900 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
HSPG2-209ENST00000480900 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
HSPG2-209ENST00000480900 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
HSPG2-209ENST00000480900 SPRR2DP22532 72 aa6.6□□□□□ -1.35
HSPG2-209ENST00000480900 A0A0D9SG42 100 aa6.57□□□□□ -1.36
HSPG2-209ENST00000480900 A0A1B0GU33 70 aa6.57□□□□□ -1.36
HSPG2-209ENST00000480900 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
HSPG2-209ENST00000480900 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
HSPG2-209ENST00000480900 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
HSPG2-209ENST00000480900 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
HSPG2-209ENST00000480900 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
HSPG2-209ENST00000480900 A0A1B0GU69 56 aa6.47□□□□□ -1.37
HSPG2-209ENST00000480900 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
HSPG2-209ENST00000480900 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
HSPG2-209ENST00000480900 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
HSPG2-209ENST00000480900 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
HSPG2-209ENST00000480900 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
HSPG2-209ENST00000480900 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
HSPG2-209ENST00000480900 MT1EP04732 61 aa6.34□□□□□ -1.39
HSPG2-209ENST00000480900 A8MU10 97 aa6.32□□□□□ -1.4
HSPG2-209ENST00000480900 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
HSPG2-209ENST00000480900 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
HSPG2-209ENST00000480900 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
HSPG2-209ENST00000480900 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
HSPG2-209ENST00000480900 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
HSPG2-209ENST00000480900 TMEM258P61165 79 aa6.2□□□□□ -1.42
HSPG2-209ENST00000480900 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
HSPG2-209ENST00000480900 TNP1P09430 55 aa6.16□□□□□ -1.42
HSPG2-209ENST00000480900 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
HSPG2-209ENST00000480900 MT1GP13640 62 aa6.14□□□□□ -1.43
HSPG2-209ENST00000480900 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
HSPG2-209ENST00000480900 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
HSPG2-209ENST00000480900 UQCR11O14957 56 aa6.08□□□□□ -1.44
HSPG2-209ENST00000480900 MT1LQ93083 61 aa6.07□□□□□ -1.44
HSPG2-209ENST00000480900 MT1MQ8N339 61 aa6.03□□□□□ -1.44
HSPG2-209ENST00000480900 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms