RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
USP11-208ENST00000480104 TRIAP1O43715 76 aa4.56□□□□□ -1.68
USP11-208ENST00000480104 CCKP06307 115 aa4.56□□□□□ -1.68
USP11-208ENST00000480104 ATXN8Q156A1 80 aa4.56□□□□□ -1.68
USP11-208ENST00000480104 A8MUN3 132 aa4.55□□□□□ -1.68
USP11-208ENST00000480104 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
USP11-208ENST00000480104 J3KT08 172 aa4.54□□□□□ -1.68
USP11-208ENST00000480104 H0YGX0 51 aa4.53□□□□□ -1.68
USP11-208ENST00000480104 NDUFB1O75438 58 aa4.53□□□□□ -1.68
USP11-208ENST00000480104 PDE6GP18545 87 aa4.52□□□□□ -1.69
USP11-208ENST00000480104 PRO0461Q9UI25 63 aa4.52□□□□□ -1.69
USP11-208ENST00000480104 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
USP11-208ENST00000480104 C9JAW5 83 aa4.5□□□□□ -1.69
USP11-208ENST00000480104 K7ERU9 68 aa4.5□□□□□ -1.69
USP11-208ENST00000480104 SNCGO76070 127 aa4.5□□□□□ -1.69
USP11-208ENST00000480104 A0A1B0GX51 115 aa4.49□□□□□ -1.69
USP11-208ENST00000480104 H3BT86 120 aa4.49□□□□□ -1.69
USP11-208ENST00000480104 J3QR89 54 aa4.49□□□□□ -1.69
USP11-208ENST00000480104 K7EQZ3 153 aa4.49□□□□□ -1.69
USP11-208ENST00000480104 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
USP11-208ENST00000480104 Q5W150 140 aa4.48□□□□□ -1.69
USP11-208ENST00000480104 DNAL4O96015 105 aa4.47□□□□□ -1.69
USP11-208ENST00000480104 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
USP11-208ENST00000480104 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
USP11-208ENST00000480104 H0YAA0 97 aa4.45□□□□□ -1.7
USP11-208ENST00000480104 H3BQ85 93 aa4.45□□□□□ -1.7
USP11-208ENST00000480104 NDUFS5O43920 106 aa4.45□□□□□ -1.7
USP11-208ENST00000480104 MT1EP04732 61 aa4.44□□□□□ -1.7
USP11-208ENST00000480104 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
USP11-208ENST00000480104 C1orf64Q8NEQ6 169 aa4.44□□□□□ -1.7
USP11-208ENST00000480104 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
USP11-208ENST00000480104 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
USP11-208ENST00000480104 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
USP11-208ENST00000480104 MMP24-AS1A0A0U1RRL7 71 aa4.41□□□□□ -1.7
USP11-208ENST00000480104 TMEM256-PLSCR3K7ERE1 68 aa4.41□□□□□ -1.7
USP11-208ENST00000480104 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
USP11-208ENST00000480104 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
USP11-208ENST00000480104 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
USP11-208ENST00000480104 ACYP1P07311 99 aa4.38□□□□□ -1.71
USP11-208ENST00000480104 C21orf62-AS1Q17RA5 79 aa4.36□□□□□ -1.71
USP11-208ENST00000480104 Q6ZQT0 140 aa4.35□□□□□ -1.71
USP11-208ENST00000480104 hDV103S1A0JD37 113 aa4.34□□□□□ -1.71
USP11-208ENST00000480104 MT1GP13640 62 aa4.33□□□□□ -1.72
USP11-208ENST00000480104 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
USP11-208ENST00000480104 A0A087WVE0 104 aa4.32□□□□□ -1.72
USP11-208ENST00000480104 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
USP11-208ENST00000480104 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
USP11-208ENST00000480104 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
USP11-208ENST00000480104 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
USP11-208ENST00000480104 LINC00643Q86TS7 51 aa4.29□□□□□ -1.72
USP11-208ENST00000480104 MT1MQ8N339 61 aa4.29□□□□□ -1.72
USP11-208ENST00000480104 SCGB1A1P11684 91 aa4.28□□□□□ -1.72
USP11-208ENST00000480104 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
USP11-208ENST00000480104 A0A1B0GW54 56 aa4.27□□□□□ -1.73
USP11-208ENST00000480104 MT-ATP8P03928 68 aa4.26□□□□□ -1.73
USP11-208ENST00000480104 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
USP11-208ENST00000480104 R4GN34 69 aa4.26□□□□□ -1.73
USP11-208ENST00000480104 UBL5Q9BZL1 73 aa4.25□□□□□ -1.73
USP11-208ENST00000480104 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
USP11-208ENST00000480104 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
USP11-208ENST00000480104 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
USP11-208ENST00000480104 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
USP11-208ENST00000480104 M0QZ58 72 aa4.2□□□□□ -1.74
USP11-208ENST00000480104 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
USP11-208ENST00000480104 PCP4P48539 62 aa4.19□□□□□ -1.74
USP11-208ENST00000480104 CXCL6P80162 114 aa4.19□□□□□ -1.74
USP11-208ENST00000480104 NREPQ16612 68 aa4.19□□□□□ -1.74
USP11-208ENST00000480104 NDUFC1O43677 76 aa4.15□□□□□ -1.75
USP11-208ENST00000480104 BPY2O14599 106 aa4.14□□□□□ -1.75
USP11-208ENST00000480104 HIST1H4AP62805 103 aaKnown RBP4.13□□□□□ -1.75
USP11-208ENST00000480104 ATOX1O00244 68 aa4.12□□□□□ -1.75
USP11-208ENST00000480104 P0C880 135 aa4.12□□□□□ -1.75
USP11-208ENST00000480104 ANAPC13Q9BS18 74 aa4.12□□□□□ -1.75
USP11-208ENST00000480104 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
USP11-208ENST00000480104 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
USP11-208ENST00000480104 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
USP11-208ENST00000480104 SMIM20Q8N5G0 67 aa4.09□□□□□ -1.75
USP11-208ENST00000480104 MT1LQ93083 61 aa4.09□□□□□ -1.75
USP11-208ENST00000480104 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
USP11-208ENST00000480104 UQCRQO14949 82 aa4.05□□□□□ -1.76
USP11-208ENST00000480104 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
USP11-208ENST00000480104 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
USP11-208ENST00000480104 COX7CP15954 63 aa4.04□□□□□ -1.76
USP11-208ENST00000480104 Q8N9L7 120 aa4.04□□□□□ -1.76
USP11-208ENST00000480104 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
USP11-208ENST00000480104 C20orf197Q8N268 126 aa4.03□□□□□ -1.76
USP11-208ENST00000480104 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
USP11-208ENST00000480104 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
USP11-208ENST00000480104 CCDC179H3BU77 68 aa4□□□□□ -1.77
USP11-208ENST00000480104 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
USP11-208ENST00000480104 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
USP11-208ENST00000480104 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
USP11-208ENST00000480104 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
USP11-208ENST00000480104 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
USP11-208ENST00000480104 H3BPC8 53 aa3.92□□□□□ -1.78
USP11-208ENST00000480104 MP68P56378 58 aa3.92□□□□□ -1.78
USP11-208ENST00000480104 TMEM258P61165 79 aa3.91□□□□□ -1.78
USP11-208ENST00000480104 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
USP11-208ENST00000480104 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
USP11-208ENST00000480104 H7BZZ5 65 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms