RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 A0A1B0GU33 70 aa4.71□□□□□ -1.66
SNRNP200-203ENST00000480242 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
SNRNP200-203ENST00000480242 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
SNRNP200-203ENST00000480242 KRTAP13-2Q52LG2 175 aa4.68□□□□□ -1.66
SNRNP200-203ENST00000480242 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
SNRNP200-203ENST00000480242 K7ERS5 55 aa4.66□□□□□ -1.66
SNRNP200-203ENST00000480242 RPS29P62273 56 aaKnown RBP4.66□□□□□ -1.66
SNRNP200-203ENST00000480242 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
SNRNP200-203ENST00000480242 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
SNRNP200-203ENST00000480242 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
SNRNP200-203ENST00000480242 KRTAP1-4P0C5Y4 121 aa4.62□□□□□ -1.67
SNRNP200-203ENST00000480242 Q5VSD8 79 aa4.62□□□□□ -1.67
SNRNP200-203ENST00000480242 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
SNRNP200-203ENST00000480242 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
SNRNP200-203ENST00000480242 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
SNRNP200-203ENST00000480242 A0A0D9SG42 100 aa4.55□□□□□ -1.68
SNRNP200-203ENST00000480242 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
SNRNP200-203ENST00000480242 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
SNRNP200-203ENST00000480242 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
SNRNP200-203ENST00000480242 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
SNRNP200-203ENST00000480242 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
SNRNP200-203ENST00000480242 J3QL48 77 aa4.51□□□□□ -1.69
SNRNP200-203ENST00000480242 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
SNRNP200-203ENST00000480242 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
SNRNP200-203ENST00000480242 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
SNRNP200-203ENST00000480242 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
SNRNP200-203ENST00000480242 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
SNRNP200-203ENST00000480242 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
SNRNP200-203ENST00000480242 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
SNRNP200-203ENST00000480242 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
SNRNP200-203ENST00000480242 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
SNRNP200-203ENST00000480242 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
SNRNP200-203ENST00000480242 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
SNRNP200-203ENST00000480242 S4R3F8 94 aa4.35□□□□□ -1.71
SNRNP200-203ENST00000480242 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
SNRNP200-203ENST00000480242 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
SNRNP200-203ENST00000480242 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
SNRNP200-203ENST00000480242 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
SNRNP200-203ENST00000480242 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
SNRNP200-203ENST00000480242 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
SNRNP200-203ENST00000480242 XP32Q5T750 250 aa4.25□□□□□ -1.73
SNRNP200-203ENST00000480242 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
SNRNP200-203ENST00000480242 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
SNRNP200-203ENST00000480242 HERC1Q15751 4861 aa4.18□□□□□ -1.74
SNRNP200-203ENST00000480242 LRP2P98164 4655 aa4.17□□□□□ -1.74
SNRNP200-203ENST00000480242 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
SNRNP200-203ENST00000480242 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
SNRNP200-203ENST00000480242 LPAP08519 4548 aa4.09□□□□□ -1.75
SNRNP200-203ENST00000480242 M0R2T5 61 aa4.09□□□□□ -1.75
SNRNP200-203ENST00000480242 M0QZ58 72 aa4.08□□□□□ -1.76
SNRNP200-203ENST00000480242 MUC2Q02817 5179 aa4.02□□□□□ -1.77
SNRNP200-203ENST00000480242 R4GN34 69 aa4.01□□□□□ -1.77
SNRNP200-203ENST00000480242 LCE2CQ5TA81 110 aa3.96□□□□□ -1.78
SNRNP200-203ENST00000480242 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
SNRNP200-203ENST00000480242 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
SNRNP200-203ENST00000480242 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
SNRNP200-203ENST00000480242 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
SNRNP200-203ENST00000480242 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
SNRNP200-203ENST00000480242 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
SNRNP200-203ENST00000480242 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
SNRNP200-203ENST00000480242 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
SNRNP200-203ENST00000480242 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
SNRNP200-203ENST00000480242 TNP1P09430 55 aa3.71□□□□□ -1.82
SNRNP200-203ENST00000480242 MT1HP80294 61 aa3.7□□□□□ -1.82
SNRNP200-203ENST00000480242 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
SNRNP200-203ENST00000480242 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
SNRNP200-203ENST00000480242 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
SNRNP200-203ENST00000480242 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
SNRNP200-203ENST00000480242 INE1O15225 51 aa3.65□□□□□ -1.82
SNRNP200-203ENST00000480242 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
SNRNP200-203ENST00000480242 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
SNRNP200-203ENST00000480242 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
SNRNP200-203ENST00000480242 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
SNRNP200-203ENST00000480242 MT2AP02795 61 aa3.52□□□□□ -1.85
SNRNP200-203ENST00000480242 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
SNRNP200-203ENST00000480242 MT1FP04733 61 aa3.49□□□□□ -1.85
SNRNP200-203ENST00000480242 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
SNRNP200-203ENST00000480242 USH2AO75445 5202 aa3.46□□□□□ -1.86
SNRNP200-203ENST00000480242 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
SNRNP200-203ENST00000480242 MT1BP07438 61 aa3.4□□□□□ -1.86
SNRNP200-203ENST00000480242 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
SNRNP200-203ENST00000480242 LCE2BO14633 110 aa3.34□□□□□ -1.87
SNRNP200-203ENST00000480242 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
SNRNP200-203ENST00000480242 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
SNRNP200-203ENST00000480242 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
SNRNP200-203ENST00000480242 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
SNRNP200-203ENST00000480242 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
SNRNP200-203ENST00000480242 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
SNRNP200-203ENST00000480242 MT1XP80297 61 aa3.27□□□□□ -1.89
SNRNP200-203ENST00000480242 KMT2DO14686 5537 aa3.26□□□□□ -1.89
SNRNP200-203ENST00000480242 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
SNRNP200-203ENST00000480242 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
SNRNP200-203ENST00000480242 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
SNRNP200-203ENST00000480242 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
SNRNP200-203ENST00000480242 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
SNRNP200-203ENST00000480242 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
SNRNP200-203ENST00000480242 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
SNRNP200-203ENST00000480242 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
SNRNP200-203ENST00000480242 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
SNRNP200-203ENST00000480242 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms