RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
LYSMD4-206ENST00000479791 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
LYSMD4-206ENST00000479791 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
LYSMD4-206ENST00000479791 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
LYSMD4-206ENST00000479791 S4R3F8 94 aa6.6□□□□□ -1.35
LYSMD4-206ENST00000479791 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
LYSMD4-206ENST00000479791 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
LYSMD4-206ENST00000479791 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
LYSMD4-206ENST00000479791 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
LYSMD4-206ENST00000479791 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
LYSMD4-206ENST00000479791 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
LYSMD4-206ENST00000479791 DYNC1H1Q14204 4646 aaKnown RBP6.5□□□□□ -1.37
LYSMD4-206ENST00000479791 FAT1Q14517 4588 aa6.49□□□□□ -1.37
LYSMD4-206ENST00000479791 XP32Q5T750 250 aa6.48□□□□□ -1.37
LYSMD4-206ENST00000479791 DNHD1Q96M86 4753 aa6.46□□□□□ -1.38
LYSMD4-206ENST00000479791 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
LYSMD4-206ENST00000479791 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
LYSMD4-206ENST00000479791 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
LYSMD4-206ENST00000479791 M0QZ58 72 aa6.42□□□□□ -1.38
LYSMD4-206ENST00000479791 HSPG2P98160 4391 aa6.37□□□□□ -1.39
LYSMD4-206ENST00000479791 TNXBP22105 4242 aa6.37□□□□□ -1.39
LYSMD4-206ENST00000479791 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
LYSMD4-206ENST00000479791 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
LYSMD4-206ENST00000479791 Q5VSD8 79 aa6.17□□□□□ -1.42
LYSMD4-206ENST00000479791 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
LYSMD4-206ENST00000479791 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
LYSMD4-206ENST00000479791 R4GN34 69 aa6.15□□□□□ -1.43
LYSMD4-206ENST00000479791 LPAP08519 4548 aa6.1□□□□□ -1.43
LYSMD4-206ENST00000479791 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
LYSMD4-206ENST00000479791 RYR2Q92736 4967 aa6.06□□□□□ -1.44
LYSMD4-206ENST00000479791 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
LYSMD4-206ENST00000479791 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
LYSMD4-206ENST00000479791 LRP2P98164 4655 aa6□□□□□ -1.45
LYSMD4-206ENST00000479791 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
LYSMD4-206ENST00000479791 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
LYSMD4-206ENST00000479791 RYR1P21817 5038 aa5.92□□□□□ -1.46
LYSMD4-206ENST00000479791 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
LYSMD4-206ENST00000479791 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
LYSMD4-206ENST00000479791 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
LYSMD4-206ENST00000479791 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
LYSMD4-206ENST00000479791 J3QL48 77 aa5.75□□□□□ -1.49
LYSMD4-206ENST00000479791 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
LYSMD4-206ENST00000479791 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
LYSMD4-206ENST00000479791 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
LYSMD4-206ENST00000479791 RYR3Q15413 4870 aa5.72□□□□□ -1.49
LYSMD4-206ENST00000479791 TNP1P09430 55 aa5.72□□□□□ -1.49
LYSMD4-206ENST00000479791 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
LYSMD4-206ENST00000479791 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
LYSMD4-206ENST00000479791 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
LYSMD4-206ENST00000479791 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
LYSMD4-206ENST00000479791 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
LYSMD4-206ENST00000479791 HERC1Q15751 4861 aa5.44□□□□□ -1.54
LYSMD4-206ENST00000479791 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
LYSMD4-206ENST00000479791 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.55
LYSMD4-206ENST00000479791 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
LYSMD4-206ENST00000479791 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
LYSMD4-206ENST00000479791 MUC2Q02817 5179 aa5.33□□□□□ -1.56
LYSMD4-206ENST00000479791 INE1O15225 51 aa5.32□□□□□ -1.56
LYSMD4-206ENST00000479791 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
LYSMD4-206ENST00000479791 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
LYSMD4-206ENST00000479791 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
LYSMD4-206ENST00000479791 BIRC6Q9NR09 4857 aa5.25□□□□□ -1.57
LYSMD4-206ENST00000479791 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
LYSMD4-206ENST00000479791 HERC2O95714 4834 aa5.19□□□□□ -1.58
LYSMD4-206ENST00000479791 M0R2T5 61 aa5.09□□□□□ -1.59
LYSMD4-206ENST00000479791 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
LYSMD4-206ENST00000479791 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.6
LYSMD4-206ENST00000479791 MT1FP04733 61 aa5.07□□□□□ -1.6
LYSMD4-206ENST00000479791 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
LYSMD4-206ENST00000479791 MT2AP02795 61 aa5.05□□□□□ -1.6
LYSMD4-206ENST00000479791 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
LYSMD4-206ENST00000479791 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
LYSMD4-206ENST00000479791 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
LYSMD4-206ENST00000479791 MT1HP80294 61 aa5.05□□□□□ -1.6
LYSMD4-206ENST00000479791 MT1XP80297 61 aa5.03□□□□□ -1.6
LYSMD4-206ENST00000479791 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
LYSMD4-206ENST00000479791 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
LYSMD4-206ENST00000479791 MT1BP07438 61 aa4.99□□□□□ -1.61
LYSMD4-206ENST00000479791 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
LYSMD4-206ENST00000479791 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
LYSMD4-206ENST00000479791 LCE2BO14633 110 aa4.88□□□□□ -1.63
LYSMD4-206ENST00000479791 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
LYSMD4-206ENST00000479791 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
LYSMD4-206ENST00000479791 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
LYSMD4-206ENST00000479791 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
LYSMD4-206ENST00000479791 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
LYSMD4-206ENST00000479791 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
LYSMD4-206ENST00000479791 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
LYSMD4-206ENST00000479791 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
LYSMD4-206ENST00000479791 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
LYSMD4-206ENST00000479791 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
LYSMD4-206ENST00000479791 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
LYSMD4-206ENST00000479791 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
LYSMD4-206ENST00000479791 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
LYSMD4-206ENST00000479791 KMT2DO14686 5537 aa4.46□□□□□ -1.7
LYSMD4-206ENST00000479791 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
LYSMD4-206ENST00000479791 MT1LQ93083 61 aa4.38□□□□□ -1.71
LYSMD4-206ENST00000479791 USH2AO75445 5202 aa4.33□□□□□ -1.72
LYSMD4-206ENST00000479791 MT1EP04732 61 aa4.32□□□□□ -1.72
LYSMD4-206ENST00000479791 KRTAP12-4P60329 112 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms